Protein–RNA interactions for Protein: O14618

CCS, Copper chaperone for superoxide dismutase, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSO14618 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.33■□□□□ 0.04
CCSO14618 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.33■□□□□ 0.04
CCSO14618 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCSO14618 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCSO14618 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCSO14618 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.33■□□□□ 0.04
CCSO14618 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCSO14618 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCSO14618 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCSO14618 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.32■□□□□ 0.04
CCSO14618 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.32■□□□□ 0.04
CCSO14618 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.32■□□□□ 0.04
CCSO14618 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCSO14618 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CCSO14618 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.32■□□□□ 0.04
CCSO14618 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.32■□□□□ 0.04
CCSO14618 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.32■□□□□ 0.04
CCSO14618 DUX4L16-201ENST00000555130 1264 ntBASIC15.32■□□□□ 0.04
CCSO14618 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.32■□□□□ 0.04
CCSO14618 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.32■□□□□ 0.04
CCSO14618 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CCSO14618 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.32■□□□□ 0.04
CCSO14618 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 AC112777.1-201ENST00000540175 1423 ntBASIC15.32■□□□□ 0.04
CCSO14618 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCSO14618 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.32■□□□□ 0.04
CCSO14618 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 AL023806.1-201ENST00000603994 1649 ntBASIC15.32■□□□□ 0.04
CCSO14618 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCSO14618 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCSO14618 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CCSO14618 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.31■□□□□ 0.04
CCSO14618 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCSO14618 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CCSO14618 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCSO14618 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.31■□□□□ 0.04
CCSO14618 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.31■□□□□ 0.04
CCSO14618 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 TUBB8P6-201ENST00000436895 1288 ntBASIC15.31■□□□□ 0.04
CCSO14618 AC093787.1-201ENST00000450396 207 ntBASIC15.31■□□□□ 0.04
CCSO14618 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.31■□□□□ 0.04
CCSO14618 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 AC006557.6-201ENST00000623071 864 ntBASIC15.31■□□□□ 0.04
CCSO14618 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
CCSO14618 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CCSO14618 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.31■□□□□ 0.04
CCSO14618 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CCSO14618 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CCSO14618 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CCSO14618 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CCSO14618 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CCSO14618 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.3■□□□□ 0.04
CCSO14618 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CCSO14618 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms