Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40CQ96S21 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40CQ96S21 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40CQ96S21 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40CQ96S21 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.09■□□□□ 0.81
RAB40CQ96S21 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40CQ96S21 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40CQ96S21 AC097358.2-201ENST00000607541 1159 ntBASIC20.09■□□□□ 0.81
RAB40CQ96S21 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40CQ96S21 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RAB40CQ96S21 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
RAB40CQ96S21 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB40CQ96S21 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.08■□□□□ 0.81
RAB40CQ96S21 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40CQ96S21 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RAB40CQ96S21 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40CQ96S21 AC135983.2-203ENST00000454486 1613 ntBASIC20.07■□□□□ 0.8
RAB40CQ96S21 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40CQ96S21 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40CQ96S21 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40CQ96S21 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RAB40CQ96S21 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RAB40CQ96S21 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40CQ96S21 AC093323.1-202ENST00000635031 2045 ntBASIC20.07■□□□□ 0.8
RAB40CQ96S21 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.06■□□□□ 0.8
RAB40CQ96S21 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40CQ96S21 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40CQ96S21 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40CQ96S21 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40CQ96S21 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40CQ96S21 AL391121.1-201ENST00000607967 1349 ntBASIC20.04■□□□□ 0.8
RAB40CQ96S21 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB40CQ96S21 AC136428.2-201ENST00000563187 214 ntBASIC20.04■□□□□ 0.8
RAB40CQ96S21 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40CQ96S21 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40CQ96S21 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB40CQ96S21 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB40CQ96S21 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40CQ96S21 AP004609.3-201ENST00000610705 1884 ntBASIC20.03■□□□□ 0.8
RAB40CQ96S21 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RAB40CQ96S21 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40CQ96S21 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB40CQ96S21 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40CQ96S21 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RAB40CQ96S21 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40CQ96S21 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40CQ96S21 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40CQ96S21 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40CQ96S21 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40CQ96S21 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RAB40CQ96S21 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB40CQ96S21 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB40CQ96S21 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40CQ96S21 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB40CQ96S21 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40CQ96S21 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40CQ96S21 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB40CQ96S21 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB40CQ96S21 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.01■□□□□ 0.79
RAB40CQ96S21 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40CQ96S21 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40CQ96S21 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40CQ96S21 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20■□□□□ 0.79
RAB40CQ96S21 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RAB40CQ96S21 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20■□□□□ 0.79
RAB40CQ96S21 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
RAB40CQ96S21 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB40CQ96S21 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB40CQ96S21 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RAB40CQ96S21 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40CQ96S21 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40CQ96S21 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB40CQ96S21 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40CQ96S21 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB40CQ96S21 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.98■□□□□ 0.79
RAB40CQ96S21 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB40CQ96S21 WHAMMP2-203ENST00000563942 1603 ntBASIC19.98■□□□□ 0.79
RAB40CQ96S21 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB40CQ96S21 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40CQ96S21 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40CQ96S21 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40CQ96S21 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB40CQ96S21 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB40CQ96S21 CAHM-201ENST00000604200 896 ntBASIC19.97■□□□□ 0.79
RAB40CQ96S21 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RAB40CQ96S21 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40CQ96S21 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40CQ96S21 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB40CQ96S21 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB40CQ96S21 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
RAB40CQ96S21 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40CQ96S21 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB40CQ96S21 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RAB40CQ96S21 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RAB40CQ96S21 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40CQ96S21 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40CQ96S21 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB40CQ96S21 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40CQ96S21 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB40CQ96S21 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms