Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
KRT78Q8N1N4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT78Q8N1N4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
KRT78Q8N1N4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
KRT78Q8N1N4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT78Q8N1N4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT78Q8N1N4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
KRT78Q8N1N4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.83■□□□□ 0.45
KRT78Q8N1N4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
KRT78Q8N1N4 HOXB1-202ENST00000577092 1414 ntBASIC17.83■□□□□ 0.45
KRT78Q8N1N4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.83■□□□□ 0.45
KRT78Q8N1N4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 KRT18P23-201ENST00000435622 1283 ntBASIC17.83■□□□□ 0.44
KRT78Q8N1N4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
KRT78Q8N1N4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 AC145285.6-201ENST00000604632 637 ntBASIC17.82■□□□□ 0.44
KRT78Q8N1N4 FAM87A-204ENST00000613235 858 ntBASIC17.82■□□□□ 0.44
KRT78Q8N1N4 AC073912.3-201ENST00000624414 853 ntBASIC17.82■□□□□ 0.44
KRT78Q8N1N4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
KRT78Q8N1N4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KRT78Q8N1N4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms