RNA–Protein interactions for RNA: ENST00000585695.5

SLC25A39-206, Transcript of solute carrier family 25 member 39, humanhuman

TSL 2

Gene SLC25A39, Length 1,121 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-206ENST00000585695 NISCHQ9Y2I1 1504 aa55.92■■■■■ 6.54
SLC25A39-206ENST00000585695 CCDC180Q9P1Z9 1646 aa49.76■■■■■ 5.56
SLC25A39-206ENST00000585695 ABCC9O60706 1549 aa49.3■■■■■ 5.48
SLC25A39-206ENST00000585695 DCAF8L2P0C7V8 631 aa47.15■■■■■ 5.14
SLC25A39-206ENST00000585695 RB1CC1Q8TDY2 1594 aa47.1■■■■■ 5.13
SLC25A39-206ENST00000585695 NACADO15069 1562 aa46.93■■■■■ 5.1
SLC25A39-206ENST00000585695 ZCCHC6Q5VYS8 1495 aaKnown RBP46.48■■■■■ 5.03
SLC25A39-206ENST00000585695 MYO15BQ96JP2 1530 aa46.44■■■■■ 5.02
SLC25A39-206ENST00000585695 DCAF1Q9Y4B6 1507 aa46.13■■■■■ 4.98
SLC25A39-206ENST00000585695 PABPN1Q86U42 306 aaKnown RBP eCLIP46.1■■■■■ 4.971e-6■■□□□ 13.6
SLC25A39-206ENST00000585695 UNC13AQ9UPW8 1703 aa46.03■■■■■ 4.96
SLC25A39-206ENST00000585695 BICRAQ9NZM4 1560 aa45.72■■■■■ 4.91
SLC25A39-206ENST00000585695 DNAJC5BQ9UF47 199 aa45.65■■■■■ 4.9
SLC25A39-206ENST00000585695 SCRIBQ14160 1630 aa45.57■■■■■ 4.89
SLC25A39-206ENST00000585695 SHROOM4Q9ULL8 1493 aa45.05■■■■■ 4.8
SLC25A39-206ENST00000585695 EIF4G1Q04637 1599 aaKnown RBP44.55■■■■■ 4.72
SLC25A39-206ENST00000585695 CC2D2AQ9P2K1 1620 aa44.49■■■■■ 4.71
SLC25A39-206ENST00000585695 CECR2Q9BXF3 1484 aa44.28■■■■■ 4.68
SLC25A39-206ENST00000585695 SMARCA4P51532 1647 aa43.47■■■■■ 4.55
SLC25A39-206ENST00000585695 ATAD2BQ9ULI0 1458 aa43.35■■■■■ 4.53
SLC25A39-206ENST00000585695 BAZ1AQ9NRL2 1556 aaPredicted RBP43.34■■■■■ 4.53
SLC25A39-206ENST00000585695 NCAPD3P42695 1498 aa43.34■■■■■ 4.53
SLC25A39-206ENST00000585695 SMARCA2P51531 1590 aa43.23■■■■■ 4.51
SLC25A39-206ENST00000585695 MROH2BQ7Z745 1585 aa43.16■■■■■ 4.5
SLC25A39-206ENST00000585695 HMGXB3Q12766 1538 aa43.05■■■■■ 4.48
SLC25A39-206ENST00000585695 BAZ1BQ9UIG0 1483 aaKnown RBP42.99■■■■■ 4.47
SLC25A39-206ENST00000585695 PEG3Q9GZU2 1588 aa42.95■■■■■ 4.47
SLC25A39-206ENST00000585695 WIZO95785 1651 aa42.66■■■■■ 4.42
SLC25A39-206ENST00000585695 NESP48681 1621 aa42.55■■■■■ 4.4
SLC25A39-206ENST00000585695 RSF1Q96T23 1441 aaPredicted RBP42.52■■■■■ 4.4
SLC25A39-206ENST00000585695 ERCC6Q03468 1493 aa42.49■■■■■ 4.39
SLC25A39-206ENST00000585695 LAMC3Q9Y6N6 1575 aa42.22■■■■■ 4.35
SLC25A39-206ENST00000585695 TOP2AP11388 1531 aaKnown RBP42.13■■■■■ 4.33
SLC25A39-206ENST00000585695 CADPSQ9ULU8 1353 aa42.12■■■■■ 4.33
SLC25A39-206ENST00000585695 CUX2O14529 1486 aa42.06■■■■■ 4.32
SLC25A39-206ENST00000585695 PDS5BQ9NTI5 1447 aa42.02■■■■■ 4.32
SLC25A39-206ENST00000585695 KIF21AQ7Z4S6 1674 aa41.94■■■■■ 4.3
SLC25A39-206ENST00000585695 THOC2Q8NI27 1593 aaKnown RBP41.86■■■■■ 4.29
SLC25A39-206ENST00000585695 CFTRP13569 1480 aa41.74■■■■■ 4.27
SLC25A39-206ENST00000585695 CCDC88BA6NC98 1476 aa41.71■■■■■ 4.27
SLC25A39-206ENST00000585695 FANCD2Q9BXW9 1451 aa41.65■■■■■ 4.26
SLC25A39-206ENST00000585695 MRC2Q9UBG0 1479 aa41.62■■■■■ 4.25
SLC25A39-206ENST00000585695 CEP164Q9UPV0 1460 aa41.61■■■■■ 4.25
SLC25A39-206ENST00000585695 WDR62O43379 1518 aa41.45■■■■■ 4.23
SLC25A39-206ENST00000585695 SUPT5HO00267 1087 aaKnown RBP41.35■■■■■ 4.21
SLC25A39-206ENST00000585695 DNAJC5Q9H3Z4 198 aa41.32■■■■■ 4.21
SLC25A39-206ENST00000585695 PRDM2Q13029 1718 aa41.3■■■■■ 4.2
SLC25A39-206ENST00000585695 URB2Q14146 1524 aaKnown RBP41.26■■■■■ 4.2
SLC25A39-206ENST00000585695 TOPBP1Q92547 1522 aa40.93■■■■■ 4.14
SLC25A39-206ENST00000585695 ABCC8Q09428 1581 aa40.81■■■■■ 4.12
SLC25A39-206ENST00000585695 DNMBPQ6XZF7 1577 aa40.8■■■■■ 4.12
SLC25A39-206ENST00000585695 IFT140Q96RY7 1462 aa40.74■■■■■ 4.11
SLC25A39-206ENST00000585695 ZNF608Q9ULD9 1512 aaPredicted RBP40.67■■■■■ 4.1
SLC25A39-206ENST00000585695 POLA1P09884 1462 aaPredicted RBP40.56■■■■■ 4.08
SLC25A39-206ENST00000585695 CUX1P39880 1505 aa40.49■■■■■ 4.07
SLC25A39-206ENST00000585695 RAD54L2Q9Y4B4 1467 aa40.46■■■■■ 4.07
SLC25A39-206ENST00000585695 TARBP1Q13395 1621 aaKnown RBP40.46■■■■■ 4.07
SLC25A39-206ENST00000585695 SOGA1O94964 1423 aa40.42■■■■■ 4.06
SLC25A39-206ENST00000585695 FGD5Q6ZNL6 1462 aa40.42■■■■■ 4.06
SLC25A39-206ENST00000585695 EIF4G3O43432 1585 aaKnown RBP40.41■■■■■ 4.06
SLC25A39-206ENST00000585695 AQRO60306 1485 aaKnown RBP eCLIP40.41■■■■■ 4.062e-7■■■■■ 35.5
SLC25A39-206ENST00000585695 OSCARQ8IYS5 282 aa40.37■■■■■ 4.05
SLC25A39-206ENST00000585695 TDRD9Q8NDG6 1382 aaKnown RBP40.3■■■■■ 4.04
SLC25A39-206ENST00000585695 WRNQ14191 1432 aaPredicted RBP eCLIP40.1■■■■■ 4.01
SLC25A39-206ENST00000585695 FBLN2P98095 1184 aa40.1■■■■■ 4.01
SLC25A39-206ENST00000585695 SYNJ1O43426 1573 aa40.01■■■■■ 4
SLC25A39-206ENST00000585695 WDR97A6NE52 1622 aa40■■■■□ 3.99
SLC25A39-206ENST00000585695 SNAPC4Q5SXM2 1469 aa40■■■■□ 3.99
SLC25A39-206ENST00000585695 TOP2BQ02880 1626 aa39.98■■■■□ 3.99
SLC25A39-206ENST00000585695 CHD1O14646 1710 aa39.98■■■■□ 3.99
SLC25A39-206ENST00000585695 TRIM41Q8WV44 630 aa39.96■■■■□ 3.99
SLC25A39-206ENST00000585695 ABCA10Q8WWZ4 1543 aa39.96■■■■□ 3.99
SLC25A39-206ENST00000585695 BIVM-ERCC5R4GMW8 1640 aa39.95■■■■□ 3.99
SLC25A39-206ENST00000585695 GRIN2BQ13224 1484 aa39.94■■■■□ 3.98
SLC25A39-206ENST00000585695 GAPVD1Q14C86 1478 aa39.92■■■■□ 3.98
SLC25A39-206ENST00000585695 CHMP7Q8WUX9 453 aaPredicted RBP39.85■■■■□ 3.97
SLC25A39-206ENST00000585695 MAGI1Q96QZ7 1491 aaPredicted RBP39.83■■■■□ 3.97
SLC25A39-206ENST00000585695 ABCA5Q8WWZ7 1642 aa39.81■■■■□ 3.96
SLC25A39-206ENST00000585695 PBRM1Q86U86 1689 aa39.8■■■■□ 3.96
SLC25A39-206ENST00000585695 SYNJ2O15056 1496 aa39.72■■■■□ 3.95
SLC25A39-206ENST00000585695 RIMBP3CA6NJZ7 1639 aa39.72■■■■□ 3.95
SLC25A39-206ENST00000585695 RIMBP3BA6NNM3 1639 aa39.72■■■■□ 3.95
SLC25A39-206ENST00000585695 RIMBP3Q9UFD9 1639 aa39.72■■■■□ 3.95
SLC25A39-206ENST00000585695 ARHGEF11O15085 1522 aa39.67■■■■□ 3.94
SLC25A39-206ENST00000585695 CLASP1Q7Z460 1538 aa39.51■■■■□ 3.92
SLC25A39-206ENST00000585695 ADAMTS12P58397 1594 aa39.48■■■■□ 3.91
SLC25A39-206ENST00000585695 CYB5RLQ6IPT4 315 aa39.45■■■■□ 3.91
SLC25A39-206ENST00000585695 ERICH3Q5RHP9 1530 aa39.45■■■■□ 3.91
SLC25A39-206ENST00000585695 GRIN2AQ12879 1464 aa39.43■■■■□ 3.9
SLC25A39-206ENST00000585695 FHAD1B1AJZ9 1412 aa39.42■■■■□ 3.9
SLC25A39-206ENST00000585695 ARAP1Q96P48 1450 aa39.35■■■■□ 3.89
SLC25A39-206ENST00000585695 CEP170Q5SW79 1584 aa39.27■■■■□ 3.88
SLC25A39-206ENST00000585695 KIF27Q86VH2 1401 aa39.27■■■■□ 3.88
SLC25A39-206ENST00000585695 NUP160Q12769 1436 aa39.24■■■■□ 3.87
SLC25A39-206ENST00000585695 IGF1RP08069 1367 aa39.2■■■■□ 3.87
SLC25A39-206ENST00000585695 ERCC6L2Q5T890 1561 aa39.04■■■■□ 3.84
SLC25A39-206ENST00000585695 CUL7Q14999 1698 aa39■■■■□ 3.83
SLC25A39-206ENST00000585695 CARMIL1Q5VZK9 1371 aa38.96■■■■□ 3.83
SLC25A39-206ENST00000585695 SHROOM2Q13796 1616 aa38.95■■■■□ 3.83
SLC25A39-206ENST00000585695 JPH4Q96JJ6 628 aa38.94■■■■□ 3.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms