Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.23■□□□□ 0.83
SSSCA1O60232 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSSCA1O60232 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSSCA1O60232 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.22■□□□□ 0.83
SSSCA1O60232 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SSSCA1O60232 AC092803.2-201ENST00000564287 1899 ntBASIC20.22■□□□□ 0.83
SSSCA1O60232 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.22■□□□□ 0.83
SSSCA1O60232 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.22■□□□□ 0.83
SSSCA1O60232 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSSCA1O60232 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.22■□□□□ 0.83
SSSCA1O60232 DUSP8P4-201ENST00000399538 1761 ntBASIC20.21■□□□□ 0.83
SSSCA1O60232 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSSCA1O60232 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SSSCA1O60232 AC093323.1-202ENST00000635031 2045 ntBASIC20.2■□□□□ 0.83
SSSCA1O60232 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSSCA1O60232 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSSCA1O60232 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.19■□□□□ 0.82
SSSCA1O60232 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSSCA1O60232 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.19■□□□□ 0.82
SSSCA1O60232 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSSCA1O60232 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SSSCA1O60232 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.18■□□□□ 0.82
SSSCA1O60232 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSSCA1O60232 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.18■□□□□ 0.82
SSSCA1O60232 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSSCA1O60232 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSSCA1O60232 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SSSCA1O60232 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSSCA1O60232 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSSCA1O60232 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSSCA1O60232 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSSCA1O60232 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.17■□□□□ 0.82
SSSCA1O60232 SETD8P1-201ENST00000623146 1180 ntBASIC20.17■□□□□ 0.82
SSSCA1O60232 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.17■□□□□ 0.82
SSSCA1O60232 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSSCA1O60232 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSSCA1O60232 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSSCA1O60232 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SSSCA1O60232 RARRES2P7-201ENST00000567349 469 ntBASIC20.16■□□□□ 0.82
SSSCA1O60232 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.16■□□□□ 0.82
SSSCA1O60232 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SSSCA1O60232 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SSSCA1O60232 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.15■□□□□ 0.82
SSSCA1O60232 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSSCA1O60232 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSSCA1O60232 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
SSSCA1O60232 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSSCA1O60232 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
SSSCA1O60232 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSSCA1O60232 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSSCA1O60232 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSSCA1O60232 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSSCA1O60232 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSSCA1O60232 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSSCA1O60232 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSSCA1O60232 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SSSCA1O60232 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSSCA1O60232 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSSCA1O60232 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSSCA1O60232 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.12■□□□□ 0.81
SSSCA1O60232 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SSSCA1O60232 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSSCA1O60232 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSSCA1O60232 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SSSCA1O60232 AP004609.3-201ENST00000610705 1884 ntBASIC20.11■□□□□ 0.81
SSSCA1O60232 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SSSCA1O60232 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SSSCA1O60232 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SSSCA1O60232 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.1■□□□□ 0.81
SSSCA1O60232 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SSSCA1O60232 AC135983.2-203ENST00000454486 1613 ntBASIC20.1■□□□□ 0.81
SSSCA1O60232 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.1■□□□□ 0.81
SSSCA1O60232 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SSSCA1O60232 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SSSCA1O60232 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SSSCA1O60232 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSSCA1O60232 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSSCA1O60232 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SSSCA1O60232 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSSCA1O60232 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSSCA1O60232 AL391121.1-201ENST00000607967 1349 ntBASIC20.08■□□□□ 0.81
SSSCA1O60232 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSSCA1O60232 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SSSCA1O60232 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.08■□□□□ 0.81
SSSCA1O60232 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSSCA1O60232 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SSSCA1O60232 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSSCA1O60232 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SSSCA1O60232 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SSSCA1O60232 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SSSCA1O60232 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SSSCA1O60232 WHAMMP2-203ENST00000563942 1603 ntBASIC20.06■□□□□ 0.8
SSSCA1O60232 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SSSCA1O60232 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.06■□□□□ 0.8
SSSCA1O60232 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.06■□□□□ 0.8
SSSCA1O60232 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.06■□□□□ 0.8
SSSCA1O60232 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SSSCA1O60232 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SSSCA1O60232 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.05■□□□□ 0.8
SSSCA1O60232 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms