RNA–Protein interactions for RNA: ENST00000368198.7

SH2D2A-201, Transcript of SH2 domain containing 2A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SH2D2A, Length 1,599 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2A-201ENST00000368198 NISCHQ9Y2I1 1504 aa41.57■■■■■ 4.25
SH2D2A-201ENST00000368198 CCDC180Q9P1Z9 1646 aa36.62■■■■□ 3.45
SH2D2A-201ENST00000368198 ABCC9O60706 1549 aa35.44■■■■□ 3.26
SH2D2A-201ENST00000368198 ZCCHC6Q5VYS8 1495 aaKnown RBP34.72■■■■□ 3.15
SH2D2A-201ENST00000368198 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
SH2D2A-201ENST00000368198 DCAF1Q9Y4B6 1507 aa34.34■■■■□ 3.09
SH2D2A-201ENST00000368198 NACADO15069 1562 aa34.33■■■■□ 3.09
SH2D2A-201ENST00000368198 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
SH2D2A-201ENST00000368198 RB1CC1Q8TDY2 1594 aa34.23■■■■□ 3.07
SH2D2A-201ENST00000368198 SCRIBQ14160 1630 aa33.57■■■□□ 2.97
SH2D2A-201ENST00000368198 UNC13AQ9UPW8 1703 aa33.51■■■□□ 2.96
SH2D2A-201ENST00000368198 SHROOM4Q9ULL8 1493 aa33.32■■■□□ 2.92
SH2D2A-201ENST00000368198 PABPN1Q86U42 306 aaKnown RBP eCLIP33.28■■■□□ 2.92
SH2D2A-201ENST00000368198 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
SH2D2A-201ENST00000368198 CECR2Q9BXF3 1484 aa32.39■■■□□ 2.78
SH2D2A-201ENST00000368198 EIF4G1Q04637 1599 aaKnown RBP32.29■■■□□ 2.76
SH2D2A-201ENST00000368198 BAZ1AQ9NRL2 1556 aaPredicted RBP32.14■■■□□ 2.74
SH2D2A-201ENST00000368198 SMARCA4P51532 1647 aa32.13■■■□□ 2.73
SH2D2A-201ENST00000368198 DNAJC5BQ9UF47 199 aa32.1■■■□□ 2.73
SH2D2A-201ENST00000368198 MROH2BQ7Z745 1585 aa32.09■■■□□ 2.73
SH2D2A-201ENST00000368198 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
SH2D2A-201ENST00000368198 CC2D2AQ9P2K1 1620 aa32.04■■■□□ 2.72
SH2D2A-201ENST00000368198 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
SH2D2A-201ENST00000368198 ATAD2BQ9ULI0 1458 aa31.83■■■□□ 2.69
SH2D2A-201ENST00000368198 WIZO95785 1651 aa31.78■■■□□ 2.68
SH2D2A-201ENST00000368198 SMARCA2P51531 1590 aa31.76■■■□□ 2.68
SH2D2A-201ENST00000368198 PEG3Q9GZU2 1588 aa31.75■■■□□ 2.67
SH2D2A-201ENST00000368198 NCAPD3P42695 1498 aa31.7■■■□□ 2.67
SH2D2A-201ENST00000368198 BAZ1BQ9UIG0 1483 aaKnown RBP31.58■■■□□ 2.65
SH2D2A-201ENST00000368198 HMGXB3Q12766 1538 aa31.55■■■□□ 2.64
SH2D2A-201ENST00000368198 TOP2AP11388 1531 aaKnown RBP31.4■■■□□ 2.62
SH2D2A-201ENST00000368198 CCDC88BA6NC98 1476 aa31.1■■■□□ 2.57
SH2D2A-201ENST00000368198 NESP48681 1621 aa30.86■■■□□ 2.53
SH2D2A-201ENST00000368198 CHIC1Q5VXU3 224 aa30.85■■■□□ 2.53
SH2D2A-201ENST00000368198 CADPSQ9ULU8 1353 aa30.83■■■□□ 2.53
SH2D2A-201ENST00000368198 CFTRP13569 1480 aa30.75■■■□□ 2.51
SH2D2A-201ENST00000368198 LAMC3Q9Y6N6 1575 aa30.74■■■□□ 2.51
SH2D2A-201ENST00000368198 PDS5BQ9NTI5 1447 aa30.54■■■□□ 2.48
SH2D2A-201ENST00000368198 PRDM2Q13029 1718 aa30.5■■■□□ 2.47
SH2D2A-201ENST00000368198 FANCD2Q9BXW9 1451 aa30.48■■■□□ 2.47
SH2D2A-201ENST00000368198 ERCC6Q03468 1493 aa30.45■■■□□ 2.47
SH2D2A-201ENST00000368198 KIF21AQ7Z4S6 1674 aa30.45■■■□□ 2.46
SH2D2A-201ENST00000368198 CEP164Q9UPV0 1460 aa30.37■■■□□ 2.45
SH2D2A-201ENST00000368198 MRC2Q9UBG0 1479 aa30.2■■■□□ 2.43
SH2D2A-201ENST00000368198 THOC2Q8NI27 1593 aaKnown RBP30.18■■■□□ 2.42
SH2D2A-201ENST00000368198 TRIM41Q8WV44 630 aa30.16■■■□□ 2.42
SH2D2A-201ENST00000368198 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
SH2D2A-201ENST00000368198 ABCC8Q09428 1581 aa30.16■■■□□ 2.42
SH2D2A-201ENST00000368198 WDR62O43379 1518 aa30.06■■■□□ 2.4
SH2D2A-201ENST00000368198 WRNQ14191 1432 aaPredicted RBP eCLIP30.06■■■□□ 2.4
SH2D2A-201ENST00000368198 CUX1P39880 1505 aa30.06■■■□□ 2.4
SH2D2A-201ENST00000368198 TOPBP1Q92547 1522 aa30.05■■■□□ 2.4
SH2D2A-201ENST00000368198 DNMBPQ6XZF7 1577 aa30.03■■■□□ 2.4
SH2D2A-201ENST00000368198 SYNJ1O43426 1573 aa29.97■■■□□ 2.39
SH2D2A-201ENST00000368198 TOP2BQ02880 1626 aa29.9■■■□□ 2.38
SH2D2A-201ENST00000368198 BIVM-ERCC5R4GMW8 1640 aa29.89■■■□□ 2.38
SH2D2A-201ENST00000368198 CUX2O14529 1486 aa29.87■■■□□ 2.37
SH2D2A-201ENST00000368198 FGD5Q6ZNL6 1462 aa29.86■■■□□ 2.37
SH2D2A-201ENST00000368198 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
SH2D2A-201ENST00000368198 RAD54L2Q9Y4B4 1467 aa29.76■■■□□ 2.35
SH2D2A-201ENST00000368198 SOGA1O94964 1423 aa29.75■■■□□ 2.35
SH2D2A-201ENST00000368198 IFT140Q96RY7 1462 aa29.69■■■□□ 2.34
SH2D2A-201ENST00000368198 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
SH2D2A-201ENST00000368198 LOC105371045A0A1W2PR82 267 aa29.64■■■□□ 2.33
SH2D2A-201ENST00000368198 ZNF608Q9ULD9 1512 aaPredicted RBP29.59■■■□□ 2.33
SH2D2A-201ENST00000368198 FAM9AQ8IZU1 332 aaPredicted RBP29.57■■■□□ 2.32
SH2D2A-201ENST00000368198 ABCA10Q8WWZ4 1543 aa29.56■■■□□ 2.32
SH2D2A-201ENST00000368198 TDRD9Q8NDG6 1382 aaKnown RBP29.55■■■□□ 2.32
SH2D2A-201ENST00000368198 WDR97A6NE52 1622 aa29.54■■■□□ 2.32
SH2D2A-201ENST00000368198 AQRO60306 1485 aaKnown RBP eCLIP29.5■■■□□ 2.31
SH2D2A-201ENST00000368198 EIF4G3O43432 1585 aaKnown RBP29.44■■■□□ 2.3
SH2D2A-201ENST00000368198 EEA1Q15075 1411 aa29.43■■■□□ 2.3
SH2D2A-201ENST00000368198 GAPVD1Q14C86 1478 aa29.4■■■□□ 2.3
SH2D2A-201ENST00000368198 ABCA5Q8WWZ7 1642 aa29.39■■■□□ 2.3
SH2D2A-201ENST00000368198 RUSC2Q8N2Y8 1516 aa29.39■■■□□ 2.29
SH2D2A-201ENST00000368198 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
SH2D2A-201ENST00000368198 GRIN2BQ13224 1484 aa29.29■■■□□ 2.28
SH2D2A-201ENST00000368198 PBRM1Q86U86 1689 aa29.27■■■□□ 2.28
SH2D2A-201ENST00000368198 IGF1RP08069 1367 aa29.23■■■□□ 2.27
SH2D2A-201ENST00000368198 SNAPC4Q5SXM2 1469 aa29.21■■■□□ 2.27
SH2D2A-201ENST00000368198 CSRNP3Q8WYN3 585 aa29.2■■■□□ 2.26
SH2D2A-201ENST00000368198 ERICH3Q5RHP9 1530 aa29.2■■■□□ 2.26
SH2D2A-201ENST00000368198 MAGI1Q96QZ7 1491 aaPredicted RBP29.12■■■□□ 2.25
SH2D2A-201ENST00000368198 EHMT2Q96KQ7 1210 aa29.1■■■□□ 2.25
SH2D2A-201ENST00000368198 ADAMTS12P58397 1594 aa29.07■■■□□ 2.24
SH2D2A-201ENST00000368198 FBLN2P98095 1184 aa29.07■■■□□ 2.24
SH2D2A-201ENST00000368198 FHAD1B1AJZ9 1412 aa29.06■■■□□ 2.24
SH2D2A-201ENST00000368198 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
SH2D2A-201ENST00000368198 CHMP7Q8WUX9 453 aaPredicted RBP29.04■■■□□ 2.24
SH2D2A-201ENST00000368198 SYNJ2O15056 1496 aa29.03■■■□□ 2.24
SH2D2A-201ENST00000368198 CUL7Q14999 1698 aa29.02■■■□□ 2.24
SH2D2A-201ENST00000368198 KIF21BO75037 1637 aa29.01■■■□□ 2.24
SH2D2A-201ENST00000368198 GOLGA3Q08378 1498 aa29.01■■■□□ 2.23
SH2D2A-201ENST00000368198 CHD1O14646 1710 aa28.97■■■□□ 2.23
SH2D2A-201ENST00000368198 TNIKQ9UKE5 1360 aa28.97■■■□□ 2.23
SH2D2A-201ENST00000368198 PRXQ9BXM0 1461 aa28.96■■■□□ 2.23
SH2D2A-201ENST00000368198 GRIN2AQ12879 1464 aa28.92■■■□□ 2.22
SH2D2A-201ENST00000368198 RAPGEF2Q9Y4G8 1499 aa28.92■■■□□ 2.22
SH2D2A-201ENST00000368198 UBTFP17480 764 aaKnown RBP28.84■■■□□ 2.21
SH2D2A-201ENST00000368198 OSCARQ8IYS5 282 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms