Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LINC00854A0A1B0GVQ3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00854A0A1B0GVQ3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00854A0A1B0GVQ3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LINC00854A0A1B0GVQ3 AP004833.2-201ENST00000532228 1454 ntBASIC21.77■■□□□ 1.08
LINC00854A0A1B0GVQ3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.77■■□□□ 1.08
LINC00854A0A1B0GVQ3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
LINC00854A0A1B0GVQ3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00854A0A1B0GVQ3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LINC00854A0A1B0GVQ3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
LINC00854A0A1B0GVQ3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.77■■□□□ 1.07
LINC00854A0A1B0GVQ3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.76■■□□□ 1.07
LINC00854A0A1B0GVQ3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00854A0A1B0GVQ3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00854A0A1B0GVQ3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
LINC00854A0A1B0GVQ3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.76■■□□□ 1.07
LINC00854A0A1B0GVQ3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LINC00854A0A1B0GVQ3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00854A0A1B0GVQ3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LINC00854A0A1B0GVQ3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LINC00854A0A1B0GVQ3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
LINC00854A0A1B0GVQ3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LINC00854A0A1B0GVQ3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
LINC00854A0A1B0GVQ3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00854A0A1B0GVQ3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LINC00854A0A1B0GVQ3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LINC00854A0A1B0GVQ3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.74■■□□□ 1.07
LINC00854A0A1B0GVQ3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
LINC00854A0A1B0GVQ3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00854A0A1B0GVQ3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00854A0A1B0GVQ3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00854A0A1B0GVQ3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LINC00854A0A1B0GVQ3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 AC133561.1-201ENST00000568600 2415 ntBASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.72■■□□□ 1.07
LINC00854A0A1B0GVQ3 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LINC00854A0A1B0GVQ3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
LINC00854A0A1B0GVQ3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00854A0A1B0GVQ3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00854A0A1B0GVQ3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00854A0A1B0GVQ3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00854A0A1B0GVQ3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00854A0A1B0GVQ3 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.7■■□□□ 1.06
LINC00854A0A1B0GVQ3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LINC00854A0A1B0GVQ3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LINC00854A0A1B0GVQ3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.7■■□□□ 1.06
LINC00854A0A1B0GVQ3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
LINC00854A0A1B0GVQ3 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
LINC00854A0A1B0GVQ3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00854A0A1B0GVQ3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00854A0A1B0GVQ3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.69■■□□□ 1.06
LINC00854A0A1B0GVQ3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00854A0A1B0GVQ3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00854A0A1B0GVQ3 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LINC00854A0A1B0GVQ3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.69■■□□□ 1.06
LINC00854A0A1B0GVQ3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00854A0A1B0GVQ3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.68■■□□□ 1.06
LINC00854A0A1B0GVQ3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00854A0A1B0GVQ3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LINC00854A0A1B0GVQ3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00854A0A1B0GVQ3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00854A0A1B0GVQ3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00854A0A1B0GVQ3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00854A0A1B0GVQ3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.67■■□□□ 1.06
LINC00854A0A1B0GVQ3 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC21.67■■□□□ 1.06
LINC00854A0A1B0GVQ3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00854A0A1B0GVQ3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
LINC00854A0A1B0GVQ3 DUSP8P4-201ENST00000399538 1761 ntBASIC21.66■■□□□ 1.06
LINC00854A0A1B0GVQ3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00854A0A1B0GVQ3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00854A0A1B0GVQ3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.66■■□□□ 1.06
LINC00854A0A1B0GVQ3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
LINC00854A0A1B0GVQ3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00854A0A1B0GVQ3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00854A0A1B0GVQ3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
LINC00854A0A1B0GVQ3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00854A0A1B0GVQ3 AC092803.2-201ENST00000564287 1899 ntBASIC21.65■■□□□ 1.06
LINC00854A0A1B0GVQ3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LINC00854A0A1B0GVQ3 AC100797.4-201ENST00000631653 1827 ntBASIC21.65■■□□□ 1.06
LINC00854A0A1B0GVQ3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
LINC00854A0A1B0GVQ3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.64■■□□□ 1.06
LINC00854A0A1B0GVQ3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LINC00854A0A1B0GVQ3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00854A0A1B0GVQ3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00854A0A1B0GVQ3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00854A0A1B0GVQ3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
LINC00854A0A1B0GVQ3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
LINC00854A0A1B0GVQ3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00854A0A1B0GVQ3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LINC00854A0A1B0GVQ3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms