RNA–Protein interactions for RNA: ENST00000394479.3

REL-202, Transcript of REL proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene REL, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
REL-202ENST00000394479 NISCHQ9Y2I1 1504 aa35.53■■■■□ 3.28
REL-202ENST00000394479 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
REL-202ENST00000394479 ZCCHC6Q5VYS8 1495 aaKnown RBP29.85■■■□□ 2.37
REL-202ENST00000394479 SHROOM4Q9ULL8 1493 aa29.81■■■□□ 2.36
REL-202ENST00000394479 DCAF8L2P0C7V8 631 aa29.57■■■□□ 2.32
REL-202ENST00000394479 SUPT5HO00267 1087 aaKnown RBP29.35■■■□□ 2.29
REL-202ENST00000394479 ABCC9O60706 1549 aa29.33■■■□□ 2.29
REL-202ENST00000394479 DCAF1Q9Y4B6 1507 aa29.23■■■□□ 2.27
REL-202ENST00000394479 MYO15BQ96JP2 1530 aa28.8■■■□□ 2.2
REL-202ENST00000394479 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.19
REL-202ENST00000394479 NACADO15069 1562 aa28.7■■■□□ 2.18
REL-202ENST00000394479 SCRIBQ14160 1630 aa28.57■■■□□ 2.16
REL-202ENST00000394479 RB1CC1Q8TDY2 1594 aa28.46■■■□□ 2.15
REL-202ENST00000394479 HRCP23327 699 aa28.35■■■□□ 2.13
REL-202ENST00000394479 PCGF6Q9BYE7 350 aa28.16■■■□□ 2.1
REL-202ENST00000394479 UNC13AQ9UPW8 1703 aa28.01■■■□□ 2.07
REL-202ENST00000394479 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
REL-202ENST00000394479 PPARGC1BQ86YN6 1023 aaKnown RBP27.87■■■□□ 2.05
REL-202ENST00000394479 PABPN1Q86U42 306 aaKnown RBP eCLIP27.76■■■□□ 2.03
REL-202ENST00000394479 CECR2Q9BXF3 1484 aa27.75■■■□□ 2.03
REL-202ENST00000394479 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
REL-202ENST00000394479 RSF1Q96T23 1441 aaPredicted RBP27.66■■■□□ 2.02
REL-202ENST00000394479 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
REL-202ENST00000394479 TRIM26Q12899 539 aaPredicted RBP27.44■■□□□ 1.98
REL-202ENST00000394479 BAZ1AQ9NRL2 1556 aaPredicted RBP27.38■■□□□ 1.97
REL-202ENST00000394479 WIZO95785 1651 aa27.34■■□□□ 1.97
REL-202ENST00000394479 SMARCA4P51532 1647 aa27.29■■□□□ 1.96
REL-202ENST00000394479 TRIM41Q8WV44 630 aa27.23■■□□□ 1.95
REL-202ENST00000394479 FAM9AQ8IZU1 332 aaPredicted RBP27.14■■□□□ 1.93
REL-202ENST00000394479 EHMT2Q96KQ7 1210 aa26.97■■□□□ 1.91
REL-202ENST00000394479 TOP2AP11388 1531 aaKnown RBP26.93■■□□□ 1.9
REL-202ENST00000394479 PEG3Q9GZU2 1588 aa26.87■■□□□ 1.89
REL-202ENST00000394479 ZEB1P37275 1124 aaPredicted RBP26.85■■□□□ 1.89
REL-202ENST00000394479 ATAD2BQ9ULI0 1458 aa26.85■■□□□ 1.89
REL-202ENST00000394479 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
REL-202ENST00000394479 CCDC88BA6NC98 1476 aa26.75■■□□□ 1.87
REL-202ENST00000394479 SMARCA2P51531 1590 aa26.74■■□□□ 1.87
REL-202ENST00000394479 BAZ1BQ9UIG0 1483 aaKnown RBP26.69■■□□□ 1.86
REL-202ENST00000394479 NCAPD3P42695 1498 aa26.54■■□□□ 1.84
REL-202ENST00000394479 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
REL-202ENST00000394479 CC2D2AQ9P2K1 1620 aa26.46■■□□□ 1.83
REL-202ENST00000394479 PELP1Q8IZL8 1130 aaKnown RBP26.44■■□□□ 1.82
REL-202ENST00000394479 SCAF1Q9H7N4 1312 aaKnown RBP26.41■■□□□ 1.82
REL-202ENST00000394479 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.4■■□□□ 1.82
REL-202ENST00000394479 ABCC8Q09428 1581 aa26.35■■□□□ 1.81
REL-202ENST00000394479 CCER1Q8TC90 406 aaPredicted RBP26.24■■□□□ 1.79
REL-202ENST00000394479 SOGA1O94964 1423 aa26.17■■□□□ 1.78
REL-202ENST00000394479 TTBK1Q5TCY1 1321 aaPredicted RBP26.17■■□□□ 1.78
REL-202ENST00000394479 WRNQ14191 1432 aaPredicted RBP eCLIP26.15■■□□□ 1.78
REL-202ENST00000394479 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
REL-202ENST00000394479 RUSC2Q8N2Y8 1516 aa26.08■■□□□ 1.77
REL-202ENST00000394479 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
REL-202ENST00000394479 TNIKQ9UKE5 1360 aa26.02■■□□□ 1.76
REL-202ENST00000394479 CFTRP13569 1480 aa26.01■■□□□ 1.75
REL-202ENST00000394479 NEUROD1Q13562 356 aa25.98■■□□□ 1.75
REL-202ENST00000394479 CSRNP3Q8WYN3 585 aa25.96■■□□□ 1.75
REL-202ENST00000394479 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
REL-202ENST00000394479 ACIN1Q9UKV3 1341 aaKnown RBP25.95■■□□□ 1.74
REL-202ENST00000394479 DIEXFQ68CQ4 756 aaKnown RBP25.93■■□□□ 1.74
REL-202ENST00000394479 CADPSQ9ULU8 1353 aa25.91■■□□□ 1.74
REL-202ENST00000394479 UBTFP17480 764 aaKnown RBP25.89■■□□□ 1.73
REL-202ENST00000394479 EEA1Q15075 1411 aa25.86■■□□□ 1.73
REL-202ENST00000394479 NESP48681 1621 aa25.81■■□□□ 1.72
REL-202ENST00000394479 PRDM2Q13029 1718 aa25.79■■□□□ 1.72
REL-202ENST00000394479 GOLGA3Q08378 1498 aa25.78■■□□□ 1.72
REL-202ENST00000394479 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
REL-202ENST00000394479 CUX1P39880 1505 aa25.73■■□□□ 1.71
REL-202ENST00000394479 GTF3C3Q9Y5Q9 886 aa25.69■■□□□ 1.7
REL-202ENST00000394479 BIVM-ERCC5R4GMW8 1640 aa25.69■■□□□ 1.7
REL-202ENST00000394479 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
REL-202ENST00000394479 ZNF316A6NFI3 1004 aaPredicted RBP25.63■■□□□ 1.69
REL-202ENST00000394479 CENPBP07199 599 aaPredicted RBP25.6■■□□□ 1.69
REL-202ENST00000394479 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
REL-202ENST00000394479 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
REL-202ENST00000394479 HNRNPUL2Q1KMD3 747 aaKnown RBP25.59■■□□□ 1.69
REL-202ENST00000394479 KIF21BO75037 1637 aa25.58■■□□□ 1.69
REL-202ENST00000394479 CLIP1P30622 1438 aa25.54■■□□□ 1.68
REL-202ENST00000394479 RAPGEF2Q9Y4G8 1499 aa25.49■■□□□ 1.67
REL-202ENST00000394479 VPS8Q8N3P4 1428 aa25.47■■□□□ 1.67
REL-202ENST00000394479 MYT1Q01538 1121 aa25.45■■□□□ 1.66
REL-202ENST00000394479 FGD5Q6ZNL6 1462 aa25.43■■□□□ 1.66
REL-202ENST00000394479 MIER1Q8N108 512 aa25.42■■□□□ 1.66
REL-202ENST00000394479 PDS5BQ9NTI5 1447 aa25.41■■□□□ 1.66
REL-202ENST00000394479 RANGAP1P46060 587 aaPredicted RBP25.4■■□□□ 1.66
REL-202ENST00000394479 KIF21AQ7Z4S6 1674 aa25.4■■□□□ 1.66
REL-202ENST00000394479 YTHDC1Q96MU7 727 aaKnown RBP25.39■■□□□ 1.66
REL-202ENST00000394479 TOPBP1Q92547 1522 aa25.38■■□□□ 1.65
REL-202ENST00000394479 DNMBPQ6XZF7 1577 aa25.38■■□□□ 1.65
REL-202ENST00000394479 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
REL-202ENST00000394479 KIF27Q86VH2 1401 aa25.29■■□□□ 1.64
REL-202ENST00000394479 CUX2O14529 1486 aa25.29■■□□□ 1.64
REL-202ENST00000394479 RAD54L2Q9Y4B4 1467 aa25.29■■□□□ 1.64
REL-202ENST00000394479 POLA1P09884 1462 aaPredicted RBP25.28■■□□□ 1.64
REL-202ENST00000394479 APLP2Q06481 763 aa25.26■■□□□ 1.63
REL-202ENST00000394479 PRXQ9BXM0 1461 aa25.17■■□□□ 1.62
REL-202ENST00000394479 ARAP1Q96P48 1450 aa25.16■■□□□ 1.62
REL-202ENST00000394479 KANK4Q5T7N3 995 aaPredicted RBP25.15■■□□□ 1.62
REL-202ENST00000394479 IGF1RP08069 1367 aa25.13■■□□□ 1.61
REL-202ENST00000394479 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
REL-202ENST00000394479 DHX57Q6P158 1386 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms