Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.72■□□□□ 0.43
CSMD3Q7Z407 AL135925.1-201ENST00000605920 1701 ntBASIC17.72■□□□□ 0.43
CSMD3Q7Z407 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD3Q7Z407 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD3Q7Z407 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CSMD3Q7Z407 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.71■□□□□ 0.43
CSMD3Q7Z407 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CSMD3Q7Z407 AC126177.7-201ENST00000547904 679 ntBASIC17.71■□□□□ 0.43
CSMD3Q7Z407 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSMD3Q7Z407 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.71■□□□□ 0.43
CSMD3Q7Z407 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CSMD3Q7Z407 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD3Q7Z407 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD3Q7Z407 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD3Q7Z407 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD3Q7Z407 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.7■□□□□ 0.42
CSMD3Q7Z407 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CSMD3Q7Z407 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CSMD3Q7Z407 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSMD3Q7Z407 AC103724.3-201ENST00000564481 992 ntBASIC17.69■□□□□ 0.42
CSMD3Q7Z407 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CSMD3Q7Z407 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CSMD3Q7Z407 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSMD3Q7Z407 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSMD3Q7Z407 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD3Q7Z407 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD3Q7Z407 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CSMD3Q7Z407 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.68■□□□□ 0.42
CSMD3Q7Z407 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSMD3Q7Z407 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.68■□□□□ 0.42
CSMD3Q7Z407 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CSMD3Q7Z407 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.68■□□□□ 0.42
CSMD3Q7Z407 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.68■□□□□ 0.42
CSMD3Q7Z407 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD3Q7Z407 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD3Q7Z407 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CSMD3Q7Z407 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.67■□□□□ 0.42
CSMD3Q7Z407 SMPD5-203ENST00000639008 1464 ntBASIC17.67■□□□□ 0.42
CSMD3Q7Z407 MIR4508-201ENST00000584178 70 ntBASIC17.67■□□□□ 0.42
CSMD3Q7Z407 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD3Q7Z407 AC100797.4-201ENST00000631653 1827 ntBASIC17.66■□□□□ 0.42
CSMD3Q7Z407 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.66■□□□□ 0.42
CSMD3Q7Z407 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CSMD3Q7Z407 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CSMD3Q7Z407 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.66■□□□□ 0.42
CSMD3Q7Z407 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CSMD3Q7Z407 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.65■□□□□ 0.42
CSMD3Q7Z407 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD3Q7Z407 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.65■□□□□ 0.42
CSMD3Q7Z407 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD3Q7Z407 PVT1_1.1-201ENST00000615125 194 ntBASIC17.65■□□□□ 0.42
CSMD3Q7Z407 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD3Q7Z407 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CSMD3Q7Z407 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.65■□□□□ 0.42
CSMD3Q7Z407 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.64■□□□□ 0.42
CSMD3Q7Z407 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.64■□□□□ 0.42
CSMD3Q7Z407 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CSMD3Q7Z407 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CSMD3Q7Z407 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.64■□□□□ 0.41
CSMD3Q7Z407 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CSMD3Q7Z407 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.64■□□□□ 0.41
CSMD3Q7Z407 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSMD3Q7Z407 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CSMD3Q7Z407 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC17.63■□□□□ 0.41
CSMD3Q7Z407 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CSMD3Q7Z407 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CSMD3Q7Z407 AL356441.2-201ENST00000443009 864 ntBASIC17.63■□□□□ 0.41
CSMD3Q7Z407 MIR6765-201ENST00000614092 87 ntBASIC17.63■□□□□ 0.41
CSMD3Q7Z407 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.62■□□□□ 0.41
CSMD3Q7Z407 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD3Q7Z407 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD3Q7Z407 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.62■□□□□ 0.41
CSMD3Q7Z407 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CSMD3Q7Z407 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD3Q7Z407 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.6■□□□□ 0.41
CSMD3Q7Z407 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.59■□□□□ 0.41
CSMD3Q7Z407 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CSMD3Q7Z407 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD3Q7Z407 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
CSMD3Q7Z407 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD3Q7Z407 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.59■□□□□ 0.41
CSMD3Q7Z407 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSMD3Q7Z407 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD3Q7Z407 AC139795.1-202ENST00000500444 432 ntBASIC17.59■□□□□ 0.41
CSMD3Q7Z407 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.59■□□□□ 0.41
CSMD3Q7Z407 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD3Q7Z407 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.58■□□□□ 0.41
CSMD3Q7Z407 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.58■□□□□ 0.41
CSMD3Q7Z407 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
CSMD3Q7Z407 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSMD3Q7Z407 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms