RNA–Protein interactions for RNA: ENST00000598814.1

UBA52-211, Transcript of ubiquitin A-52 residue ribosomal protein fusion product 1, humanhuman

TSL 1 (best)

Gene UBA52, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52-211ENST00000598814 NISCHQ9Y2I1 1504 aa39.64■■■■□ 3.94
UBA52-211ENST00000598814 ABCC9O60706 1549 aa35.93■■■■□ 3.34
UBA52-211ENST00000598814 CCDC180Q9P1Z9 1646 aa35.67■■■■□ 3.3
UBA52-211ENST00000598814 RB1CC1Q8TDY2 1594 aa34.1■■■■□ 3.05
UBA52-211ENST00000598814 DNAJC5BQ9UF47 199 aa34■■■■□ 3.03
UBA52-211ENST00000598814 NACADO15069 1562 aa33.83■■■■□ 3.01
UBA52-211ENST00000598814 DCAF8L2P0C7V8 631 aa33.48■■■□□ 2.95
UBA52-211ENST00000598814 PABPN1Q86U42 306 aaKnown RBP eCLIP33.4■■■□□ 2.94
UBA52-211ENST00000598814 MYO15BQ96JP2 1530 aa33.33■■■□□ 2.93
UBA52-211ENST00000598814 UNC13AQ9UPW8 1703 aa33.22■■■□□ 2.91
UBA52-211ENST00000598814 BICRAQ9NZM4 1560 aa33.13■■■□□ 2.89
UBA52-211ENST00000598814 ZCCHC6Q5VYS8 1495 aaKnown RBP32.8■■■□□ 2.84
UBA52-211ENST00000598814 DCAF1Q9Y4B6 1507 aa32.78■■■□□ 2.84
UBA52-211ENST00000598814 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
UBA52-211ENST00000598814 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
UBA52-211ENST00000598814 CECR2Q9BXF3 1484 aa32.43■■■□□ 2.78
UBA52-211ENST00000598814 SCRIBQ14160 1630 aa32.42■■■□□ 2.78
UBA52-211ENST00000598814 EIF4G1Q04637 1599 aaKnown RBP32.33■■■□□ 2.77
UBA52-211ENST00000598814 DNAJC5Q9H3Z4 198 aa31.48■■■□□ 2.63
UBA52-211ENST00000598814 NCAPD3P42695 1498 aa31.27■■■□□ 2.6
UBA52-211ENST00000598814 CUX2O14529 1486 aa31.15■■■□□ 2.58
UBA52-211ENST00000598814 ATAD2BQ9ULI0 1458 aa31.09■■■□□ 2.57
UBA52-211ENST00000598814 ERCC6Q03468 1493 aa31.04■■■□□ 2.56
UBA52-211ENST00000598814 SMARCA2P51531 1590 aa30.98■■■□□ 2.55
UBA52-211ENST00000598814 HMGXB3Q12766 1538 aa30.98■■■□□ 2.55
UBA52-211ENST00000598814 SMARCA4P51532 1647 aa30.95■■■□□ 2.54
UBA52-211ENST00000598814 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
UBA52-211ENST00000598814 NESP48681 1621 aa30.77■■■□□ 2.52
UBA52-211ENST00000598814 BAZ1BQ9UIG0 1483 aaKnown RBP30.75■■■□□ 2.51
UBA52-211ENST00000598814 PEG3Q9GZU2 1588 aa30.71■■■□□ 2.51
UBA52-211ENST00000598814 LAMC3Q9Y6N6 1575 aa30.56■■■□□ 2.48
UBA52-211ENST00000598814 THOC2Q8NI27 1593 aaKnown RBP30.54■■■□□ 2.48
UBA52-211ENST00000598814 MROH2BQ7Z745 1585 aa30.51■■■□□ 2.47
UBA52-211ENST00000598814 PDS5BQ9NTI5 1447 aa30.42■■■□□ 2.46
UBA52-211ENST00000598814 KIF21AQ7Z4S6 1674 aa30.32■■■□□ 2.44
UBA52-211ENST00000598814 CADPSQ9ULU8 1353 aa30.28■■■□□ 2.44
UBA52-211ENST00000598814 MRC2Q9UBG0 1479 aa30.15■■■□□ 2.42
UBA52-211ENST00000598814 WDR62O43379 1518 aa30.1■■■□□ 2.41
UBA52-211ENST00000598814 WIZO95785 1651 aa30.07■■■□□ 2.41
UBA52-211ENST00000598814 CEP164Q9UPV0 1460 aa29.96■■■□□ 2.39
UBA52-211ENST00000598814 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
UBA52-211ENST00000598814 CFTRP13569 1480 aa29.88■■■□□ 2.37
UBA52-211ENST00000598814 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
UBA52-211ENST00000598814 RSF1Q96T23 1441 aaPredicted RBP29.8■■■□□ 2.36
UBA52-211ENST00000598814 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
UBA52-211ENST00000598814 URB2Q14146 1524 aaKnown RBP29.67■■■□□ 2.34
UBA52-211ENST00000598814 OSCARQ8IYS5 282 aa29.67■■■□□ 2.34
UBA52-211ENST00000598814 PRDM2Q13029 1718 aa29.43■■■□□ 2.3
UBA52-211ENST00000598814 CCDC88BA6NC98 1476 aa29.41■■■□□ 2.3
UBA52-211ENST00000598814 IFT140Q96RY7 1462 aa29.4■■■□□ 2.3
UBA52-211ENST00000598814 ZNF608Q9ULD9 1512 aaPredicted RBP29.35■■■□□ 2.29
UBA52-211ENST00000598814 TOPBP1Q92547 1522 aa29.3■■■□□ 2.28
UBA52-211ENST00000598814 ABCC8Q09428 1581 aa29.26■■■□□ 2.28
UBA52-211ENST00000598814 RIMBP3CA6NJZ7 1639 aa29.25■■■□□ 2.27
UBA52-211ENST00000598814 RIMBP3BA6NNM3 1639 aa29.25■■■□□ 2.27
UBA52-211ENST00000598814 RIMBP3Q9UFD9 1639 aa29.25■■■□□ 2.27
UBA52-211ENST00000598814 ARHGEF11O15085 1522 aa29.17■■■□□ 2.26
UBA52-211ENST00000598814 DNMBPQ6XZF7 1577 aa29.17■■■□□ 2.26
UBA52-211ENST00000598814 EIF4G3O43432 1585 aaKnown RBP29.14■■■□□ 2.26
UBA52-211ENST00000598814 TARBP1Q13395 1621 aaKnown RBP29.06■■■□□ 2.24
UBA52-211ENST00000598814 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.244e-8■■■■■ 30.6
UBA52-211ENST00000598814 POLA1P09884 1462 aaPredicted RBP28.99■■■□□ 2.23
UBA52-211ENST00000598814 CYB5RLQ6IPT4 315 aa28.96■■■□□ 2.23
UBA52-211ENST00000598814 CHD1O14646 1710 aa28.93■■■□□ 2.22
UBA52-211ENST00000598814 FBLN2P98095 1184 aa28.87■■■□□ 2.21
UBA52-211ENST00000598814 ARAP1Q96P48 1450 aa28.86■■■□□ 2.21
UBA52-211ENST00000598814 RAD54L2Q9Y4B4 1467 aa28.86■■■□□ 2.21
UBA52-211ENST00000598814 SOGA1O94964 1423 aa28.85■■■□□ 2.21
UBA52-211ENST00000598814 TDRD9Q8NDG6 1382 aaKnown RBP28.82■■■□□ 2.2
UBA52-211ENST00000598814 WDR97A6NE52 1622 aa28.8■■■□□ 2.2
UBA52-211ENST00000598814 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
UBA52-211ENST00000598814 SNAPC4Q5SXM2 1469 aa28.73■■■□□ 2.19
UBA52-211ENST00000598814 CLASP1Q7Z460 1538 aa28.69■■■□□ 2.18
UBA52-211ENST00000598814 TRHP20396 242 aaPredicted RBP28.69■■■□□ 2.18
UBA52-211ENST00000598814 MAGI1Q96QZ7 1491 aaPredicted RBP28.69■■■□□ 2.18
UBA52-211ENST00000598814 CUX1P39880 1505 aa28.68■■■□□ 2.18
UBA52-211ENST00000598814 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
UBA52-211ENST00000598814 GRIN2BQ13224 1484 aa28.66■■■□□ 2.18
UBA52-211ENST00000598814 SYNJ1O43426 1573 aa28.62■■■□□ 2.17
UBA52-211ENST00000598814 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
UBA52-211ENST00000598814 GAPVD1Q14C86 1478 aa28.49■■■□□ 2.15
UBA52-211ENST00000598814 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
UBA52-211ENST00000598814 PBRM1Q86U86 1689 aa28.42■■■□□ 2.14
UBA52-211ENST00000598814 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
UBA52-211ENST00000598814 GRIN2AQ12879 1464 aa28.27■■■□□ 2.12
UBA52-211ENST00000598814 WRNQ14191 1432 aaPredicted RBP eCLIP28.27■■■□□ 2.122e-16■□□□□ 8
UBA52-211ENST00000598814 NUP160Q12769 1436 aa28.22■■■□□ 2.11
UBA52-211ENST00000598814 ADAMTS12P58397 1594 aa28.2■■■□□ 2.1
UBA52-211ENST00000598814 ERCC6L2Q5T890 1561 aa28.17■■■□□ 2.1
UBA52-211ENST00000598814 SUPT5HO00267 1087 aaKnown RBP28.17■■■□□ 2.1
UBA52-211ENST00000598814 CEP170Q5SW79 1584 aa28.16■■■□□ 2.1
UBA52-211ENST00000598814 FHAD1B1AJZ9 1412 aa28.15■■■□□ 2.1
UBA52-211ENST00000598814 TOP2BQ02880 1626 aa28.14■■■□□ 2.1
UBA52-211ENST00000598814 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
UBA52-211ENST00000598814 SHROOM2Q13796 1616 aa28.09■■■□□ 2.09
UBA52-211ENST00000598814 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.08
UBA52-211ENST00000598814 AEBP2Q6ZN18 517 aaPredicted RBP28.07■■■□□ 2.08
UBA52-211ENST00000598814 PRG4Q92954 1404 aaPredicted RBP27.93■■■□□ 2.06
UBA52-211ENST00000598814 JPH4Q96JJ6 628 aa27.91■■■□□ 2.06
UBA52-211ENST00000598814 RUSC2Q8N2Y8 1516 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms