Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 AP1G1-215ENST00000568327 1724 ntTSL 517.22■□□□□ 0.356e-7■□□□□ 8.5
LSM11P83369 AP1G1-205ENST00000563104 882 ntTSL 416.37■□□□□ 0.216e-7■□□□□ 8.5
LSM11P83369 AP1G1-214ENST00000567583 606 ntTSL 216.37■□□□□ 0.216e-7■□□□□ 8.5
LSM11P83369 AP1G1-210ENST00000565412 619 ntTSL 316.14■□□□□ 0.176e-7■□□□□ 8.5
LSM11P83369 AP1G1-219ENST00000569975 561 ntTSL 415.97■□□□□ 0.156e-7■□□□□ 8.5
LSM11P83369 AP1G1-206ENST00000563259 844 ntTSL 414.57□□□□□ -0.086e-7■□□□□ 8.5
LSM11P83369 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.43□□□□□ -0.266e-7■□□□□ 8.5
LSM11P83369 AP1G1-208ENST00000565009 2494 ntTSL 512.93□□□□□ -0.346e-7■□□□□ 8.5
LSM11P83369 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.74□□□□□ -0.376e-7■□□□□ 8.5
LSM11P83369 TRIT1-205ENST00000462797 2000 ntTSL 512.33□□□□□ -0.436e-7■□□□□ 8.5
LSM11P83369 AP1G1-203ENST00000450149 1166 ntTSL 211.89□□□□□ -0.516e-7■□□□□ 8.5
LSM11P83369 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.546e-7■□□□□ 8.5
LSM11P83369 AP1G1-217ENST00000569185 559 ntTSL 311.63□□□□□ -0.556e-7■□□□□ 8.5
LSM11P83369 AP1G1-222ENST00000570297 604 ntTSL 411.33□□□□□ -0.66e-7■□□□□ 8.5
LSM11P83369 AP1G1-218ENST00000569748 4554 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.646e-7■□□□□ 8.5
LSM11P83369 AP1G1-212ENST00000566161 989 ntTSL 410.34□□□□□ -0.756e-7■□□□□ 8.5
LSM11P83369 AP1G1-202ENST00000393512 3593 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.946e-7■□□□□ 8.5
LSM11P83369 TRIT1-203ENST00000441669 1851 ntTSL 1 (best) BASIC8.12□□□□□ -1.116e-7■□□□□ 8.5
LSM11P83369 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.246e-7■□□□□ 8.5
LSM11P83369 NASP-221ENST00000531612 938 ntAPPRIS ALT2 TSL 59.62□□□□□ -0.871e-8■□□□□ 8.5
LSM11P83369 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.951e-8■□□□□ 8.5
LSM11P83369 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.981e-8■□□□□ 8.5
LSM11P83369 NASP-223ENST00000534450 632 ntTSL 28.6□□□□□ -1.031e-8■□□□□ 8.5
LSM11P83369 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.141e-8■□□□□ 8.5
LSM11P83369 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.161e-8■□□□□ 8.5
LSM11P83369 NASP-218ENST00000530073 2740 ntTSL 27.22□□□□□ -1.251e-8■□□□□ 8.5
LSM11P83369 NASP-210ENST00000481782 3659 ntTSL 26.97□□□□□ -1.291e-8■□□□□ 8.5
LSM11P83369 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.2■■□□□ 1.38e-8■□□□□ 8.5
LSM11P83369 AKAP8L-203ENST00000594594 2251 ntTSL 521.48■■□□□ 1.038e-8■□□□□ 8.5
LSM11P83369 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.538e-8■□□□□ 8.5
LSM11P83369 AKAP8L-220ENST00000609519 2113 ntTSL 218.26■□□□□ 0.518e-8■□□□□ 8.5
LSM11P83369 AKAP8L-202ENST00000593845 2749 ntTSL 217.13■□□□□ 0.338e-8■□□□□ 8.5
LSM11P83369 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.814e-7■□□□□ 8.5
LSM11P83369 BAX-207ENST00000502487 1346 ntTSL 1 (best)23.15■■□□□ 1.34e-7■□□□□ 8.5
LSM11P83369 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.24e-7■□□□□ 8.5
LSM11P83369 ILF3-216ENST00000589600 839 ntTSL 521.81■■□□□ 1.084e-7■□□□□ 8.5
LSM11P83369 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.084e-7■□□□□ 8.5
LSM11P83369 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.06■□□□□ 0.964e-7■□□□□ 8.5
LSM11P83369 BAX-211ENST00000513545 775 ntTSL 318.88■□□□□ 0.614e-7■□□□□ 8.5
LSM11P83369 HSF1-214ENST00000614796 1724 ntTSL 517.86■□□□□ 0.454e-7■□□□□ 8.5
LSM11P83369 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.324e-7■□□□□ 8.5
LSM11P83369 HSF1-202ENST00000527328 2336 ntTSL 216.34■□□□□ 0.214e-7■□□□□ 8.5
LSM11P83369 PFAS-202ENST00000546020 2652 ntTSL 215.67■□□□□ 0.14e-7■□□□□ 8.5
LSM11P83369 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.014e-7■□□□□ 8.5
LSM11P83369 BAX-209ENST00000506183 383 ntTSL 1 (best)14.94□□□□□ -0.024e-7■□□□□ 8.5
LSM11P83369 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.46□□□□□ -0.094e-7■□□□□ 8.5
LSM11P83369 ILF3-209ENST00000587941 533 ntTSL 214.2□□□□□ -0.144e-7■□□□□ 8.5
LSM11P83369 BAX-204ENST00000356483 677 ntTSL 1 (best)14.12□□□□□ -0.154e-7■□□□□ 8.5
LSM11P83369 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.12□□□□□ -0.154e-7■□□□□ 8.5
LSM11P83369 ILF3-214ENST00000589416 773 ntTSL 413.95□□□□□ -0.184e-7■□□□□ 8.5
LSM11P83369 ILF3-207ENST00000587840 655 ntTSL 513.61□□□□□ -0.234e-7■□□□□ 8.5
LSM11P83369 ILF3-206ENST00000587505 791 ntTSL 513.36□□□□□ -0.274e-7■□□□□ 8.5
LSM11P83369 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.35□□□□□ -0.274e-7■□□□□ 8.5
LSM11P83369 BAX-205ENST00000391871 687 ntTSL 5 BASIC12.68□□□□□ -0.384e-7■□□□□ 8.5
LSM11P83369 HSF1-210ENST00000532338 3451 ntTSL 212.61□□□□□ -0.394e-7■□□□□ 8.5
LSM11P83369 ILF3-218ENST00000590009 953 ntTSL 512.27□□□□□ -0.454e-7■□□□□ 8.5
LSM11P83369 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.484e-7■□□□□ 8.5
LSM11P83369 PFAS-205ENST00000580356 4242 ntTSL 211.88□□□□□ -0.514e-7■□□□□ 8.5
LSM11P83369 ILF3-213ENST00000589283 599 ntTSL 311.73□□□□□ -0.534e-7■□□□□ 8.5
LSM11P83369 ILF3-211ENST00000589052 637 ntTSL 510.65□□□□□ -0.74e-7■□□□□ 8.5
LSM11P83369 ILF3-224ENST00000593199 413 ntTSL 39.45□□□□□ -0.94e-7■□□□□ 8.5
LSM11P83369 CCNL2-212ENST00000480646 614 ntTSL 312.53□□□□□ -0.41e-8■□□□□ 8.5
LSM11P83369 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.432e-15■□□□□ 8.4
LSM11P83369 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.422e-15■□□□□ 8.4
LSM11P83369 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.532e-15■□□□□ 8.4
LSM11P83369 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC11.2□□□□□ -0.622e-15■□□□□ 8.4
LSM11P83369 INTS11-223ENST00000498173 1589 ntTSL 219.87■□□□□ 0.777e-7■□□□□ 8.4
LSM11P83369 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.47■□□□□ 0.557e-7■□□□□ 8.4
LSM11P83369 INTS11-235ENST00000527719 750 ntTSL 517.44■□□□□ 0.387e-7■□□□□ 8.4
LSM11P83369 NDUFV1-207ENST00000526169 774 ntTSL 1 (best)17.27■□□□□ 0.362e-7■□□□□ 8.4
LSM11P83369 INTS11-221ENST00000496353 2428 ntTSL 217.15■□□□□ 0.347e-7■□□□□ 8.4
LSM11P83369 INTS11-219ENST00000490853 704 ntTSL 316.83■□□□□ 0.287e-7■□□□□ 8.4
LSM11P83369 INTS11-220ENST00000493534 896 ntTSL 316.83■□□□□ 0.287e-7■□□□□ 8.4
LSM11P83369 INTS11-224ENST00000498476 554 ntTSL 416.64■□□□□ 0.257e-7■□□□□ 8.4
LSM11P83369 INTS11-230ENST00000526332 579 ntTSL 416.64■□□□□ 0.257e-7■□□□□ 8.4
LSM11P83369 INTS11-239ENST00000531019 549 ntTSL 416.64■□□□□ 0.257e-7■□□□□ 8.4
LSM11P83369 AP3D1-209ENST00000591284 580 ntTSL 516.63■□□□□ 0.257e-7■□□□□ 8.4
LSM11P83369 INTS11-215ENST00000470679 584 ntTSL 516.26■□□□□ 0.197e-7■□□□□ 8.4
LSM11P83369 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.124e-10■□□□□ 8.4
LSM11P83369 INTS11-218ENST00000488042 1134 ntTSL 215.81■□□□□ 0.127e-7■□□□□ 8.4
LSM11P83369 INTS11-207ENST00000434694 1056 ntTSL 515.64■□□□□ 0.097e-7■□□□□ 8.4
LSM11P83369 INTS11-237ENST00000530031 800 ntTSL 515.58■□□□□ 0.087e-7■□□□□ 8.4
LSM11P83369 TMC6-220ENST00000591756 475 ntTSL 215.46■□□□□ 0.078e-8■□□□□ 8.4
LSM11P83369 LTBP4-229ENST00000601032 2019 ntTSL 1 (best)15.41■□□□□ 0.064e-10■□□□□ 8.4
LSM11P83369 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 04e-10■□□□□ 8.4
LSM11P83369 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 07e-7■□□□□ 8.4
LSM11P83369 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.027e-7■□□□□ 8.4
LSM11P83369 HIST2H2BF-203ENST00000469483 752 ntTSL 1 (best)14.59□□□□□ -0.077e-7■□□□□ 8.4
LSM11P83369 INTS11-232ENST00000526904 551 ntTSL 414.53□□□□□ -0.087e-7■□□□□ 8.4
LSM11P83369 LTBP4-225ENST00000599225 281 ntTSL 313.97□□□□□ -0.174e-10■□□□□ 8.4
LSM11P83369 INTS11-206ENST00000430786 849 ntTSL 513.6□□□□□ -0.237e-7■□□□□ 8.4
LSM11P83369 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.36□□□□□ -0.277e-7■□□□□ 8.4
LSM11P83369 INTS11-226ENST00000525285 579 ntTSL 413.24□□□□□ -0.297e-7■□□□□ 8.4
LSM11P83369 INTS11-227ENST00000525603 738 ntTSL 312.51□□□□□ -0.417e-7■□□□□ 8.4
LSM11P83369 INTS11-229ENST00000526113 591 ntTSL 512.21□□□□□ -0.457e-7■□□□□ 8.4
LSM11P83369 INTS11-244ENST00000532952 773 ntTSL 312.12□□□□□ -0.477e-7■□□□□ 8.4
LSM11P83369 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC11.68□□□□□ -0.547e-7■□□□□ 8.4
LSM11P83369 INTS11-231ENST00000526797 659 ntTSL 411.08□□□□□ -0.647e-7■□□□□ 8.4
LSM11P83369 INTS11-246ENST00000534345 485 ntTSL 410.83□□□□□ -0.687e-7■□□□□ 8.4
LSM11P83369 TMC6-217ENST00000590934 386 ntTSL 510.7□□□□□ -0.78e-8■□□□□ 8.4
Retrieved 100 of 11,495 protein–RNA pairs in 172.8 ms