RNA–Protein interactions for RNA: ENST00000593166.1

SLC25A39-217, Transcript of solute carrier family 25 member 39, humanhuman

TSL 3

Gene SLC25A39, Length 797 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-217ENST00000593166 NISCHQ9Y2I1 1504 aa37.4■■■■□ 3.58
SLC25A39-217ENST00000593166 CCDC180Q9P1Z9 1646 aa33.1■■■□□ 2.89
SLC25A39-217ENST00000593166 ABCC9O60706 1549 aa32.02■■■□□ 2.72
SLC25A39-217ENST00000593166 ZCCHC6Q5VYS8 1495 aaKnown RBP31.25■■■□□ 2.59
SLC25A39-217ENST00000593166 NACADO15069 1562 aa31.05■■■□□ 2.56
SLC25A39-217ENST00000593166 MYO15BQ96JP2 1530 aa31.02■■■□□ 2.56
SLC25A39-217ENST00000593166 DCAF1Q9Y4B6 1507 aa31.01■■■□□ 2.55
SLC25A39-217ENST00000593166 DCAF8L2P0C7V8 631 aa31■■■□□ 2.55
SLC25A39-217ENST00000593166 RB1CC1Q8TDY2 1594 aa30.98■■■□□ 2.55
SLC25A39-217ENST00000593166 UNC13AQ9UPW8 1703 aa30.22■■■□□ 2.43
SLC25A39-217ENST00000593166 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
SLC25A39-217ENST00000593166 BICRAQ9NZM4 1560 aa30.03■■■□□ 2.4
SLC25A39-217ENST00000593166 PABPN1Q86U42 306 aaKnown RBP eCLIP29.96■■■□□ 2.394e-7■■■□□ 16.9
SLC25A39-217ENST00000593166 SHROOM4Q9ULL8 1493 aa29.82■■■□□ 2.36
SLC25A39-217ENST00000593166 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
SLC25A39-217ENST00000593166 CECR2Q9BXF3 1484 aa29.08■■■□□ 2.25
SLC25A39-217ENST00000593166 DNAJC5BQ9UF47 199 aa29.07■■■□□ 2.24
SLC25A39-217ENST00000593166 CC2D2AQ9P2K1 1620 aa28.98■■■□□ 2.23
SLC25A39-217ENST00000593166 BAZ1AQ9NRL2 1556 aaPredicted RBP28.96■■■□□ 2.23
SLC25A39-217ENST00000593166 SMARCA4P51532 1647 aa28.94■■■□□ 2.22
SLC25A39-217ENST00000593166 MROH2BQ7Z745 1585 aa28.81■■■□□ 2.2
SLC25A39-217ENST00000593166 ATAD2BQ9ULI0 1458 aa28.71■■■□□ 2.19
SLC25A39-217ENST00000593166 SMARCA2P51531 1590 aa28.69■■■□□ 2.18
SLC25A39-217ENST00000593166 PEG3Q9GZU2 1588 aa28.68■■■□□ 2.18
SLC25A39-217ENST00000593166 NCAPD3P42695 1498 aa28.66■■■□□ 2.18
SLC25A39-217ENST00000593166 RSF1Q96T23 1441 aaPredicted RBP28.62■■■□□ 2.17
SLC25A39-217ENST00000593166 HMGXB3Q12766 1538 aa28.54■■■□□ 2.16
SLC25A39-217ENST00000593166 WIZO95785 1651 aa28.48■■■□□ 2.15
SLC25A39-217ENST00000593166 BAZ1BQ9UIG0 1483 aaKnown RBP28.47■■■□□ 2.15
SLC25A39-217ENST00000593166 TOP2AP11388 1531 aaKnown RBP28.26■■■□□ 2.11
SLC25A39-217ENST00000593166 SUPT5HO00267 1087 aaKnown RBP28.08■■■□□ 2.09
SLC25A39-217ENST00000593166 CCDC88BA6NC98 1476 aa27.9■■■□□ 2.06
SLC25A39-217ENST00000593166 CADPSQ9ULU8 1353 aa27.83■■■□□ 2.05
SLC25A39-217ENST00000593166 LAMC3Q9Y6N6 1575 aa27.82■■■□□ 2.04
SLC25A39-217ENST00000593166 NESP48681 1621 aa27.81■■■□□ 2.04
SLC25A39-217ENST00000593166 CFTRP13569 1480 aa27.74■■■□□ 2.03
SLC25A39-217ENST00000593166 PDS5BQ9NTI5 1447 aa27.63■■■□□ 2.01
SLC25A39-217ENST00000593166 ERCC6Q03468 1493 aa27.57■■■□□ 2
SLC25A39-217ENST00000593166 PRDM2Q13029 1718 aa27.5■■□□□ 1.99
SLC25A39-217ENST00000593166 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
SLC25A39-217ENST00000593166 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
SLC25A39-217ENST00000593166 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
SLC25A39-217ENST00000593166 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
SLC25A39-217ENST00000593166 MRC2Q9UBG0 1479 aa27.33■■□□□ 1.97
SLC25A39-217ENST00000593166 WDR62O43379 1518 aa27.23■■□□□ 1.95
SLC25A39-217ENST00000593166 CUX2O14529 1486 aa27.2■■□□□ 1.95
SLC25A39-217ENST00000593166 URB2Q14146 1524 aaKnown RBP27.2■■□□□ 1.94
SLC25A39-217ENST00000593166 ABCC8Q09428 1581 aa27.14■■□□□ 1.93
SLC25A39-217ENST00000593166 TOPBP1Q92547 1522 aa27.1■■□□□ 1.93
SLC25A39-217ENST00000593166 DNMBPQ6XZF7 1577 aa27.09■■□□□ 1.93
SLC25A39-217ENST00000593166 CUX1P39880 1505 aa27.01■■□□□ 1.91
SLC25A39-217ENST00000593166 WRNQ14191 1432 aaPredicted RBP eCLIP26.98■■□□□ 1.91
SLC25A39-217ENST00000593166 POLA1P09884 1462 aaPredicted RBP26.89■■□□□ 1.9
SLC25A39-217ENST00000593166 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
SLC25A39-217ENST00000593166 SYNJ1O43426 1573 aa26.87■■□□□ 1.89
SLC25A39-217ENST00000593166 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
SLC25A39-217ENST00000593166 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
SLC25A39-217ENST00000593166 IFT140Q96RY7 1462 aa26.86■■□□□ 1.89
SLC25A39-217ENST00000593166 TARBP1Q13395 1621 aaKnown RBP26.77■■□□□ 1.88
SLC25A39-217ENST00000593166 SOGA1O94964 1423 aa26.77■■□□□ 1.88
SLC25A39-217ENST00000593166 RAD54L2Q9Y4B4 1467 aa26.74■■□□□ 1.87
SLC25A39-217ENST00000593166 ZNF608Q9ULD9 1512 aaPredicted RBP26.67■■□□□ 1.86
SLC25A39-217ENST00000593166 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
SLC25A39-217ENST00000593166 WDR97A6NE52 1622 aa26.62■■□□□ 1.85
SLC25A39-217ENST00000593166 EIF4G3O43432 1585 aaKnown RBP26.58■■□□□ 1.85
SLC25A39-217ENST00000593166 TDRD9Q8NDG6 1382 aaKnown RBP26.57■■□□□ 1.84
SLC25A39-217ENST00000593166 AQRO60306 1485 aaKnown RBP eCLIP26.55■■□□□ 1.843e-7■■■■■ 29.8
SLC25A39-217ENST00000593166 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
SLC25A39-217ENST00000593166 ABCA5Q8WWZ7 1642 aa26.5■■□□□ 1.83
SLC25A39-217ENST00000593166 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
SLC25A39-217ENST00000593166 CHIC1Q5VXU3 224 aa26.45■■□□□ 1.82
SLC25A39-217ENST00000593166 GRIN2BQ13224 1484 aa26.44■■□□□ 1.82
SLC25A39-217ENST00000593166 KIF27Q86VH2 1401 aa26.39■■□□□ 1.82
SLC25A39-217ENST00000593166 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
SLC25A39-217ENST00000593166 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
SLC25A39-217ENST00000593166 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
SLC25A39-217ENST00000593166 ERICH3Q5RHP9 1530 aa26.33■■□□□ 1.81
SLC25A39-217ENST00000593166 IGF1RP08069 1367 aa26.23■■□□□ 1.79
SLC25A39-217ENST00000593166 SYNJ2O15056 1496 aa26.23■■□□□ 1.79
SLC25A39-217ENST00000593166 ADAMTS12P58397 1594 aa26.22■■□□□ 1.79
SLC25A39-217ENST00000593166 RUSC2Q8N2Y8 1516 aa26.22■■□□□ 1.79
SLC25A39-217ENST00000593166 DNAJC5Q9H3Z4 198 aa26.2■■□□□ 1.78
SLC25A39-217ENST00000593166 FHAD1B1AJZ9 1412 aa26.2■■□□□ 1.78
SLC25A39-217ENST00000593166 CHD1O14646 1710 aa26.15■■□□□ 1.78
SLC25A39-217ENST00000593166 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
SLC25A39-217ENST00000593166 EEA1Q15075 1411 aa26.14■■□□□ 1.78
SLC25A39-217ENST00000593166 CUL7Q14999 1698 aa26.14■■□□□ 1.78
SLC25A39-217ENST00000593166 FBLN2P98095 1184 aa26.13■■□□□ 1.77
SLC25A39-217ENST00000593166 GRIN2AQ12879 1464 aa26.11■■□□□ 1.77
SLC25A39-217ENST00000593166 OSCARQ8IYS5 282 aa26.1■■□□□ 1.77
SLC25A39-217ENST00000593166 CARMIL1Q5VZK9 1371 aa26.08■■□□□ 1.77
SLC25A39-217ENST00000593166 CSRNP3Q8WYN3 585 aa26.01■■□□□ 1.75
SLC25A39-217ENST00000593166 NUP160Q12769 1436 aa25.99■■□□□ 1.75
SLC25A39-217ENST00000593166 PRXQ9BXM0 1461 aa25.98■■□□□ 1.75
SLC25A39-217ENST00000593166 RAPGEF2Q9Y4G8 1499 aa25.97■■□□□ 1.75
SLC25A39-217ENST00000593166 FAM9AQ8IZU1 332 aaPredicted RBP25.94■■□□□ 1.74
SLC25A39-217ENST00000593166 CEP170Q5SW79 1584 aa25.94■■□□□ 1.74
SLC25A39-217ENST00000593166 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
SLC25A39-217ENST00000593166 KIAA0586Q9BVV6 1533 aa25.82■■□□□ 1.72
SLC25A39-217ENST00000593166 KIF21BO75037 1637 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms