RNA–Protein interactions for RNA: ENST00000573554.1

RPS15A-209, Transcript of ribosomal protein S15a, human

TSL 1 (best)

Gene RPS15A, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS15A-209	ENST00000573554	NISCH	Q9Y2I1	1504 aa		41.57	■■■■■ 4.25
RPS15A-209	ENST00000573554	CCDC180	Q9P1Z9	1646 aa		37.1	■■■■□ 3.53
RPS15A-209	ENST00000573554	ABCC9	O60706	1549 aa		36.85	■■■■□ 3.49
RPS15A-209	ENST00000573554	RB1CC1	Q8TDY2	1594 aa		35.17	■■■■□ 3.22
RPS15A-209	ENST00000573554	NACAD	O15069	1562 aa		35.02	■■■■□ 3.2
RPS15A-209	ENST00000573554	DCAF8L2	P0C7V8	631 aa		34.97	■■■■□ 3.19
RPS15A-209	ENST00000573554	MYO15B	Q96JP2	1530 aa		34.65	■■■■□ 3.14
RPS15A-209	ENST00000573554	ZCCHC6	Q5VYS8	1495 aa	Known RBP	34.51	■■■■□ 3.11
RPS15A-209	ENST00000573554	UNC13A	Q9UPW8	1703 aa		34.43	■■■■□ 3.1
RPS15A-209	ENST00000573554	PABPN1	Q86U42	306 aa	Known RBP eCLIP	34.39	■■■■□ 3.1
RPS15A-209	ENST00000573554	DNAJC5B	Q9UF47	199 aa		34.36	■■■■□ 3.09
RPS15A-209	ENST00000573554	DCAF1	Q9Y4B6	1507 aa		34.33	■■■■□ 3.09
RPS15A-209	ENST00000573554	BICRA	Q9NZM4	1560 aa		34.2	■■■■□ 3.07
RPS15A-209	ENST00000573554	SCRIB	Q14160	1630 aa		33.86	■■■■□ 3.01
RPS15A-209	ENST00000573554	SHROOM4	Q9ULL8	1493 aa		33.67	■■■□□ 2.98
RPS15A-209	ENST00000573554	EIF4G1	Q04637	1599 aa	Known RBP	33.3	■■■□□ 2.92
RPS15A-209	ENST00000573554	CC2D2A	Q9P2K1	1620 aa		33.29	■■■□□ 2.92
RPS15A-209	ENST00000573554	CECR2	Q9BXF3	1484 aa		33.14	■■■□□ 2.9
RPS15A-209	ENST00000573554	NCAPD3	P42695	1498 aa		32.36	■■■□□ 2.77
RPS15A-209	ENST00000573554	SMARCA4	P51532	1647 aa		32.34	■■■□□ 2.77
RPS15A-209	ENST00000573554	ATAD2B	Q9ULI0	1458 aa		32.31	■■■□□ 2.76
RPS15A-209	ENST00000573554	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	32.21	■■■□□ 2.75
RPS15A-209	ENST00000573554	SMARCA2	P51531	1590 aa		32.19	■■■□□ 2.74
RPS15A-209	ENST00000573554	HMGXB3	Q12766	1538 aa		32.1	■■■□□ 2.73
RPS15A-209	ENST00000573554	MROH2B	Q7Z745	1585 aa		32.06	■■■□□ 2.72
RPS15A-209	ENST00000573554	PEG3	Q9GZU2	1588 aa		32.02	■■■□□ 2.72
RPS15A-209	ENST00000573554	BAZ1B	Q9UIG0	1483 aa	Known RBP	31.97	■■■□□ 2.71
RPS15A-209	ENST00000573554	NES	P48681	1621 aa		31.77	■■■□□ 2.68
RPS15A-209	ENST00000573554	ERCC6	Q03468	1493 aa		31.73	■■■□□ 2.67
RPS15A-209	ENST00000573554	WIZ	O95785	1651 aa		31.69	■■■□□ 2.66
RPS15A-209	ENST00000573554	CUX2	O14529	1486 aa		31.57	■■■□□ 2.64
RPS15A-209	ENST00000573554	LAMC3	Q9Y6N6	1575 aa		31.54	■■■□□ 2.64
RPS15A-209	ENST00000573554	RSF1	Q96T23	1441 aa	Predicted RBP	31.51	■■■□□ 2.64
RPS15A-209	ENST00000573554	CADPS	Q9ULU8	1353 aa		31.39	■■■□□ 2.62
RPS15A-209	ENST00000573554	PDS5B	Q9NTI5	1447 aa		31.35	■■■□□ 2.61
RPS15A-209	ENST00000573554	THOC2	Q8NI27	1593 aa	Known RBP	31.34	■■■□□ 2.61
RPS15A-209	ENST00000573554	KIF21A	Q7Z4S6	1674 aa		31.33	■■■□□ 2.61
RPS15A-209	ENST00000573554	TOP2A	P11388	1531 aa	Known RBP	31.27	■■■□□ 2.6
RPS15A-209	ENST00000573554	DNAJC5	Q9H3Z4	198 aa		31.25	■■■□□ 2.59
RPS15A-209	ENST00000573554	CFTR	P13569	1480 aa		31.1	■■■□□ 2.57
RPS15A-209	ENST00000573554	MRC2	Q9UBG0	1479 aa		31.06	■■■□□ 2.56
RPS15A-209	ENST00000573554	FANCD2	Q9BXW9	1451 aa		31.01	■■■□□ 2.56
RPS15A-209	ENST00000573554	CEP164	Q9UPV0	1460 aa		31	■■■□□ 2.55
RPS15A-209	ENST00000573554	WDR62	O43379	1518 aa		30.98	■■■□□ 2.55
RPS15A-209	ENST00000573554	CCDC88B	A6NC98	1476 aa		30.95	■■■□□ 2.55
RPS15A-209	ENST00000573554	PRDM2	Q13029	1718 aa		30.78	■■■□□ 2.52
RPS15A-209	ENST00000573554	URB2	Q14146	1524 aa	Known RBP	30.77	■■■□□ 2.52
RPS15A-209	ENST00000573554	TOPBP1	Q92547	1522 aa		30.48	■■■□□ 2.47
RPS15A-209	ENST00000573554	ABCC8	Q09428	1581 aa		30.4	■■■□□ 2.46
RPS15A-209	ENST00000573554	SUPT5H	O00267	1087 aa	Known RBP	30.38	■■■□□ 2.45
RPS15A-209	ENST00000573554	IFT140	Q96RY7	1462 aa		30.38	■■■□□ 2.45
RPS15A-209	ENST00000573554	DNMBP	Q6XZF7	1577 aa		30.37	■■■□□ 2.45
RPS15A-209	ENST00000573554	ZNF608	Q9ULD9	1512 aa	Predicted RBP	30.34	■■■□□ 2.45
RPS15A-209	ENST00000573554	OSCAR	Q8IYS5	282 aa		30.24	■■■□□ 2.43
RPS15A-209	ENST00000573554	TARBP1	Q13395	1621 aa	Known RBP	30.19	■■■□□ 2.42
RPS15A-209	ENST00000573554	POLA1	P09884	1462 aa	Predicted RBP	30.19	■■■□□ 2.42
RPS15A-209	ENST00000573554	EIF4G3	O43432	1585 aa	Known RBP	30.15	■■■□□ 2.42
RPS15A-209	ENST00000573554	AQR	O60306	1485 aa	Known RBP eCLIP	30.12	■■■□□ 2.41	1e-9	■■■■■ 38.9
RPS15A-209	ENST00000573554	RAD54L2	Q9Y4B4	1467 aa		30.1	■■■□□ 2.41
RPS15A-209	ENST00000573554	CUX1	P39880	1505 aa		30.08	■■■□□ 2.41
RPS15A-209	ENST00000573554	SOGA1	O94964	1423 aa		30.07	■■■□□ 2.4
RPS15A-209	ENST00000573554	FGD5	Q6ZNL6	1462 aa		30.05	■■■□□ 2.4
RPS15A-209	ENST00000573554	TRIM41	Q8WV44	630 aa		29.99	■■■□□ 2.39
RPS15A-209	ENST00000573554	TDRD9	Q8NDG6	1382 aa	Known RBP	29.98	■■■□□ 2.39
RPS15A-209	ENST00000573554	CHD1	O14646	1710 aa		29.87	■■■□□ 2.37
RPS15A-209	ENST00000573554	WDR97	A6NE52	1622 aa		29.84	■■■□□ 2.37
RPS15A-209	ENST00000573554	FBLN2	P98095	1184 aa		29.83	■■■□□ 2.37
RPS15A-209	ENST00000573554	RIMBP3C	A6NJZ7	1639 aa		29.79	■■■□□ 2.36
RPS15A-209	ENST00000573554	RIMBP3B	A6NNM3	1639 aa		29.79	■■■□□ 2.36
RPS15A-209	ENST00000573554	RIMBP3	Q9UFD9	1639 aa		29.79	■■■□□ 2.36
RPS15A-209	ENST00000573554	SNAPC4	Q5SXM2	1469 aa		29.78	■■■□□ 2.36
RPS15A-209	ENST00000573554	GRIN2B	Q13224	1484 aa		29.74	■■■□□ 2.35
RPS15A-209	ENST00000573554	ARHGEF11	O15085	1522 aa		29.72	■■■□□ 2.35
RPS15A-209	ENST00000573554	ABCA10	Q8WWZ4	1543 aa		29.72	■■■□□ 2.35
RPS15A-209	ENST00000573554	MAGI1	Q96QZ7	1491 aa	Predicted RBP	29.7	■■■□□ 2.35
RPS15A-209	ENST00000573554	GAPVD1	Q14C86	1478 aa		29.69	■■■□□ 2.34
RPS15A-209	ENST00000573554	WRN	Q14191	1432 aa	Predicted RBP eCLIP	29.69	■■■□□ 2.34	4e-9	■■□□□ 14.2
RPS15A-209	ENST00000573554	TOP2B	Q02880	1626 aa		29.67	■■■□□ 2.34
RPS15A-209	ENST00000573554	BIVM-ERCC5	R4GMW8	1640 aa		29.67	■■■□□ 2.34
RPS15A-209	ENST00000573554	SYNJ1	O43426	1573 aa		29.66	■■■□□ 2.34
RPS15A-209	ENST00000573554	CHMP7	Q8WUX9	453 aa	Predicted RBP	29.66	■■■□□ 2.34
RPS15A-209	ENST00000573554	ABCA5	Q8WWZ7	1642 aa		29.64	■■■□□ 2.34
RPS15A-209	ENST00000573554	PBRM1	Q86U86	1689 aa		29.64	■■■□□ 2.34
RPS15A-209	ENST00000573554	SYNJ2	O15056	1496 aa		29.61	■■■□□ 2.33
RPS15A-209	ENST00000573554	CLASP1	Q7Z460	1538 aa		29.54	■■■□□ 2.32
RPS15A-209	ENST00000573554	CYB5RL	Q6IPT4	315 aa		29.53	■■■□□ 2.32
RPS15A-209	ENST00000573554	ARAP1	Q96P48	1450 aa		29.47	■■■□□ 2.31
RPS15A-209	ENST00000573554	ADAMTS12	P58397	1594 aa		29.38	■■■□□ 2.29
RPS15A-209	ENST00000573554	GRIN2A	Q12879	1464 aa		29.36	■■■□□ 2.29
RPS15A-209	ENST00000573554	ERICH3	Q5RHP9	1530 aa		29.34	■■■□□ 2.29
RPS15A-209	ENST00000573554	FHAD1	B1AJZ9	1412 aa		29.32	■■■□□ 2.28
RPS15A-209	ENST00000573554	NUP160	Q12769	1436 aa		29.27	■■■□□ 2.28
RPS15A-209	ENST00000573554	CEP170	Q5SW79	1584 aa		29.26	■■■□□ 2.28
RPS15A-209	ENST00000573554	ERCC6L2	Q5T890	1561 aa		29.15	■■■□□ 2.26
RPS15A-209	ENST00000573554	IGF1R	P08069	1367 aa		29.1	■■■□□ 2.25
RPS15A-209	ENST00000573554	SHROOM2	Q13796	1616 aa		29.09	■■■□□ 2.25
RPS15A-209	ENST00000573554	KIF27	Q86VH2	1401 aa		29.09	■■■□□ 2.25
RPS15A-209	ENST00000573554	TRH	P20396	242 aa	Predicted RBP	29.05	■■■□□ 2.24
RPS15A-209	ENST00000573554	JPH4	Q96JJ6	628 aa		29	■■■□□ 2.23
RPS15A-209	ENST00000573554	RUSC2	Q8N2Y8	1516 aa		28.96	■■■□□ 2.23

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms