Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFA1O15239 DUSP8P4-201ENST00000399538 1761 ntBASIC16.93■□□□□ 0.3
NDUFA1O15239 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.93■□□□□ 0.3
NDUFA1O15239 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFA1O15239 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
NDUFA1O15239 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NDUFA1O15239 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA1O15239 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA1O15239 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
NDUFA1O15239 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA1O15239 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA1O15239 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA1O15239 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA1O15239 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA1O15239 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA1O15239 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NDUFA1O15239 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
NDUFA1O15239 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
NDUFA1O15239 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.91■□□□□ 0.3
NDUFA1O15239 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA1O15239 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.91■□□□□ 0.3
NDUFA1O15239 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA1O15239 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
NDUFA1O15239 MIR762-201ENST00000390236 83 ntBASIC16.9■□□□□ 0.3
NDUFA1O15239 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
NDUFA1O15239 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA1O15239 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA1O15239 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NDUFA1O15239 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NDUFA1O15239 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFA1O15239 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFA1O15239 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFA1O15239 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NDUFA1O15239 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NDUFA1O15239 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.89■□□□□ 0.29
NDUFA1O15239 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.89■□□□□ 0.29
NDUFA1O15239 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NDUFA1O15239 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA1O15239 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NDUFA1O15239 AC018358.1-201ENST00000631079 1402 ntBASIC16.87■□□□□ 0.29
NDUFA1O15239 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFA1O15239 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFA1O15239 AC092803.2-201ENST00000564287 1899 ntBASIC16.87■□□□□ 0.29
NDUFA1O15239 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.87■□□□□ 0.29
NDUFA1O15239 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFA1O15239 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NDUFA1O15239 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDUFA1O15239 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDUFA1O15239 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NDUFA1O15239 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NDUFA1O15239 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NDUFA1O15239 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA1O15239 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.85■□□□□ 0.29
NDUFA1O15239 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NDUFA1O15239 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA1O15239 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.85■□□□□ 0.29
NDUFA1O15239 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA1O15239 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NDUFA1O15239 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA1O15239 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA1O15239 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.84■□□□□ 0.29
NDUFA1O15239 AC005559.1-201ENST00000589661 871 ntBASIC16.84■□□□□ 0.29
NDUFA1O15239 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA1O15239 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA1O15239 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.84■□□□□ 0.29
NDUFA1O15239 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.84■□□□□ 0.29
NDUFA1O15239 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NDUFA1O15239 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NDUFA1O15239 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC16.83■□□□□ 0.28
NDUFA1O15239 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA1O15239 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA1O15239 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC16.83■□□□□ 0.28
NDUFA1O15239 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA1O15239 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA1O15239 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA1O15239 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NDUFA1O15239 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA1O15239 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.82■□□□□ 0.28
NDUFA1O15239 HNRNPLP2-201ENST00000568980 1570 ntBASIC16.82■□□□□ 0.28
NDUFA1O15239 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NDUFA1O15239 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NDUFA1O15239 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.82■□□□□ 0.28
NDUFA1O15239 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.82■□□□□ 0.28
NDUFA1O15239 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA1O15239 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NDUFA1O15239 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA1O15239 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NDUFA1O15239 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NDUFA1O15239 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFA1O15239 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NDUFA1O15239 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC16.81■□□□□ 0.28
NDUFA1O15239 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFA1O15239 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFA1O15239 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NDUFA1O15239 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.8■□□□□ 0.28
NDUFA1O15239 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.8■□□□□ 0.28
NDUFA1O15239 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NDUFA1O15239 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFA1O15239 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NDUFA1O15239 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms