Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD8Q9HCK8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD8Q9HCK8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD8Q9HCK8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHD8Q9HCK8 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.99■■□□□ 1.43
CHD8Q9HCK8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.99■■□□□ 1.43
CHD8Q9HCK8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD8Q9HCK8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC23.99■■□□□ 1.43
CHD8Q9HCK8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD8Q9HCK8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD8Q9HCK8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.98■■□□□ 1.43
CHD8Q9HCK8 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHD8Q9HCK8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD8Q9HCK8 AC026271.2-201ENST00000428091 497 ntBASIC23.97■■□□□ 1.43
CHD8Q9HCK8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHD8Q9HCK8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.97■■□□□ 1.43
CHD8Q9HCK8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD8Q9HCK8 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHD8Q9HCK8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD8Q9HCK8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHD8Q9HCK8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CHD8Q9HCK8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHD8Q9HCK8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CHD8Q9HCK8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CHD8Q9HCK8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CHD8Q9HCK8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.95■■□□□ 1.42
CHD8Q9HCK8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
CHD8Q9HCK8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC23.95■■□□□ 1.42
CHD8Q9HCK8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD8Q9HCK8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
CHD8Q9HCK8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
CHD8Q9HCK8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CHD8Q9HCK8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CHD8Q9HCK8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CHD8Q9HCK8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
CHD8Q9HCK8 AC120057.4-201ENST00000624722 1615 ntBASIC23.93■■□□□ 1.42
CHD8Q9HCK8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.93■■□□□ 1.42
CHD8Q9HCK8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CHD8Q9HCK8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD8Q9HCK8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.92■■□□□ 1.42
CHD8Q9HCK8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
CHD8Q9HCK8 RARRES2P6-201ENST00000567333 442 ntBASIC23.92■■□□□ 1.42
CHD8Q9HCK8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD8Q9HCK8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD8Q9HCK8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.92■■□□□ 1.42
CHD8Q9HCK8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.92■■□□□ 1.42
CHD8Q9HCK8 AC104564.3-201ENST00000582367 638 ntBASIC23.92■■□□□ 1.42
CHD8Q9HCK8 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD8Q9HCK8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD8Q9HCK8 AC131281.2-201ENST00000520478 145 ntBASIC23.91■■□□□ 1.42
CHD8Q9HCK8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.91■■□□□ 1.42
CHD8Q9HCK8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD8Q9HCK8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CHD8Q9HCK8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD8Q9HCK8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
CHD8Q9HCK8 AC110285.6-201ENST00000617652 491 ntBASIC23.9■■□□□ 1.42
CHD8Q9HCK8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.9■■□□□ 1.42
CHD8Q9HCK8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD8Q9HCK8 AC005837.3-201ENST00000612163 286 ntBASIC23.89■■□□□ 1.41
CHD8Q9HCK8 AC010864.1-201ENST00000609407 1511 ntBASIC23.88■■□□□ 1.41
CHD8Q9HCK8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CHD8Q9HCK8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.88■■□□□ 1.41
CHD8Q9HCK8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CHD8Q9HCK8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD8Q9HCK8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.87■■□□□ 1.41
CHD8Q9HCK8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.87■■□□□ 1.41
CHD8Q9HCK8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CHD8Q9HCK8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CHD8Q9HCK8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CHD8Q9HCK8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CHD8Q9HCK8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CHD8Q9HCK8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CHD8Q9HCK8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHD8Q9HCK8 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CHD8Q9HCK8 AC127502.1-201ENST00000399971 1502 ntBASIC23.84■■□□□ 1.41
CHD8Q9HCK8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.84■■□□□ 1.41
CHD8Q9HCK8 KRT125P-201ENST00000546827 989 ntBASIC23.84■■□□□ 1.41
CHD8Q9HCK8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.83■■□□□ 1.41
CHD8Q9HCK8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.83■■□□□ 1.41
CHD8Q9HCK8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CHD8Q9HCK8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.83■■□□□ 1.41
CHD8Q9HCK8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
CHD8Q9HCK8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.82■■□□□ 1.4
CHD8Q9HCK8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHD8Q9HCK8 ZNRF2P3-201ENST00000424200 374 ntBASIC23.82■■□□□ 1.4
CHD8Q9HCK8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.81■■□□□ 1.4
CHD8Q9HCK8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.81■■□□□ 1.4
CHD8Q9HCK8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHD8Q9HCK8 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CHD8Q9HCK8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CHD8Q9HCK8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms