RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 NISCHQ9Y2I1 1504 aa44.15■■■■■ 4.66
PNN-202ENST00000553331 CCDC180Q9P1Z9 1646 aa39.43■■■■□ 3.9
PNN-202ENST00000553331 ABCC9O60706 1549 aa39.18■■■■□ 3.86
PNN-202ENST00000553331 RB1CC1Q8TDY2 1594 aa37.39■■■■□ 3.58
PNN-202ENST00000553331 DCAF8L2P0C7V8 631 aa37.32■■■■□ 3.56
PNN-202ENST00000553331 NACADO15069 1562 aa37.19■■■■□ 3.54
PNN-202ENST00000553331 MYO15BQ96JP2 1530 aa36.71■■■■□ 3.47
PNN-202ENST00000553331 ZCCHC6Q5VYS8 1495 aaKnown RBP36.66■■■■□ 3.46
PNN-202ENST00000553331 UNC13AQ9UPW8 1703 aa36.59■■■■□ 3.45
PNN-202ENST00000553331 PABPN1Q86U42 306 aaKnown RBP eCLIP36.57■■■■□ 3.444e-6■□□□□ 10.7
PNN-202ENST00000553331 DCAF1Q9Y4B6 1507 aa36.41■■■■□ 3.42
PNN-202ENST00000553331 DNAJC5BQ9UF47 199 aa36.37■■■■□ 3.41
PNN-202ENST00000553331 BICRAQ9NZM4 1560 aa36.27■■■■□ 3.4
PNN-202ENST00000553331 SCRIBQ14160 1630 aa36.08■■■■□ 3.37
PNN-202ENST00000553331 SHROOM4Q9ULL8 1493 aa35.72■■■■□ 3.31
PNN-202ENST00000553331 CC2D2AQ9P2K1 1620 aa35.38■■■■□ 3.25
PNN-202ENST00000553331 EIF4G1Q04637 1599 aaKnown RBP35.37■■■■□ 3.25
PNN-202ENST00000553331 CECR2Q9BXF3 1484 aa35.21■■■■□ 3.23
PNN-202ENST00000553331 SMARCA4P51532 1647 aa34.39■■■■□ 3.1
PNN-202ENST00000553331 NCAPD3P42695 1498 aa34.31■■■■□ 3.08
PNN-202ENST00000553331 ATAD2BQ9ULI0 1458 aa34.3■■■■□ 3.08
PNN-202ENST00000553331 BAZ1AQ9NRL2 1556 aaPredicted RBP34.25■■■■□ 3.07
PNN-202ENST00000553331 SMARCA2P51531 1590 aa34.23■■■■□ 3.07
PNN-202ENST00000553331 HMGXB3Q12766 1538 aa34.09■■■■□ 3.05
PNN-202ENST00000553331 MROH2BQ7Z745 1585 aa34.06■■■■□ 3.04
PNN-202ENST00000553331 BAZ1BQ9UIG0 1483 aaKnown RBP34.03■■■■□ 3.04
PNN-202ENST00000553331 PEG3Q9GZU2 1588 aa33.96■■■■□ 3.03
PNN-202ENST00000553331 ERCC6Q03468 1493 aa33.81■■■■□ 3
PNN-202ENST00000553331 NESP48681 1621 aa33.75■■■□□ 2.99
PNN-202ENST00000553331 WIZO95785 1651 aa33.72■■■□□ 2.99
PNN-202ENST00000553331 LAMC3Q9Y6N6 1575 aa33.51■■■□□ 2.95
PNN-202ENST00000553331 CUX2O14529 1486 aa33.5■■■□□ 2.95
PNN-202ENST00000553331 RSF1Q96T23 1441 aaPredicted RBP33.48■■■□□ 2.95
PNN-202ENST00000553331 KIF21AQ7Z4S6 1674 aa33.35■■■□□ 2.93
PNN-202ENST00000553331 PDS5BQ9NTI5 1447 aa33.33■■■□□ 2.93
PNN-202ENST00000553331 CADPSQ9ULU8 1353 aa33.33■■■□□ 2.93
PNN-202ENST00000553331 THOC2Q8NI27 1593 aaKnown RBP33.28■■■□□ 2.92
PNN-202ENST00000553331 TOP2AP11388 1531 aaKnown RBP33.26■■■□□ 2.91
PNN-202ENST00000553331 DNAJC5Q9H3Z4 198 aa33.09■■■□□ 2.89
PNN-202ENST00000553331 MRC2Q9UBG0 1479 aa33.02■■■□□ 2.88
PNN-202ENST00000553331 CFTRP13569 1480 aa33■■■□□ 2.87
PNN-202ENST00000553331 FANCD2Q9BXW9 1451 aa32.98■■■□□ 2.87
PNN-202ENST00000553331 CEP164Q9UPV0 1460 aa32.98■■■□□ 2.87
PNN-202ENST00000553331 CCDC88BA6NC98 1476 aa32.9■■■□□ 2.86
PNN-202ENST00000553331 WDR62O43379 1518 aa32.9■■■□□ 2.86
PNN-202ENST00000553331 PRDM2Q13029 1718 aa32.77■■■□□ 2.84
PNN-202ENST00000553331 URB2Q14146 1524 aaKnown RBP32.67■■■□□ 2.82
PNN-202ENST00000553331 SUPT5HO00267 1087 aaKnown RBP32.45■■■□□ 2.79
PNN-202ENST00000553331 TOPBP1Q92547 1522 aa32.39■■■□□ 2.78
PNN-202ENST00000553331 ABCC8Q09428 1581 aa32.31■■■□□ 2.76
PNN-202ENST00000553331 DNMBPQ6XZF7 1577 aa32.3■■■□□ 2.76
PNN-202ENST00000553331 IFT140Q96RY7 1462 aa32.29■■■□□ 2.76
PNN-202ENST00000553331 ZNF608Q9ULD9 1512 aaPredicted RBP32.23■■■□□ 2.75
PNN-202ENST00000553331 OSCARQ8IYS5 282 aa32.12■■■□□ 2.73
PNN-202ENST00000553331 POLA1P09884 1462 aaPredicted RBP32.08■■■□□ 2.73
PNN-202ENST00000553331 EIF4G3O43432 1585 aaKnown RBP32.07■■■□□ 2.72
PNN-202ENST00000553331 TARBP1Q13395 1621 aaKnown RBP32.05■■■□□ 2.72
PNN-202ENST00000553331 AQRO60306 1485 aaKnown RBP eCLIP32.01■■■□□ 2.713e-18■■■■■ 28.1
PNN-202ENST00000553331 RAD54L2Q9Y4B4 1467 aa32.01■■■□□ 2.71
PNN-202ENST00000553331 CUX1P39880 1505 aa31.99■■■□□ 2.71
PNN-202ENST00000553331 SOGA1O94964 1423 aa31.97■■■□□ 2.71
PNN-202ENST00000553331 FGD5Q6ZNL6 1462 aa31.96■■■□□ 2.71
PNN-202ENST00000553331 TRIM41Q8WV44 630 aa31.95■■■□□ 2.71
PNN-202ENST00000553331 TDRD9Q8NDG6 1382 aaKnown RBP31.88■■■□□ 2.69
PNN-202ENST00000553331 FBLN2P98095 1184 aa31.81■■■□□ 2.68
PNN-202ENST00000553331 CHD1O14646 1710 aa31.8■■■□□ 2.68
PNN-202ENST00000553331 WDR97A6NE52 1622 aa31.7■■■□□ 2.66
PNN-202ENST00000553331 SNAPC4Q5SXM2 1469 aa31.68■■■□□ 2.66
PNN-202ENST00000553331 RIMBP3CA6NJZ7 1639 aa31.66■■■□□ 2.66
PNN-202ENST00000553331 RIMBP3BA6NNM3 1639 aa31.66■■■□□ 2.66
PNN-202ENST00000553331 RIMBP3Q9UFD9 1639 aa31.66■■■□□ 2.66
PNN-202ENST00000553331 GRIN2BQ13224 1484 aa31.62■■■□□ 2.65
PNN-202ENST00000553331 WRNQ14191 1432 aaPredicted RBP eCLIP31.6■■■□□ 2.65
PNN-202ENST00000553331 GAPVD1Q14C86 1478 aa31.59■■■□□ 2.65
PNN-202ENST00000553331 CHMP7Q8WUX9 453 aaPredicted RBP31.58■■■□□ 2.65
PNN-202ENST00000553331 PBRM1Q86U86 1689 aa31.57■■■□□ 2.65
PNN-202ENST00000553331 ARHGEF11O15085 1522 aa31.57■■■□□ 2.64
PNN-202ENST00000553331 ABCA10Q8WWZ4 1543 aa31.57■■■□□ 2.64
PNN-202ENST00000553331 SYNJ1O43426 1573 aa31.56■■■□□ 2.64
PNN-202ENST00000553331 MAGI1Q96QZ7 1491 aaPredicted RBP31.56■■■□□ 2.64
PNN-202ENST00000553331 TOP2BQ02880 1626 aa31.56■■■□□ 2.64
PNN-202ENST00000553331 BIVM-ERCC5R4GMW8 1640 aa31.56■■■□□ 2.64
PNN-202ENST00000553331 ABCA5Q8WWZ7 1642 aa31.49■■■□□ 2.63
PNN-202ENST00000553331 SYNJ2O15056 1496 aa31.46■■■□□ 2.63
PNN-202ENST00000553331 CYB5RLQ6IPT4 315 aa31.39■■■□□ 2.62
PNN-202ENST00000553331 CLASP1Q7Z460 1538 aa31.36■■■□□ 2.61
PNN-202ENST00000553331 ARAP1Q96P48 1450 aa31.29■■■□□ 2.6
PNN-202ENST00000553331 ADAMTS12P58397 1594 aa31.26■■■□□ 2.59
PNN-202ENST00000553331 GRIN2AQ12879 1464 aa31.21■■■□□ 2.59
PNN-202ENST00000553331 ERICH3Q5RHP9 1530 aa31.19■■■□□ 2.58
PNN-202ENST00000553331 FHAD1B1AJZ9 1412 aa31.17■■■□□ 2.58
PNN-202ENST00000553331 CEP170Q5SW79 1584 aa31.1■■■□□ 2.57
PNN-202ENST00000553331 NUP160Q12769 1436 aa31.06■■■□□ 2.56
PNN-202ENST00000553331 TRHP20396 242 aaPredicted RBP30.97■■■□□ 2.55
PNN-202ENST00000553331 KIF27Q86VH2 1401 aa30.97■■■□□ 2.55
PNN-202ENST00000553331 ERCC6L2Q5T890 1561 aa30.96■■■□□ 2.55
PNN-202ENST00000553331 IGF1RP08069 1367 aa30.9■■■□□ 2.54
PNN-202ENST00000553331 SHROOM2Q13796 1616 aa30.88■■■□□ 2.53
PNN-202ENST00000553331 CUL7Q14999 1698 aa30.84■■■□□ 2.53
PNN-202ENST00000553331 JPH4Q96JJ6 628 aa30.82■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms