RNA–Protein interactions for RNA: ENST00000544017.5

TIMM50-202, Transcript of translocase of inner mitochondrial membrane 50, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TIMM50, Length 2,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM50-202ENST00000544017 NISCHQ9Y2I1 1504 aa37.78■■■■□ 3.64
TIMM50-202ENST00000544017 CCDC180Q9P1Z9 1646 aa32.45■■■□□ 2.79
TIMM50-202ENST00000544017 ZCCHC6Q5VYS8 1495 aaKnown RBP31.77■■■□□ 2.68
TIMM50-202ENST00000544017 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
TIMM50-202ENST00000544017 DCAF8L2P0C7V8 631 aa31.65■■■□□ 2.66
TIMM50-202ENST00000544017 DCAF1Q9Y4B6 1507 aa30.95■■■□□ 2.55
TIMM50-202ENST00000544017 ABCC9O60706 1549 aa30.86■■■□□ 2.53
TIMM50-202ENST00000544017 SUPT5HO00267 1087 aaKnown RBP30.67■■■□□ 2.5
TIMM50-202ENST00000544017 MYO15BQ96JP2 1530 aa30.36■■■□□ 2.45
TIMM50-202ENST00000544017 SCRIBQ14160 1630 aa30.34■■■□□ 2.45
TIMM50-202ENST00000544017 NACADO15069 1562 aa30.21■■■□□ 2.43
TIMM50-202ENST00000544017 RB1CC1Q8TDY2 1594 aa29.91■■■□□ 2.38
TIMM50-202ENST00000544017 RSF1Q96T23 1441 aaPredicted RBP29.6■■■□□ 2.33
TIMM50-202ENST00000544017 CECR2Q9BXF3 1484 aa29.58■■■□□ 2.33
TIMM50-202ENST00000544017 UNC13AQ9UPW8 1703 aa29.5■■■□□ 2.31
TIMM50-202ENST00000544017 PELP1Q8IZL8 1130 aaKnown RBP29.48■■■□□ 2.31
TIMM50-202ENST00000544017 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
TIMM50-202ENST00000544017 PABPN1Q86U42 306 aaKnown RBP eCLIP29.39■■■□□ 2.29
TIMM50-202ENST00000544017 MROH2BQ7Z745 1585 aa29.36■■■□□ 2.29
TIMM50-202ENST00000544017 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
TIMM50-202ENST00000544017 WIZO95785 1651 aa29.16■■■□□ 2.26
TIMM50-202ENST00000544017 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
TIMM50-202ENST00000544017 SMARCA4P51532 1647 aa28.93■■■□□ 2.22
TIMM50-202ENST00000544017 MYT1Q01538 1121 aa28.68■■■□□ 2.18
TIMM50-202ENST00000544017 TOP2AP11388 1531 aaKnown RBP28.63■■■□□ 2.17
TIMM50-202ENST00000544017 TRIM41Q8WV44 630 aa28.6■■■□□ 2.17
TIMM50-202ENST00000544017 HRCP23327 699 aa28.59■■■□□ 2.17
TIMM50-202ENST00000544017 LOC105371045A0A1W2PR82 267 aa28.55■■■□□ 2.16
TIMM50-202ENST00000544017 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
TIMM50-202ENST00000544017 SMARCA2P51531 1590 aa28.48■■■□□ 2.15
TIMM50-202ENST00000544017 ATAD2BQ9ULI0 1458 aa28.41■■■□□ 2.14
TIMM50-202ENST00000544017 PEG3Q9GZU2 1588 aa28.4■■■□□ 2.14
TIMM50-202ENST00000544017 FAM9AQ8IZU1 332 aaPredicted RBP28.38■■■□□ 2.13
TIMM50-202ENST00000544017 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.13
TIMM50-202ENST00000544017 BAZ1BQ9UIG0 1483 aaKnown RBP28.27■■■□□ 2.12
TIMM50-202ENST00000544017 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
TIMM50-202ENST00000544017 EHMT2Q96KQ7 1210 aa28.2■■■□□ 2.11
TIMM50-202ENST00000544017 PPARGC1BQ86YN6 1023 aaKnown RBP28.09■■■□□ 2.09
TIMM50-202ENST00000544017 NCAPD3P42695 1498 aa28■■■□□ 2.07
TIMM50-202ENST00000544017 SCAF1Q9H7N4 1312 aaKnown RBP27.89■■■□□ 2.06
TIMM50-202ENST00000544017 HMGXB3Q12766 1538 aa27.88■■■□□ 2.05
TIMM50-202ENST00000544017 WRNQ14191 1432 aaPredicted RBP eCLIP27.81■■■□□ 2.04
TIMM50-202ENST00000544017 SOGA1O94964 1423 aa27.8■■■□□ 2.04
TIMM50-202ENST00000544017 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
TIMM50-202ENST00000544017 RUSC2Q8N2Y8 1516 aa27.73■■■□□ 2.03
TIMM50-202ENST00000544017 SYNJ1O43426 1573 aa27.71■■■□□ 2.03
TIMM50-202ENST00000544017 PCGF6Q9BYE7 350 aa27.65■■■□□ 2.02
TIMM50-202ENST00000544017 CFTRP13569 1480 aa27.55■■■□□ 2
TIMM50-202ENST00000544017 CSRNP3Q8WYN3 585 aa27.55■■■□□ 2
TIMM50-202ENST00000544017 DNAJC5BQ9UF47 199 aa27.45■■□□□ 1.98
TIMM50-202ENST00000544017 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
TIMM50-202ENST00000544017 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
TIMM50-202ENST00000544017 EEA1Q15075 1411 aa27.38■■□□□ 1.97
TIMM50-202ENST00000544017 UBTFP17480 764 aaKnown RBP27.37■■□□□ 1.97
TIMM50-202ENST00000544017 CUX1P39880 1505 aa27.37■■□□□ 1.97
TIMM50-202ENST00000544017 BIVM-ERCC5R4GMW8 1640 aa27.32■■□□□ 1.96
TIMM50-202ENST00000544017 TTBK1Q5TCY1 1321 aaPredicted RBP27.31■■□□□ 1.96
TIMM50-202ENST00000544017 NESP48681 1621 aa27.26■■□□□ 1.96
TIMM50-202ENST00000544017 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
TIMM50-202ENST00000544017 PRDM2Q13029 1718 aa27.22■■□□□ 1.95
TIMM50-202ENST00000544017 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
TIMM50-202ENST00000544017 CEP162Q5TB80 1403 aa27.22■■□□□ 1.95
TIMM50-202ENST00000544017 GOLGA3Q08378 1498 aa27.2■■□□□ 1.94
TIMM50-202ENST00000544017 RAPGEF2Q9Y4G8 1499 aa27.14■■□□□ 1.94
TIMM50-202ENST00000544017 FANCD2Q9BXW9 1451 aa27.14■■□□□ 1.93
TIMM50-202ENST00000544017 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
TIMM50-202ENST00000544017 RANGAP1P46060 587 aaPredicted RBP27.12■■□□□ 1.93
TIMM50-202ENST00000544017 KIF21BO75037 1637 aa27.08■■□□□ 1.93
TIMM50-202ENST00000544017 FGD5Q6ZNL6 1462 aa27.01■■□□□ 1.91
TIMM50-202ENST00000544017 KIF27Q86VH2 1401 aa27■■□□□ 1.91
TIMM50-202ENST00000544017 CUX2O14529 1486 aa26.95■■□□□ 1.9
TIMM50-202ENST00000544017 PRKCSHP14314 528 aaPredicted RBP26.95■■□□□ 1.9
TIMM50-202ENST00000544017 PRXQ9BXM0 1461 aa26.94■■□□□ 1.9
TIMM50-202ENST00000544017 LAMC3Q9Y6N6 1575 aa26.9■■□□□ 1.9
TIMM50-202ENST00000544017 BCL11AQ9H165 835 aa26.9■■□□□ 1.9
TIMM50-202ENST00000544017 CLIP1P30622 1438 aa26.89■■□□□ 1.89
TIMM50-202ENST00000544017 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
TIMM50-202ENST00000544017 TOPBP1Q92547 1522 aa26.87■■□□□ 1.89
TIMM50-202ENST00000544017 IGF1RP08069 1367 aa26.85■■□□□ 1.89
TIMM50-202ENST00000544017 DNMBPQ6XZF7 1577 aa26.83■■□□□ 1.89
TIMM50-202ENST00000544017 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
TIMM50-202ENST00000544017 URB2Q14146 1524 aaKnown RBP26.8■■□□□ 1.88
TIMM50-202ENST00000544017 ERICH3Q5RHP9 1530 aa26.79■■□□□ 1.88
TIMM50-202ENST00000544017 PDS5BQ9NTI5 1447 aa26.77■■□□□ 1.88
TIMM50-202ENST00000544017 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
TIMM50-202ENST00000544017 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.86
TIMM50-202ENST00000544017 CARMIL1Q5VZK9 1371 aa26.69■■□□□ 1.86
TIMM50-202ENST00000544017 ABCA10Q8WWZ4 1543 aa26.65■■□□□ 1.86
TIMM50-202ENST00000544017 VPS8Q8N3P4 1428 aa26.64■■□□□ 1.86
TIMM50-202ENST00000544017 NEUROD1Q13562 356 aa26.63■■□□□ 1.85
TIMM50-202ENST00000544017 TDRD9Q8NDG6 1382 aaKnown RBP26.63■■□□□ 1.85
TIMM50-202ENST00000544017 GTF3C3Q9Y5Q9 886 aa26.6■■□□□ 1.85
TIMM50-202ENST00000544017 ARAP1Q96P48 1450 aa26.56■■□□□ 1.84
TIMM50-202ENST00000544017 APLP2Q06481 763 aa26.51■■□□□ 1.83
TIMM50-202ENST00000544017 ARHGAP35Q9NRY4 1499 aa26.49■■□□□ 1.83
TIMM50-202ENST00000544017 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
TIMM50-202ENST00000544017 P3H3Q8IVL6 736 aa26.44■■□□□ 1.82
TIMM50-202ENST00000544017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.43■■□□□ 1.82
TIMM50-202ENST00000544017 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
TIMM50-202ENST00000544017 CENPBP07199 599 aaPredicted RBP26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms