RNA–Protein interactions for RNA: ENST00000528450.5

SLC43A1-204, Transcript of solute carrier family 43 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC43A1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1-204ENST00000528450 NISCHQ9Y2I1 1504 aa34.7■■■■□ 3.15
SLC43A1-204ENST00000528450 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
SLC43A1-204ENST00000528450 ZCCHC6Q5VYS8 1495 aaKnown RBP29.22■■■□□ 2.27
SLC43A1-204ENST00000528450 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
SLC43A1-204ENST00000528450 DCAF8L2P0C7V8 631 aa29.04■■■□□ 2.24
SLC43A1-204ENST00000528450 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
SLC43A1-204ENST00000528450 SUPT5HO00267 1087 aaKnown RBP28.33■■■□□ 2.13
SLC43A1-204ENST00000528450 ABCC9O60706 1549 aa28.21■■■□□ 2.11
SLC43A1-204ENST00000528450 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
SLC43A1-204ENST00000528450 MYO15BQ96JP2 1530 aa27.83■■■□□ 2.05
SLC43A1-204ENST00000528450 NACADO15069 1562 aa27.69■■■□□ 2.02
SLC43A1-204ENST00000528450 RB1CC1Q8TDY2 1594 aa27.4■■□□□ 1.98
SLC43A1-204ENST00000528450 RSF1Q96T23 1441 aaPredicted RBP27.23■■□□□ 1.95
SLC43A1-204ENST00000528450 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
SLC43A1-204ENST00000528450 CECR2Q9BXF3 1484 aa27.15■■□□□ 1.94
SLC43A1-204ENST00000528450 UNC13AQ9UPW8 1703 aa27.03■■□□□ 1.92
SLC43A1-204ENST00000528450 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
SLC43A1-204ENST00000528450 PABPN1Q86U42 306 aaKnown RBP eCLIP26.86■■□□□ 1.892e-6■■□□□ 13.3
SLC43A1-204ENST00000528450 WIZO95785 1651 aa26.83■■□□□ 1.89
SLC43A1-204ENST00000528450 BAZ1AQ9NRL2 1556 aaPredicted RBP26.7■■□□□ 1.86
SLC43A1-204ENST00000528450 BICRAQ9NZM4 1560 aa26.68■■□□□ 1.86
SLC43A1-204ENST00000528450 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
SLC43A1-204ENST00000528450 HRCP23327 699 aa26.47■■□□□ 1.83
SLC43A1-204ENST00000528450 LOC105371045A0A1W2PR82 267 aa26.41■■□□□ 1.82
SLC43A1-204ENST00000528450 TRIM41Q8WV44 630 aa26.4■■□□□ 1.82
SLC43A1-204ENST00000528450 TOP2AP11388 1531 aaKnown RBP26.35■■□□□ 1.81
SLC43A1-204ENST00000528450 CCDC88BA6NC98 1476 aa26.24■■□□□ 1.79
SLC43A1-204ENST00000528450 FAM9AQ8IZU1 332 aaPredicted RBP26.22■■□□□ 1.79
SLC43A1-204ENST00000528450 SMARCA2P51531 1590 aa26.2■■□□□ 1.78
SLC43A1-204ENST00000528450 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
SLC43A1-204ENST00000528450 EHMT2Q96KQ7 1210 aa26.06■■□□□ 1.76
SLC43A1-204ENST00000528450 PEG3Q9GZU2 1588 aa26.05■■□□□ 1.76
SLC43A1-204ENST00000528450 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
SLC43A1-204ENST00000528450 ABCC8Q09428 1581 aa26■■□□□ 1.75
SLC43A1-204ENST00000528450 BAZ1BQ9UIG0 1483 aaKnown RBP25.95■■□□□ 1.74
SLC43A1-204ENST00000528450 PCGF6Q9BYE7 350 aa25.82■■□□□ 1.72
SLC43A1-204ENST00000528450 PPARGC1BQ86YN6 1023 aaKnown RBP25.66■■□□□ 1.7
SLC43A1-204ENST00000528450 NCAPD3P42695 1498 aa25.62■■□□□ 1.69
SLC43A1-204ENST00000528450 SOGA1O94964 1423 aa25.61■■□□□ 1.69
SLC43A1-204ENST00000528450 WRNQ14191 1432 aaPredicted RBP eCLIP25.6■■□□□ 1.69
SLC43A1-204ENST00000528450 HMGXB3Q12766 1538 aa25.57■■□□□ 1.68
SLC43A1-204ENST00000528450 RUSC2Q8N2Y8 1516 aa25.54■■□□□ 1.68
SLC43A1-204ENST00000528450 SYNJ1O43426 1573 aa25.52■■□□□ 1.68
SLC43A1-204ENST00000528450 PELP1Q8IZL8 1130 aaKnown RBP25.41■■□□□ 1.66
SLC43A1-204ENST00000528450 CC2D2AQ9P2K1 1620 aa25.39■■□□□ 1.65
SLC43A1-204ENST00000528450 CSRNP3Q8WYN3 585 aa25.38■■□□□ 1.65
SLC43A1-204ENST00000528450 TRIM26Q12899 539 aaPredicted RBP25.33■■□□□ 1.65
SLC43A1-204ENST00000528450 EEA1Q15075 1411 aa25.28■■□□□ 1.64
SLC43A1-204ENST00000528450 UBTFP17480 764 aaKnown RBP25.26■■□□□ 1.63
SLC43A1-204ENST00000528450 CFTRP13569 1480 aa25.25■■□□□ 1.63
SLC43A1-204ENST00000528450 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
SLC43A1-204ENST00000528450 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
SLC43A1-204ENST00000528450 CUX1P39880 1505 aa25.16■■□□□ 1.62
SLC43A1-204ENST00000528450 BIVM-ERCC5R4GMW8 1640 aa25.15■■□□□ 1.62
SLC43A1-204ENST00000528450 TNIKQ9UKE5 1360 aa25.14■■□□□ 1.62
SLC43A1-204ENST00000528450 GOLGA3Q08378 1498 aa25.13■■□□□ 1.61
SLC43A1-204ENST00000528450 CADPSQ9ULU8 1353 aa25.1■■□□□ 1.61
SLC43A1-204ENST00000528450 ZEB1P37275 1124 aaPredicted RBP25.08■■□□□ 1.61
SLC43A1-204ENST00000528450 CEP164Q9UPV0 1460 aa25.04■■□□□ 1.6
SLC43A1-204ENST00000528450 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
SLC43A1-204ENST00000528450 PRDM2Q13029 1718 aa25.04■■□□□ 1.6
SLC43A1-204ENST00000528450 KIF21BO75037 1637 aa25.01■■□□□ 1.59
SLC43A1-204ENST00000528450 RAPGEF2Q9Y4G8 1499 aa25.01■■□□□ 1.59
SLC43A1-204ENST00000528450 RANGAP1P46060 587 aaPredicted RBP25.01■■□□□ 1.59
SLC43A1-204ENST00000528450 DNAJC5BQ9UF47 199 aa24.97■■□□□ 1.59
SLC43A1-204ENST00000528450 NESP48681 1621 aa24.95■■□□□ 1.58
SLC43A1-204ENST00000528450 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
SLC43A1-204ENST00000528450 KIF27Q86VH2 1401 aa24.85■■□□□ 1.57
SLC43A1-204ENST00000528450 CLIP1P30622 1438 aa24.83■■□□□ 1.57
SLC43A1-204ENST00000528450 SCAF1Q9H7N4 1312 aaKnown RBP24.83■■□□□ 1.57
SLC43A1-204ENST00000528450 FGD5Q6ZNL6 1462 aa24.81■■□□□ 1.56
SLC43A1-204ENST00000528450 PRXQ9BXM0 1461 aa24.8■■□□□ 1.56
SLC43A1-204ENST00000528450 CUX2O14529 1486 aa24.78■■□□□ 1.56
SLC43A1-204ENST00000528450 ERICH3Q5RHP9 1530 aa24.71■■□□□ 1.55
SLC43A1-204ENST00000528450 RAD54L2Q9Y4B4 1467 aa24.66■■□□□ 1.54
SLC43A1-204ENST00000528450 IGF1RP08069 1367 aa24.65■■□□□ 1.54
SLC43A1-204ENST00000528450 TOPBP1Q92547 1522 aa24.65■■□□□ 1.54
SLC43A1-204ENST00000528450 DNMBPQ6XZF7 1577 aa24.64■■□□□ 1.53
SLC43A1-204ENST00000528450 LAMC3Q9Y6N6 1575 aa24.64■■□□□ 1.53
SLC43A1-204ENST00000528450 VPS8Q8N3P4 1428 aa24.62■■□□□ 1.53
SLC43A1-204ENST00000528450 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
SLC43A1-204ENST00000528450 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
SLC43A1-204ENST00000528450 CARMIL1Q5VZK9 1371 aa24.54■■□□□ 1.52
SLC43A1-204ENST00000528450 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
SLC43A1-204ENST00000528450 ARAP1Q96P48 1450 aa24.52■■□□□ 1.52
SLC43A1-204ENST00000528450 APLP2Q06481 763 aa24.51■■□□□ 1.51
SLC43A1-204ENST00000528450 KIF21AQ7Z4S6 1674 aa24.51■■□□□ 1.51
SLC43A1-204ENST00000528450 PDS5BQ9NTI5 1447 aa24.5■■□□□ 1.51
SLC43A1-204ENST00000528450 ABCA10Q8WWZ4 1543 aa24.47■■□□□ 1.51
SLC43A1-204ENST00000528450 MYT1Q01538 1121 aa24.43■■□□□ 1.5
SLC43A1-204ENST00000528450 ARHGAP35Q9NRY4 1499 aa24.41■■□□□ 1.5
SLC43A1-204ENST00000528450 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
SLC43A1-204ENST00000528450 CCER1Q8TC90 406 aaPredicted RBP24.38■■□□□ 1.49
SLC43A1-204ENST00000528450 ACIN1Q9UKV3 1341 aaKnown RBP24.36■■□□□ 1.49
SLC43A1-204ENST00000528450 HNRNPUL2Q1KMD3 747 aaKnown RBP24.34■■□□□ 1.49
SLC43A1-204ENST00000528450 KANK4Q5T7N3 995 aaPredicted RBP24.34■■□□□ 1.49
SLC43A1-204ENST00000528450 P3H3Q8IVL6 736 aa24.32■■□□□ 1.48
SLC43A1-204ENST00000528450 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
SLC43A1-204ENST00000528450 GAPVD1Q14C86 1478 aa24.24■■□□□ 1.47
SLC43A1-204ENST00000528450 ABCA5Q8WWZ7 1642 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms