Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCC1Q96S66 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLCC1Q96S66 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCC1Q96S66 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLCC1Q96S66 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCC1Q96S66 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCC1Q96S66 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCC1Q96S66 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCC1Q96S66 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCC1Q96S66 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCC1Q96S66 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCC1Q96S66 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCC1Q96S66 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCC1Q96S66 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCC1Q96S66 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCC1Q96S66 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCC1Q96S66 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCC1Q96S66 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCC1Q96S66 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCC1Q96S66 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCC1Q96S66 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.61■□□□□ 0.89
CLCC1Q96S66 AC044849.2-201ENST00000606596 710 ntBASIC20.61■□□□□ 0.89
CLCC1Q96S66 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
CLCC1Q96S66 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLCC1Q96S66 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCC1Q96S66 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCC1Q96S66 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCC1Q96S66 RPS2P35-201ENST00000443417 897 ntBASIC20.6■□□□□ 0.89
CLCC1Q96S66 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCC1Q96S66 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLCC1Q96S66 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCC1Q96S66 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CLCC1Q96S66 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCC1Q96S66 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.59■□□□□ 0.89
CLCC1Q96S66 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLCC1Q96S66 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CLCC1Q96S66 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLCC1Q96S66 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLCC1Q96S66 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCC1Q96S66 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.58■□□□□ 0.89
CLCC1Q96S66 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLCC1Q96S66 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCC1Q96S66 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCC1Q96S66 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCC1Q96S66 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCC1Q96S66 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCC1Q96S66 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CLCC1Q96S66 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCC1Q96S66 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCC1Q96S66 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CLCC1Q96S66 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLCC1Q96S66 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCC1Q96S66 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.57■□□□□ 0.88
CLCC1Q96S66 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCC1Q96S66 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.56■□□□□ 0.88
CLCC1Q96S66 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCC1Q96S66 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCC1Q96S66 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCC1Q96S66 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.56■□□□□ 0.88
CLCC1Q96S66 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.56■□□□□ 0.88
CLCC1Q96S66 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCC1Q96S66 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCC1Q96S66 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCC1Q96S66 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CLCC1Q96S66 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCC1Q96S66 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLCC1Q96S66 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCC1Q96S66 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLCC1Q96S66 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCC1Q96S66 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CLCC1Q96S66 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCC1Q96S66 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCC1Q96S66 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCC1Q96S66 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCC1Q96S66 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCC1Q96S66 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLCC1Q96S66 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCC1Q96S66 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.53■□□□□ 0.88
CLCC1Q96S66 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.53■□□□□ 0.88
CLCC1Q96S66 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCC1Q96S66 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCC1Q96S66 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCC1Q96S66 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCC1Q96S66 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.53■□□□□ 0.88
CLCC1Q96S66 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCC1Q96S66 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.52■□□□□ 0.88
CLCC1Q96S66 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCC1Q96S66 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CLCC1Q96S66 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.51■□□□□ 0.87
CLCC1Q96S66 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CLCC1Q96S66 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms