Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM53Q6P2H8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.48■■□□□ 1.19
TMEM53Q6P2H8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
TMEM53Q6P2H8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM53Q6P2H8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
TMEM53Q6P2H8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
TMEM53Q6P2H8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEM53Q6P2H8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM53Q6P2H8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TMEM53Q6P2H8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.47■■□□□ 1.19
TMEM53Q6P2H8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
TMEM53Q6P2H8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22.47■■□□□ 1.19
TMEM53Q6P2H8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM53Q6P2H8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
TMEM53Q6P2H8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM53Q6P2H8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.46■■□□□ 1.19
TMEM53Q6P2H8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM53Q6P2H8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
TMEM53Q6P2H8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.46■■□□□ 1.19
TMEM53Q6P2H8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.46■■□□□ 1.19
TMEM53Q6P2H8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TMEM53Q6P2H8 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
TMEM53Q6P2H8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
TMEM53Q6P2H8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TMEM53Q6P2H8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM53Q6P2H8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM53Q6P2H8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM53Q6P2H8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.44■■□□□ 1.18
TMEM53Q6P2H8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.44■■□□□ 1.18
TMEM53Q6P2H8 AC135983.2-203ENST00000454486 1613 ntBASIC22.44■■□□□ 1.18
TMEM53Q6P2H8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.44■■□□□ 1.18
TMEM53Q6P2H8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TMEM53Q6P2H8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
TMEM53Q6P2H8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEM53Q6P2H8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEM53Q6P2H8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM53Q6P2H8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM53Q6P2H8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM53Q6P2H8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM53Q6P2H8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM53Q6P2H8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM53Q6P2H8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM53Q6P2H8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
TMEM53Q6P2H8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM53Q6P2H8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM53Q6P2H8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM53Q6P2H8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM53Q6P2H8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
TMEM53Q6P2H8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TMEM53Q6P2H8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM53Q6P2H8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM53Q6P2H8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.41■■□□□ 1.18
TMEM53Q6P2H8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.41■■□□□ 1.18
TMEM53Q6P2H8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM53Q6P2H8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
TMEM53Q6P2H8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.4■■□□□ 1.18
TMEM53Q6P2H8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM53Q6P2H8 WHAMMP2-203ENST00000563942 1603 ntBASIC22.4■■□□□ 1.18
TMEM53Q6P2H8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM53Q6P2H8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM53Q6P2H8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.4■■□□□ 1.18
TMEM53Q6P2H8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM53Q6P2H8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.4■■□□□ 1.18
TMEM53Q6P2H8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
TMEM53Q6P2H8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEM53Q6P2H8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEM53Q6P2H8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.39■■□□□ 1.17
TMEM53Q6P2H8 ABHD17AP4-201ENST00000411545 909 ntBASIC22.38■■□□□ 1.17
TMEM53Q6P2H8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM53Q6P2H8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM53Q6P2H8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.38■■□□□ 1.17
TMEM53Q6P2H8 CLDN5-201ENST00000403084 2357 ntBASIC22.37■■□□□ 1.17
TMEM53Q6P2H8 LINC00543-201ENST00000567234 1845 ntBASIC22.37■■□□□ 1.17
TMEM53Q6P2H8 ZNRF2P2-203ENST00000454624 420 ntBASIC22.37■■□□□ 1.17
TMEM53Q6P2H8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM53Q6P2H8 AC133561.1-201ENST00000568600 2415 ntBASIC22.37■■□□□ 1.17
TMEM53Q6P2H8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM53Q6P2H8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.37■■□□□ 1.17
TMEM53Q6P2H8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.36■■□□□ 1.17
TMEM53Q6P2H8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM53Q6P2H8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM53Q6P2H8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM53Q6P2H8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM53Q6P2H8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.36■■□□□ 1.17
TMEM53Q6P2H8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM53Q6P2H8 LINC01971-201ENST00000617888 1048 ntBASIC22.35■■□□□ 1.17
TMEM53Q6P2H8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM53Q6P2H8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.34■■□□□ 1.17
TMEM53Q6P2H8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.34■■□□□ 1.17
TMEM53Q6P2H8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.34■■□□□ 1.17
TMEM53Q6P2H8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM53Q6P2H8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.34■■□□□ 1.17
TMEM53Q6P2H8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM53Q6P2H8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.34■■□□□ 1.17
TMEM53Q6P2H8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
TMEM53Q6P2H8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.33■■□□□ 1.17
TMEM53Q6P2H8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM53Q6P2H8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.32■■□□□ 1.16
TMEM53Q6P2H8 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEM53Q6P2H8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms