Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 AC018358.1-201ENST00000631079 1402 ntBASIC23.82■■□□□ 1.4
TRIML2Q8N7C3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIML2Q8N7C3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TRIML2Q8N7C3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.8■■□□□ 1.4
TRIML2Q8N7C3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIML2Q8N7C3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.8■■□□□ 1.4
TRIML2Q8N7C3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRIML2Q8N7C3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRIML2Q8N7C3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TRIML2Q8N7C3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TRIML2Q8N7C3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TRIML2Q8N7C3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRIML2Q8N7C3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIML2Q8N7C3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.78■■□□□ 1.4
TRIML2Q8N7C3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRIML2Q8N7C3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
TRIML2Q8N7C3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TRIML2Q8N7C3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIML2Q8N7C3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIML2Q8N7C3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIML2Q8N7C3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIML2Q8N7C3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.77■■□□□ 1.4
TRIML2Q8N7C3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRIML2Q8N7C3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.77■■□□□ 1.4
TRIML2Q8N7C3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TRIML2Q8N7C3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TRIML2Q8N7C3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRIML2Q8N7C3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
TRIML2Q8N7C3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.75■■□□□ 1.39
TRIML2Q8N7C3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIML2Q8N7C3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRIML2Q8N7C3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TRIML2Q8N7C3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
TRIML2Q8N7C3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.74■■□□□ 1.39
TRIML2Q8N7C3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.74■■□□□ 1.39
TRIML2Q8N7C3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRIML2Q8N7C3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
TRIML2Q8N7C3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.73■■□□□ 1.39
TRIML2Q8N7C3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRIML2Q8N7C3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.73■■□□□ 1.39
TRIML2Q8N7C3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIML2Q8N7C3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRIML2Q8N7C3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIML2Q8N7C3 AC087741.3-201ENST00000624270 1347 ntBASIC23.72■■□□□ 1.39
TRIML2Q8N7C3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIML2Q8N7C3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRIML2Q8N7C3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.72■■□□□ 1.39
TRIML2Q8N7C3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
TRIML2Q8N7C3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIML2Q8N7C3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
TRIML2Q8N7C3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRIML2Q8N7C3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.71■■□□□ 1.39
TRIML2Q8N7C3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRIML2Q8N7C3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRIML2Q8N7C3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.7■■□□□ 1.39
TRIML2Q8N7C3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRIML2Q8N7C3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
TRIML2Q8N7C3 AC044849.2-201ENST00000606596 710 ntBASIC23.7■■□□□ 1.38
TRIML2Q8N7C3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIML2Q8N7C3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIML2Q8N7C3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRIML2Q8N7C3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRIML2Q8N7C3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIML2Q8N7C3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TRIML2Q8N7C3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIML2Q8N7C3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIML2Q8N7C3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIML2Q8N7C3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIML2Q8N7C3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIML2Q8N7C3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.67■■□□□ 1.38
TRIML2Q8N7C3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIML2Q8N7C3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TRIML2Q8N7C3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIML2Q8N7C3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRIML2Q8N7C3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIML2Q8N7C3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIML2Q8N7C3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIML2Q8N7C3 AL162393.1-201ENST00000437852 946 ntBASIC23.65■■□□□ 1.38
TRIML2Q8N7C3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIML2Q8N7C3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRIML2Q8N7C3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.38
TRIML2Q8N7C3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
TRIML2Q8N7C3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIML2Q8N7C3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIML2Q8N7C3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIML2Q8N7C3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
TRIML2Q8N7C3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TRIML2Q8N7C3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIML2Q8N7C3 AC020928.2-201ENST00000588717 2197 ntBASIC23.62■■□□□ 1.37
TRIML2Q8N7C3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML2Q8N7C3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TRIML2Q8N7C3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML2Q8N7C3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML2Q8N7C3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML2Q8N7C3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML2Q8N7C3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIML2Q8N7C3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIML2Q8N7C3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIML2Q8N7C3 AC091060.1-201ENST00000623524 1766 ntBASIC23.61■■□□□ 1.37
TRIML2Q8N7C3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms