RNA–Protein interactions for RNA: ENST00000599551.5

UBA52-213, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene UBA52, Length 707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-213ENST00000599551 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
UBA52-213ENST00000599551 ABCC9O60706 1549 aa27.56■■■□□ 2
UBA52-213ENST00000599551 CCDC180Q9P1Z9 1646 aa27.34■■□□□ 1.97
UBA52-213ENST00000599551 RB1CC1Q8TDY2 1594 aa26.16■■□□□ 1.78
UBA52-213ENST00000599551 DNAJC5BQ9UF47 199 aa26.11■■□□□ 1.77
UBA52-213ENST00000599551 NACADO15069 1562 aa25.87■■□□□ 1.73
UBA52-213ENST00000599551 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
UBA52-213ENST00000599551 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
UBA52-213ENST00000599551 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
UBA52-213ENST00000599551 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
UBA52-213ENST00000599551 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
UBA52-213ENST00000599551 SHROOM4Q9ULL8 1493 aa25.07■■□□□ 1.6
UBA52-213ENST00000599551 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
UBA52-213ENST00000599551 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
UBA52-213ENST00000599551 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.57
UBA52-213ENST00000599551 ZCCHC6Q5VYS8 1495 aaKnown RBP24.88■■□□□ 1.57
UBA52-213ENST00000599551 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
UBA52-213ENST00000599551 SCRIBQ14160 1630 aa24.77■■□□□ 1.56
UBA52-213ENST00000599551 DNAJC5Q9H3Z4 198 aa24.35■■□□□ 1.49
UBA52-213ENST00000599551 CUX2O14529 1486 aa24■■□□□ 1.43
UBA52-213ENST00000599551 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
UBA52-213ENST00000599551 NCAPD3P42695 1498 aa23.82■■□□□ 1.4
UBA52-213ENST00000599551 HMGXB3Q12766 1538 aa23.68■■□□□ 1.38
UBA52-213ENST00000599551 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
UBA52-213ENST00000599551 SMARCA2P51531 1590 aa23.67■■□□□ 1.38
UBA52-213ENST00000599551 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
UBA52-213ENST00000599551 NESP48681 1621 aa23.55■■□□□ 1.36
UBA52-213ENST00000599551 THOC2Q8NI27 1593 aaKnown RBP23.49■■□□□ 1.35
UBA52-213ENST00000599551 BAZ1BQ9UIG0 1483 aaKnown RBP23.46■■□□□ 1.35
UBA52-213ENST00000599551 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
UBA52-213ENST00000599551 LAMC3Q9Y6N6 1575 aa23.43■■□□□ 1.34
UBA52-213ENST00000599551 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
UBA52-213ENST00000599551 KIF21AQ7Z4S6 1674 aa23.35■■□□□ 1.33
UBA52-213ENST00000599551 PDS5BQ9NTI5 1447 aa23.25■■□□□ 1.31
UBA52-213ENST00000599551 MROH2BQ7Z745 1585 aa23.16■■□□□ 1.3
UBA52-213ENST00000599551 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
UBA52-213ENST00000599551 MRC2Q9UBG0 1479 aa23.08■■□□□ 1.29
UBA52-213ENST00000599551 WDR62O43379 1518 aa23.07■■□□□ 1.28
UBA52-213ENST00000599551 CADPSQ9ULU8 1353 aa23.05■■□□□ 1.28
UBA52-213ENST00000599551 CEP164Q9UPV0 1460 aa22.92■■□□□ 1.26
UBA52-213ENST00000599551 WIZO95785 1651 aa22.91■■□□□ 1.26
UBA52-213ENST00000599551 FANCD2Q9BXW9 1451 aa22.82■■□□□ 1.24
UBA52-213ENST00000599551 OSCARQ8IYS5 282 aa22.75■■□□□ 1.23
UBA52-213ENST00000599551 CFTRP13569 1480 aa22.73■■□□□ 1.23
UBA52-213ENST00000599551 PRDM2Q13029 1718 aa22.67■■□□□ 1.22
UBA52-213ENST00000599551 URB2Q14146 1524 aaKnown RBP22.65■■□□□ 1.22
UBA52-213ENST00000599551 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
UBA52-213ENST00000599551 RIMBP3CA6NJZ7 1639 aa22.58■■□□□ 1.21
UBA52-213ENST00000599551 RIMBP3BA6NNM3 1639 aa22.58■■□□□ 1.21
UBA52-213ENST00000599551 RIMBP3Q9UFD9 1639 aa22.58■■□□□ 1.21
UBA52-213ENST00000599551 RSF1Q96T23 1441 aaPredicted RBP22.51■■□□□ 1.19
UBA52-213ENST00000599551 IFT140Q96RY7 1462 aa22.47■■□□□ 1.19
UBA52-213ENST00000599551 ARHGEF11O15085 1522 aa22.44■■□□□ 1.18
UBA52-213ENST00000599551 ZNF608Q9ULD9 1512 aaPredicted RBP22.41■■□□□ 1.18
UBA52-213ENST00000599551 EIF4G3O43432 1585 aaKnown RBP22.36■■□□□ 1.17
UBA52-213ENST00000599551 TOPBP1Q92547 1522 aa22.36■■□□□ 1.17
UBA52-213ENST00000599551 ABCC8Q09428 1581 aa22.33■■□□□ 1.16
UBA52-213ENST00000599551 CHD1O14646 1710 aa22.31■■□□□ 1.16
UBA52-213ENST00000599551 CCDC88BA6NC98 1476 aa22.28■■□□□ 1.16
UBA52-213ENST00000599551 DNMBPQ6XZF7 1577 aa22.27■■□□□ 1.16
UBA52-213ENST00000599551 TARBP1Q13395 1621 aaKnown RBP22.22■■□□□ 1.15
UBA52-213ENST00000599551 CYB5RLQ6IPT4 315 aa22.21■■□□□ 1.15
UBA52-213ENST00000599551 ARAP1Q96P48 1450 aa22.17■■□□□ 1.14
UBA52-213ENST00000599551 AQRO60306 1485 aaKnown RBP eCLIP22.14■■□□□ 1.132e-8■■■■■ 38.7
UBA52-213ENST00000599551 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
UBA52-213ENST00000599551 POLA1P09884 1462 aaPredicted RBP22.09■■□□□ 1.13
UBA52-213ENST00000599551 FBLN2P98095 1184 aa22.06■■□□□ 1.12
UBA52-213ENST00000599551 WDR97A6NE52 1622 aa22.05■■□□□ 1.12
UBA52-213ENST00000599551 CLASP1Q7Z460 1538 aa21.99■■□□□ 1.11
UBA52-213ENST00000599551 SYNJ1O43426 1573 aa21.97■■□□□ 1.11
UBA52-213ENST00000599551 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
UBA52-213ENST00000599551 SNAPC4Q5SXM2 1469 aa21.96■■□□□ 1.11
UBA52-213ENST00000599551 SOGA1O94964 1423 aa21.95■■□□□ 1.1
UBA52-213ENST00000599551 MAGI1Q96QZ7 1491 aaPredicted RBP21.92■■□□□ 1.1
UBA52-213ENST00000599551 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
UBA52-213ENST00000599551 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
UBA52-213ENST00000599551 CHMP7Q8WUX9 453 aaPredicted RBP21.86■■□□□ 1.09
UBA52-213ENST00000599551 GRIN2BQ13224 1484 aa21.85■■□□□ 1.09
UBA52-213ENST00000599551 PBRM1Q86U86 1689 aa21.84■■□□□ 1.09
UBA52-213ENST00000599551 SYNJ2O15056 1496 aa21.83■■□□□ 1.09
UBA52-213ENST00000599551 AEBP2Q6ZN18 517 aaPredicted RBP21.8■■□□□ 1.08
UBA52-213ENST00000599551 CUX1P39880 1505 aa21.8■■□□□ 1.08
UBA52-213ENST00000599551 GAPVD1Q14C86 1478 aa21.74■■□□□ 1.07
UBA52-213ENST00000599551 ABCA5Q8WWZ7 1642 aa21.69■■□□□ 1.06
UBA52-213ENST00000599551 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
UBA52-213ENST00000599551 GRIN2AQ12879 1464 aa21.57■■□□□ 1.04
UBA52-213ENST00000599551 ERCC6L2Q5T890 1561 aa21.56■■□□□ 1.04
UBA52-213ENST00000599551 ADAMTS12P58397 1594 aa21.55■■□□□ 1.04
UBA52-213ENST00000599551 CEP170Q5SW79 1584 aa21.54■■□□□ 1.04
UBA52-213ENST00000599551 SHROOM2Q13796 1616 aa21.52■■□□□ 1.04
UBA52-213ENST00000599551 KIF13AQ9H1H9 1805 aa21.5■■□□□ 1.03
UBA52-213ENST00000599551 NUP160Q12769 1436 aa21.5■■□□□ 1.03
UBA52-213ENST00000599551 WRNQ14191 1432 aaPredicted RBP eCLIP21.46■■□□□ 1.03
UBA52-213ENST00000599551 BIVM-ERCC5R4GMW8 1640 aa21.43■■□□□ 1.02
UBA52-213ENST00000599551 FHAD1B1AJZ9 1412 aa21.42■■□□□ 1.02
UBA52-213ENST00000599551 TOP2BQ02880 1626 aa21.4■■□□□ 1.02
UBA52-213ENST00000599551 ERICH3Q5RHP9 1530 aa21.39■■□□□ 1.01
UBA52-213ENST00000599551 PRG4Q92954 1404 aaPredicted RBP21.3■■□□□ 1
UBA52-213ENST00000599551 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
UBA52-213ENST00000599551 MAPKBP1O60336 1514 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms