RNA–Protein interactions for RNA: ENST00000599595.5

UBA52-214, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBA52, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-214ENST00000599595 NISCHQ9Y2I1 1504 aa31.01■■■□□ 2.55
UBA52-214ENST00000599595 ABCC9O60706 1549 aa28.05■■■□□ 2.08
UBA52-214ENST00000599595 DNAJC5BQ9UF47 199 aa27.65■■■□□ 2.02
UBA52-214ENST00000599595 CCDC180Q9P1Z9 1646 aa27.46■■□□□ 1.99
UBA52-214ENST00000599595 DNAJC5Q9H3Z4 198 aa26.41■■□□□ 1.82
UBA52-214ENST00000599595 RB1CC1Q8TDY2 1594 aa26.11■■□□□ 1.77
UBA52-214ENST00000599595 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
UBA52-214ENST00000599595 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
UBA52-214ENST00000599595 NACADO15069 1562 aa25.8■■□□□ 1.72
UBA52-214ENST00000599595 DCAF1Q9Y4B6 1507 aa25.68■■□□□ 1.7
UBA52-214ENST00000599595 DCAF8L2P0C7V8 631 aa25.67■■□□□ 1.7
UBA52-214ENST00000599595 MYO15BQ96JP2 1530 aa25.64■■□□□ 1.7
UBA52-214ENST00000599595 CECR2Q9BXF3 1484 aa25.45■■□□□ 1.66
UBA52-214ENST00000599595 BICRAQ9NZM4 1560 aa25.44■■□□□ 1.66
UBA52-214ENST00000599595 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
UBA52-214ENST00000599595 CC2D2AQ9P2K1 1620 aa25.27■■□□□ 1.64
UBA52-214ENST00000599595 SCRIBQ14160 1630 aa25.06■■□□□ 1.6
UBA52-214ENST00000599595 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
UBA52-214ENST00000599595 EIF4G1Q04637 1599 aaKnown RBP24.9■■□□□ 1.58
UBA52-214ENST00000599595 CUX2O14529 1486 aa24.81■■□□□ 1.56
UBA52-214ENST00000599595 TRIM41Q8WV44 630 aa24.54■■□□□ 1.52
UBA52-214ENST00000599595 ERCC6Q03468 1493 aa24.29■■□□□ 1.48
UBA52-214ENST00000599595 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
UBA52-214ENST00000599595 BAZ1AQ9NRL2 1556 aaPredicted RBP24■■□□□ 1.43
UBA52-214ENST00000599595 MROH2BQ7Z745 1585 aa23.92■■□□□ 1.42
UBA52-214ENST00000599595 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
UBA52-214ENST00000599595 PEG3Q9GZU2 1588 aa23.78■■□□□ 1.4
UBA52-214ENST00000599595 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
UBA52-214ENST00000599595 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
UBA52-214ENST00000599595 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
UBA52-214ENST00000599595 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
UBA52-214ENST00000599595 NESP48681 1621 aa23.72■■□□□ 1.39
UBA52-214ENST00000599595 WIZO95785 1651 aa23.72■■□□□ 1.39
UBA52-214ENST00000599595 HMGXB3Q12766 1538 aa23.63■■□□□ 1.37
UBA52-214ENST00000599595 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
UBA52-214ENST00000599595 OSCARQ8IYS5 282 aa23.46■■□□□ 1.35
UBA52-214ENST00000599595 TOP2AP11388 1531 aaKnown RBP23.44■■□□□ 1.34
UBA52-214ENST00000599595 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
UBA52-214ENST00000599595 SUPT5HO00267 1087 aaKnown RBP23.36■■□□□ 1.33
UBA52-214ENST00000599595 LAMC3Q9Y6N6 1575 aa23.35■■□□□ 1.33
UBA52-214ENST00000599595 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
UBA52-214ENST00000599595 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
UBA52-214ENST00000599595 RIMBP3CA6NJZ7 1639 aa23.22■■□□□ 1.31
UBA52-214ENST00000599595 RIMBP3BA6NNM3 1639 aa23.22■■□□□ 1.31
UBA52-214ENST00000599595 RIMBP3Q9UFD9 1639 aa23.22■■□□□ 1.31
UBA52-214ENST00000599595 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
UBA52-214ENST00000599595 WDR62O43379 1518 aa23.14■■□□□ 1.3
UBA52-214ENST00000599595 MRC2Q9UBG0 1479 aa23.14■■□□□ 1.29
UBA52-214ENST00000599595 TRHP20396 242 aaPredicted RBP23.1■■□□□ 1.29
UBA52-214ENST00000599595 CADPSQ9ULU8 1353 aa23.1■■□□□ 1.29
UBA52-214ENST00000599595 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
UBA52-214ENST00000599595 CYB5RLQ6IPT4 315 aa22.96■■□□□ 1.27
UBA52-214ENST00000599595 CFTRP13569 1480 aa22.95■■□□□ 1.26
UBA52-214ENST00000599595 PRDM2Q13029 1718 aa22.93■■□□□ 1.26
UBA52-214ENST00000599595 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
UBA52-214ENST00000599595 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
UBA52-214ENST00000599595 ILDR1Q86SU0 546 aaPredicted RBP22.75■■□□□ 1.23
UBA52-214ENST00000599595 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
UBA52-214ENST00000599595 URB2Q14146 1524 aaKnown RBP22.63■■□□□ 1.21
UBA52-214ENST00000599595 ZNF608Q9ULD9 1512 aaPredicted RBP22.47■■□□□ 1.19
UBA52-214ENST00000599595 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
UBA52-214ENST00000599595 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
UBA52-214ENST00000599595 TOPBP1Q92547 1522 aa22.43■■□□□ 1.18
UBA52-214ENST00000599595 CUX1P39880 1505 aa22.42■■□□□ 1.18
UBA52-214ENST00000599595 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
UBA52-214ENST00000599595 BIVM-ERCC5R4GMW8 1640 aa22.36■■□□□ 1.17
UBA52-214ENST00000599595 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.17
UBA52-214ENST00000599595 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
UBA52-214ENST00000599595 TOP2BQ02880 1626 aa22.33■■□□□ 1.17
UBA52-214ENST00000599595 POLA1P09884 1462 aaPredicted RBP22.27■■□□□ 1.16
UBA52-214ENST00000599595 FGD5Q6ZNL6 1462 aa22.27■■□□□ 1.16
UBA52-214ENST00000599595 CHD1O14646 1710 aa22.26■■□□□ 1.15
UBA52-214ENST00000599595 EIF4G3O43432 1585 aaKnown RBP22.23■■□□□ 1.15
UBA52-214ENST00000599595 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.15
UBA52-214ENST00000599595 FBLN2P98095 1184 aa22.18■■□□□ 1.14
UBA52-214ENST00000599595 RAD54L2Q9Y4B4 1467 aa22.16■■□□□ 1.14
UBA52-214ENST00000599595 WDR97A6NE52 1622 aa22.16■■□□□ 1.14
UBA52-214ENST00000599595 AQRO60306 1485 aaKnown RBP eCLIP22.15■■□□□ 1.142e-8■■■■■ 38.7
UBA52-214ENST00000599595 SOGA1O94964 1423 aa22.14■■□□□ 1.13
UBA52-214ENST00000599595 CLASP1Q7Z460 1538 aa22.1■■□□□ 1.13
UBA52-214ENST00000599595 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
UBA52-214ENST00000599595 KDM4FA0A1W2PPD8 638 aa22.06■■□□□ 1.12
UBA52-214ENST00000599595 CHIC1Q5VXU3 224 aa22.05■■□□□ 1.12
UBA52-214ENST00000599595 TDRD9Q8NDG6 1382 aaKnown RBP22.02■■□□□ 1.12
UBA52-214ENST00000599595 ABCA5Q8WWZ7 1642 aa21.99■■□□□ 1.11
UBA52-214ENST00000599595 GAPVD1Q14C86 1478 aa21.96■■□□□ 1.11
UBA52-214ENST00000599595 PBRM1Q86U86 1689 aa21.94■■□□□ 1.1
UBA52-214ENST00000599595 SNAPC4Q5SXM2 1469 aa21.93■■□□□ 1.1
UBA52-214ENST00000599595 GRIN2BQ13224 1484 aa21.88■■□□□ 1.09
UBA52-214ENST00000599595 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
UBA52-214ENST00000599595 CHMP7Q8WUX9 453 aaPredicted RBP21.87■■□□□ 1.09
UBA52-214ENST00000599595 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
UBA52-214ENST00000599595 RUSC2Q8N2Y8 1516 aa21.84■■□□□ 1.09
UBA52-214ENST00000599595 ERICH3Q5RHP9 1530 aa21.81■■□□□ 1.08
UBA52-214ENST00000599595 SYNJ2O15056 1496 aa21.81■■□□□ 1.08
UBA52-214ENST00000599595 KIF13AQ9H1H9 1805 aa21.76■■□□□ 1.07
UBA52-214ENST00000599595 ADAMTS12P58397 1594 aa21.74■■□□□ 1.07
UBA52-214ENST00000599595 FBXO41Q8TF61 875 aa21.73■■□□□ 1.07
UBA52-214ENST00000599595 IGF1RP08069 1367 aa21.73■■□□□ 1.07
UBA52-214ENST00000599595 ERCC6L2Q5T890 1561 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms