Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.848e-10■□□□□ 9.1
SUB1P53999 CCNB1IP1-205ENST00000398169 1631 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.038e-10■□□□□ 9.1
SUB1P53999 CCNB1IP1-203ENST00000398160 1613 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.058e-10■□□□□ 9.1
SUB1P53999 CCNB1IP1-204ENST00000398163 1604 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.168e-10■□□□□ 9.1
SUB1P53999 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.238e-10■□□□□ 9.1
SUB1P53999 CCNB1IP1-201ENST00000353689 1305 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.328e-10■□□□□ 9.1
SUB1P53999 GTSF1-207ENST00000552336 520 ntTSL 32.12□□□□□ -2.078e-10■□□□□ 9.1
SUB1P53999 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.1■□□□□ 0.332e-8■□□□□ 9.1
SUB1P53999 SLC25A39-206ENST00000585695 1121 ntTSL 217.1■□□□□ 0.332e-8■□□□□ 9.1
SUB1P53999 SLC25A39-210ENST00000588315 1409 ntTSL 215.7■□□□□ 0.12e-8■□□□□ 9.1
SUB1P53999 SLC25A39-217ENST00000593166 797 ntTSL 312.08□□□□□ -0.482e-8■□□□□ 9.1
SUB1P53999 SLC25A39-211ENST00000588767 807 ntTSL 511.4□□□□□ -0.582e-8■□□□□ 9.1
SUB1P53999 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC10.28□□□□□ -0.762e-8■□□□□ 9.1
SUB1P53999 SRCAP-205ENST00000483083 5937 ntTSL 29.69□□□□□ -0.862e-8■□□□□ 9.1
SUB1P53999 HLTF-202ENST00000392912 3896 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.062e-8■□□□□ 9.1
SUB1P53999 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC7.58□□□□□ -1.22e-8■□□□□ 9.1
SUB1P53999 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.252e-8■□□□□ 9.1
SUB1P53999 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.252e-8■□□□□ 9.1
SUB1P53999 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.345e-7■□□□□ 9.1
SUB1P53999 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.639e-8■□□□□ 9.1
SUB1P53999 SARS-202ENST00000369923 1882 ntTSL 5 BASIC10.94□□□□□ -0.669e-8■□□□□ 9.1
SUB1P53999 SARS-203ENST00000468588 1582 ntTSL 23.68□□□□□ -1.829e-8■□□□□ 9.1
SUB1P53999 RPL8-214ENST00000534781 716 ntTSL 210.78□□□□□ -0.684e-21■□□□□ 9.1
SUB1P53999 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.615e-16■□□□□ 9
SUB1P53999 UBA52-212ENST00000599256 927 ntTSL 217.63■□□□□ 0.415e-16■□□□□ 9
SUB1P53999 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.175e-16■□□□□ 9
SUB1P53999 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.482e-8■□□□□ 9
SUB1P53999 UBA52-211ENST00000598814 550 ntTSL 1 (best)11.14□□□□□ -0.635e-16■□□□□ 9
SUB1P53999 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC10.02□□□□□ -0.815e-16■□□□□ 9
SUB1P53999 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.825e-16■□□□□ 9
SUB1P53999 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.025e-16■□□□□ 9
SUB1P53999 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.085e-16■□□□□ 9
SUB1P53999 UBA52-207ENST00000596273 764 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.135e-16■□□□□ 9
SUB1P53999 UBA52-201ENST00000430157 572 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.195e-16■□□□□ 9
SUB1P53999 UBA52-205ENST00000595683 779 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.265e-16■□□□□ 9
SUB1P53999 CCT5-208ENST00000510326 567 ntTSL 24.53□□□□□ -1.682e-8■□□□□ 9
SUB1P53999 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.735e-16■□□□□ 9
SUB1P53999 UBA52-203ENST00000594527 357 ntTSL 34.12□□□□□ -1.755e-16■□□□□ 9
SUB1P53999 UBA52-206ENST00000596272 508 ntTSL 23.57□□□□□ -1.845e-16■□□□□ 9
SUB1P53999 AP002990.1-201ENST00000526409 1954 ntTSL 513.76□□□□□ -0.211e-8■□□□□ 9
SUB1P53999 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.311e-8■□□□□ 9
SUB1P53999 EEF1G-203ENST00000525340 2496 ntTSL 1 (best)12.12□□□□□ -0.471e-8■□□□□ 9
SUB1P53999 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.81e-8■□□□□ 9
SUB1P53999 INTS8-204ENST00000519457 581 ntTSL 518.62■□□□□ 0.574e-7■□□□□ 9
SUB1P53999 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.364e-7■□□□□ 9
SUB1P53999 INTS8-203ENST00000519053 569 ntTSL 417.13■□□□□ 0.334e-7■□□□□ 9
SUB1P53999 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.63■□□□□ 0.094e-7■□□□□ 9
SUB1P53999 GARS-206ENST00000478124 1877 ntTSL 514.74□□□□□ -0.054e-7■□□□□ 9
SUB1P53999 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.054e-7■□□□□ 9
SUB1P53999 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.73□□□□□ -0.054e-7■□□□□ 9
SUB1P53999 INTS8-220ENST00000524333 3272 ntTSL 213.86□□□□□ -0.194e-7■□□□□ 9
SUB1P53999 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.24e-7■□□□□ 9
SUB1P53999 INTS8-215ENST00000523321 2916 ntTSL 213.7□□□□□ -0.224e-7■□□□□ 9
SUB1P53999 JPT2-213ENST00000569256 911 ntTSL 1 (best)13.62□□□□□ -0.234e-7■□□□□ 9
SUB1P53999 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.254e-7■□□□□ 9
SUB1P53999 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.34e-7■□□□□ 9
SUB1P53999 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.314e-7■□□□□ 9
SUB1P53999 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.324e-7■□□□□ 9
SUB1P53999 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.354e-7■□□□□ 9
SUB1P53999 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.424e-7■□□□□ 9
SUB1P53999 RPS15A-209ENST00000573554 606 ntTSL 1 (best)12.38□□□□□ -0.434e-7■□□□□ 9
SUB1P53999 JPT2-209ENST00000566742 593 ntTSL 412.11□□□□□ -0.474e-7■□□□□ 9
SUB1P53999 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.494e-7■□□□□ 9
SUB1P53999 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.574e-7■□□□□ 9
SUB1P53999 JPT2-214ENST00000569765 782 ntTSL 2 BASIC11.29□□□□□ -0.64e-7■□□□□ 9
SUB1P53999 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.684e-7■□□□□ 9
SUB1P53999 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.734e-7■□□□□ 9
SUB1P53999 TRIM28-211ENST00000597968 504 ntTSL 210.05□□□□□ -0.85e-7■□□□□ 9
SUB1P53999 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.814e-7■□□□□ 9
SUB1P53999 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC9.96□□□□□ -0.824e-7■□□□□ 9
SUB1P53999 INTS8-218ENST00000523808 597 ntTSL 49.68□□□□□ -0.864e-7■□□□□ 9
SUB1P53999 JPT2-201ENST00000248098 3718 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.884e-7■□□□□ 9
SUB1P53999 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.94e-7■□□□□ 9
SUB1P53999 JPT2-202ENST00000382710 962 ntTSL 2 BASIC8.85□□□□□ -0.994e-7■□□□□ 9
SUB1P53999 JPT2-203ENST00000382711 894 ntTSL 4 BASIC8.69□□□□□ -1.024e-7■□□□□ 9
SUB1P53999 MYL4-207ENST00000572303 544 ntTSL 38.42□□□□□ -1.064e-7■□□□□ 9
SUB1P53999 MYL4-205ENST00000570772 582 ntTSL 37.81□□□□□ -1.164e-7■□□□□ 9
SUB1P53999 MYL4-210ENST00000576874 641 ntTSL 37.81□□□□□ -1.164e-7■□□□□ 9
SUB1P53999 MYL4-201ENST00000354968 907 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.224e-7■□□□□ 9
SUB1P53999 MYL4-206ENST00000571981 920 ntTSL 37.46□□□□□ -1.224e-7■□□□□ 9
SUB1P53999 MYL4-204ENST00000570671 740 ntTSL 27.32□□□□□ -1.244e-7■□□□□ 9
SUB1P53999 RPS6-202ENST00000380381 892 ntTSL 2 BASIC7.14□□□□□ -1.271e-19■□□□□ 9
SUB1P53999 MYL4-209ENST00000573747 640 ntTSL 56.57□□□□□ -1.364e-7■□□□□ 9
SUB1P53999 MYL4-203ENST00000536623 650 ntTSL 56.37□□□□□ -1.394e-7■□□□□ 9
SUB1P53999 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.434e-7■□□□□ 9
SUB1P53999 HBP1-209ENST00000478930 563 ntTSL 44.81□□□□□ -1.644e-7■□□□□ 9
SUB1P53999 JPT2-205ENST00000562569 458 ntTSL 34.65□□□□□ -1.674e-7■□□□□ 9
SUB1P53999 INTS8-211ENST00000521860 548 ntTSL 53.6□□□□□ -1.834e-7■□□□□ 9
SUB1P53999 INTS8-212ENST00000522171 735 ntTSL 53.56□□□□□ -1.844e-7■□□□□ 9
SUB1P53999 HBP1-205ENST00000464009 478 ntTSL 53.12□□□□□ -1.914e-7■□□□□ 9
SUB1P53999 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.431e-12■□□□□ 9
SUB1P53999 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.151e-12■□□□□ 9
SUB1P53999 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.091e-12■□□□□ 9
SUB1P53999 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.451e-7■□□□□ 9
SUB1P53999 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC10.84□□□□□ -0.671e-7■□□□□ 9
SUB1P53999 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.921e-7■□□□□ 9
SUB1P53999 RPS15A-206ENST00000569083 1022 ntTSL 2 BASIC8.67□□□□□ -1.021e-7■□□□□ 9
SUB1P53999 RPS15A-208ENST00000572008 797 ntTSL 54.68□□□□□ -1.661e-7■□□□□ 9
SUB1P53999 RPS15A-212ENST00000576008 589 ntTSL 1 (best)4.59□□□□□ -1.671e-7■□□□□ 9
SUB1P53999 RPS15A-202ENST00000562935 427 ntTSL 24.54□□□□□ -1.681e-7■□□□□ 9
Retrieved 100 of 11,644 protein–RNA pairs in 268.6 ms