RNA–Protein interactions for RNA: ENST00000541910.6

REEP1-209, Transcript of receptor accessory protein 1, humanhuman

TSL 2 BASIC

Gene REEP1, Length 969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REEP1-209ENST00000541910 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
REEP1-209ENST00000541910 CCDC180Q9P1Z9 1646 aa38.32■■■■□ 3.73
REEP1-209ENST00000541910 ABCC9O60706 1549 aa37.05■■■■□ 3.52
REEP1-209ENST00000541910 ZCCHC6Q5VYS8 1495 aaKnown RBP36.31■■■■□ 3.4
REEP1-209ENST00000541910 DCAF8L2P0C7V8 631 aa36.21■■■■□ 3.39
REEP1-209ENST00000541910 DCAF1Q9Y4B6 1507 aa35.99■■■■□ 3.35
REEP1-209ENST00000541910 NACADO15069 1562 aa35.98■■■■□ 3.35
REEP1-209ENST00000541910 MYO15BQ96JP2 1530 aa35.96■■■■□ 3.35
REEP1-209ENST00000541910 RB1CC1Q8TDY2 1594 aa35.86■■■■□ 3.33
REEP1-209ENST00000541910 SCRIBQ14160 1630 aa35.04■■■■□ 3.2
REEP1-209ENST00000541910 UNC13AQ9UPW8 1703 aa34.95■■■■□ 3.18
REEP1-209ENST00000541910 PABPN1Q86U42 306 aaKnown RBP eCLIP34.79■■■■□ 3.16
REEP1-209ENST00000541910 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
REEP1-209ENST00000541910 SHROOM4Q9ULL8 1493 aa34.71■■■■□ 3.15
REEP1-209ENST00000541910 CECR2Q9BXF3 1484 aa33.82■■■■□ 3
REEP1-209ENST00000541910 EIF4G1Q04637 1599 aaKnown RBP33.79■■■■□ 3
REEP1-209ENST00000541910 BAZ1AQ9NRL2 1556 aaPredicted RBP33.64■■■□□ 2.98
REEP1-209ENST00000541910 DNAJC5BQ9UF47 199 aa33.58■■■□□ 2.97
REEP1-209ENST00000541910 SMARCA4P51532 1647 aa33.57■■■□□ 2.97
REEP1-209ENST00000541910 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.96
REEP1-209ENST00000541910 CC2D2AQ9P2K1 1620 aa33.51■■■□□ 2.96
REEP1-209ENST00000541910 RSF1Q96T23 1441 aaPredicted RBP33.36■■■□□ 2.93
REEP1-209ENST00000541910 ATAD2BQ9ULI0 1458 aa33.31■■■□□ 2.92
REEP1-209ENST00000541910 SMARCA2P51531 1590 aa33.27■■■□□ 2.92
REEP1-209ENST00000541910 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
REEP1-209ENST00000541910 NCAPD3P42695 1498 aa33.23■■■□□ 2.91
REEP1-209ENST00000541910 WIZO95785 1651 aa33.13■■■□□ 2.89
REEP1-209ENST00000541910 BAZ1BQ9UIG0 1483 aaKnown RBP33.05■■■□□ 2.88
REEP1-209ENST00000541910 HMGXB3Q12766 1538 aa33.05■■■□□ 2.88
REEP1-209ENST00000541910 SUPT5HO00267 1087 aaKnown RBP32.99■■■□□ 2.87
REEP1-209ENST00000541910 TOP2AP11388 1531 aaKnown RBP32.84■■■□□ 2.85
REEP1-209ENST00000541910 CCDC88BA6NC98 1476 aa32.5■■■□□ 2.79
REEP1-209ENST00000541910 CADPSQ9ULU8 1353 aa32.32■■■□□ 2.76
REEP1-209ENST00000541910 NESP48681 1621 aa32.22■■■□□ 2.75
REEP1-209ENST00000541910 CFTRP13569 1480 aa32.21■■■□□ 2.75
REEP1-209ENST00000541910 LAMC3Q9Y6N6 1575 aa32.2■■■□□ 2.75
REEP1-209ENST00000541910 PDS5BQ9NTI5 1447 aa32.04■■■□□ 2.72
REEP1-209ENST00000541910 ERCC6Q03468 1493 aa31.91■■■□□ 2.7
REEP1-209ENST00000541910 FANCD2Q9BXW9 1451 aa31.9■■■□□ 2.7
REEP1-209ENST00000541910 PRDM2Q13029 1718 aa31.84■■■□□ 2.69
REEP1-209ENST00000541910 CEP164Q9UPV0 1460 aa31.78■■■□□ 2.68
REEP1-209ENST00000541910 KIF21AQ7Z4S6 1674 aa31.76■■■□□ 2.68
REEP1-209ENST00000541910 MRC2Q9UBG0 1479 aa31.64■■■□□ 2.66
REEP1-209ENST00000541910 THOC2Q8NI27 1593 aaKnown RBP31.55■■■□□ 2.64
REEP1-209ENST00000541910 URB2Q14146 1524 aaKnown RBP31.53■■■□□ 2.64
REEP1-209ENST00000541910 ABCC8Q09428 1581 aa31.5■■■□□ 2.63
REEP1-209ENST00000541910 WDR62O43379 1518 aa31.49■■■□□ 2.63
REEP1-209ENST00000541910 WRNQ14191 1432 aaPredicted RBP eCLIP31.44■■■□□ 2.62
REEP1-209ENST00000541910 TOPBP1Q92547 1522 aa31.44■■■□□ 2.62
REEP1-209ENST00000541910 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
REEP1-209ENST00000541910 CUX1P39880 1505 aa31.39■■■□□ 2.62
REEP1-209ENST00000541910 CUX2O14529 1486 aa31.36■■■□□ 2.61
REEP1-209ENST00000541910 SYNJ1O43426 1573 aa31.27■■■□□ 2.6
REEP1-209ENST00000541910 TOP2BQ02880 1626 aa31.26■■■□□ 2.59
REEP1-209ENST00000541910 FGD5Q6ZNL6 1462 aa31.21■■■□□ 2.59
REEP1-209ENST00000541910 BIVM-ERCC5R4GMW8 1640 aa31.21■■■□□ 2.59
REEP1-209ENST00000541910 POLA1P09884 1462 aaPredicted RBP31.21■■■□□ 2.59
REEP1-209ENST00000541910 TRIM41Q8WV44 630 aa31.15■■■□□ 2.58
REEP1-209ENST00000541910 SOGA1O94964 1423 aa31.15■■■□□ 2.58
REEP1-209ENST00000541910 IFT140Q96RY7 1462 aa31.13■■■□□ 2.57
REEP1-209ENST00000541910 CHIC1Q5VXU3 224 aa31.11■■■□□ 2.57
REEP1-209ENST00000541910 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
REEP1-209ENST00000541910 TARBP1Q13395 1621 aaKnown RBP31.02■■■□□ 2.56
REEP1-209ENST00000541910 ABCA10Q8WWZ4 1543 aa30.95■■■□□ 2.55
REEP1-209ENST00000541910 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
REEP1-209ENST00000541910 TDRD9Q8NDG6 1382 aaKnown RBP30.9■■■□□ 2.54
REEP1-209ENST00000541910 AQRO60306 1485 aaKnown RBP eCLIP30.85■■■□□ 2.53
REEP1-209ENST00000541910 WDR97A6NE52 1622 aa30.84■■■□□ 2.53
REEP1-209ENST00000541910 GAPVD1Q14C86 1478 aa30.76■■■□□ 2.52
REEP1-209ENST00000541910 EIF4G3O43432 1585 aaKnown RBP30.76■■■□□ 2.52
REEP1-209ENST00000541910 KIF27Q86VH2 1401 aa30.75■■■□□ 2.51
REEP1-209ENST00000541910 ABCA5Q8WWZ7 1642 aa30.72■■■□□ 2.51
REEP1-209ENST00000541910 GRIN2BQ13224 1484 aa30.69■■■□□ 2.5
REEP1-209ENST00000541910 RUSC2Q8N2Y8 1516 aa30.62■■■□□ 2.49
REEP1-209ENST00000541910 IGF1RP08069 1367 aa30.59■■■□□ 2.49
REEP1-209ENST00000541910 ERICH3Q5RHP9 1530 aa30.57■■■□□ 2.49
REEP1-209ENST00000541910 SNAPC4Q5SXM2 1469 aa30.55■■■□□ 2.48
REEP1-209ENST00000541910 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
REEP1-209ENST00000541910 EEA1Q15075 1411 aa30.54■■■□□ 2.48
REEP1-209ENST00000541910 MAGI1Q96QZ7 1491 aaPredicted RBP30.53■■■□□ 2.48
REEP1-209ENST00000541910 FAM9AQ8IZU1 332 aaPredicted RBP30.47■■■□□ 2.47
REEP1-209ENST00000541910 CSRNP3Q8WYN3 585 aa30.47■■■□□ 2.47
REEP1-209ENST00000541910 FHAD1B1AJZ9 1412 aa30.44■■■□□ 2.46
REEP1-209ENST00000541910 CHMP7Q8WUX9 453 aaPredicted RBP30.43■■■□□ 2.46
REEP1-209ENST00000541910 FBLN2P98095 1184 aa30.42■■■□□ 2.46
REEP1-209ENST00000541910 CARMIL1Q5VZK9 1371 aa30.41■■■□□ 2.46
REEP1-209ENST00000541910 SYNJ2O15056 1496 aa30.41■■■□□ 2.46
REEP1-209ENST00000541910 ADAMTS12P58397 1594 aa30.39■■■□□ 2.46
REEP1-209ENST00000541910 CUL7Q14999 1698 aa30.36■■■□□ 2.45
REEP1-209ENST00000541910 PRXQ9BXM0 1461 aa30.29■■■□□ 2.44
REEP1-209ENST00000541910 GRIN2AQ12879 1464 aa30.26■■■□□ 2.44
REEP1-209ENST00000541910 RAPGEF2Q9Y4G8 1499 aa30.26■■■□□ 2.44
REEP1-209ENST00000541910 OSCARQ8IYS5 282 aa30.26■■■□□ 2.43
REEP1-209ENST00000541910 CHD1O14646 1710 aa30.23■■■□□ 2.43
REEP1-209ENST00000541910 NUP160Q12769 1436 aa30.13■■■□□ 2.41
REEP1-209ENST00000541910 KIF21BO75037 1637 aa30.11■■■□□ 2.41
REEP1-209ENST00000541910 CEP170Q5SW79 1584 aa30.07■■■□□ 2.4
REEP1-209ENST00000541910 EHMT2Q96KQ7 1210 aa30.02■■■□□ 2.4
REEP1-209ENST00000541910 GOLGA3Q08378 1498 aa30.01■■■□□ 2.4
REEP1-209ENST00000541910 KIAA0586Q9BVV6 1533 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms