RNA–Protein interactions for RNA: ENST00000413453.6

CKMT1A-202, Transcript of creatine kinase, mitochondrial 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKMT1A, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKMT1A-202ENST00000413453 NISCHQ9Y2I1 1504 aa45.09■■■■■ 4.81
CKMT1A-202ENST00000413453 CCDC180Q9P1Z9 1646 aa39.92■■■■□ 3.98
CKMT1A-202ENST00000413453 ABCC9O60706 1549 aa38.75■■■■□ 3.79
CKMT1A-202ENST00000413453 ZCCHC6Q5VYS8 1495 aaKnown RBP37.67■■■■□ 3.62
CKMT1A-202ENST00000413453 DCAF8L2P0C7V8 631 aa37.44■■■■□ 3.58
CKMT1A-202ENST00000413453 NACADO15069 1562 aa37.4■■■■□ 3.58
CKMT1A-202ENST00000413453 RB1CC1Q8TDY2 1594 aa37.37■■■■□ 3.57
CKMT1A-202ENST00000413453 MYO15BQ96JP2 1530 aa37.29■■■■□ 3.56
CKMT1A-202ENST00000413453 DCAF1Q9Y4B6 1507 aa37.28■■■■□ 3.56
CKMT1A-202ENST00000413453 UNC13AQ9UPW8 1703 aa36.65■■■■□ 3.46
CKMT1A-202ENST00000413453 SCRIBQ14160 1630 aa36.52■■■■□ 3.44
CKMT1A-202ENST00000413453 BICRAQ9NZM4 1560 aa36.33■■■■□ 3.41
CKMT1A-202ENST00000413453 PABPN1Q86U42 306 aaKnown RBP eCLIP36.25■■■■□ 3.39
CKMT1A-202ENST00000413453 SHROOM4Q9ULL8 1493 aa35.88■■■■□ 3.33
CKMT1A-202ENST00000413453 EIF4G1Q04637 1599 aaKnown RBP35.3■■■■□ 3.24
CKMT1A-202ENST00000413453 DNAJC5BQ9UF47 199 aa35.26■■■■□ 3.24
CKMT1A-202ENST00000413453 CECR2Q9BXF3 1484 aa35.15■■■■□ 3.22
CKMT1A-202ENST00000413453 CC2D2AQ9P2K1 1620 aa35.07■■■■□ 3.2
CKMT1A-202ENST00000413453 SMARCA4P51532 1647 aa34.94■■■■□ 3.18
CKMT1A-202ENST00000413453 BAZ1AQ9NRL2 1556 aaPredicted RBP34.89■■■■□ 3.18
CKMT1A-202ENST00000413453 MROH2BQ7Z745 1585 aa34.81■■■■□ 3.16
CKMT1A-202ENST00000413453 ATAD2BQ9ULI0 1458 aa34.63■■■■□ 3.13
CKMT1A-202ENST00000413453 PEG3Q9GZU2 1588 aa34.57■■■■□ 3.13
CKMT1A-202ENST00000413453 SMARCA2P51531 1590 aa34.56■■■■□ 3.12
CKMT1A-202ENST00000413453 NCAPD3P42695 1498 aa34.52■■■■□ 3.12
CKMT1A-202ENST00000413453 RSF1Q96T23 1441 aaPredicted RBP34.51■■■■□ 3.11
CKMT1A-202ENST00000413453 WIZO95785 1651 aa34.46■■■■□ 3.11
CKMT1A-202ENST00000413453 HMGXB3Q12766 1538 aa34.41■■■■□ 3.1
CKMT1A-202ENST00000413453 BAZ1BQ9UIG0 1483 aaKnown RBP34.35■■■■□ 3.09
CKMT1A-202ENST00000413453 TOP2AP11388 1531 aaKnown RBP34.07■■■■□ 3.05
CKMT1A-202ENST00000413453 SUPT5HO00267 1087 aaKnown RBP33.86■■■■□ 3.01
CKMT1A-202ENST00000413453 NESP48681 1621 aa33.68■■■□□ 2.98
CKMT1A-202ENST00000413453 CCDC88BA6NC98 1476 aa33.67■■■□□ 2.98
CKMT1A-202ENST00000413453 LAMC3Q9Y6N6 1575 aa33.55■■■□□ 2.96
CKMT1A-202ENST00000413453 CADPSQ9ULU8 1353 aa33.52■■■□□ 2.96
CKMT1A-202ENST00000413453 CFTRP13569 1480 aa33.44■■■□□ 2.94
CKMT1A-202ENST00000413453 ERCC6Q03468 1493 aa33.3■■■□□ 2.92
CKMT1A-202ENST00000413453 KIF21AQ7Z4S6 1674 aa33.3■■■□□ 2.92
CKMT1A-202ENST00000413453 PDS5BQ9NTI5 1447 aa33.26■■■□□ 2.92
CKMT1A-202ENST00000413453 PRDM2Q13029 1718 aa33.25■■■□□ 2.91
CKMT1A-202ENST00000413453 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
CKMT1A-202ENST00000413453 THOC2Q8NI27 1593 aaKnown RBP33.09■■■□□ 2.89
CKMT1A-202ENST00000413453 CEP164Q9UPV0 1460 aa33.09■■■□□ 2.89
CKMT1A-202ENST00000413453 MRC2Q9UBG0 1479 aa32.97■■■□□ 2.87
CKMT1A-202ENST00000413453 WDR62O43379 1518 aa32.88■■■□□ 2.85
CKMT1A-202ENST00000413453 URB2Q14146 1524 aaKnown RBP32.87■■■□□ 2.85
CKMT1A-202ENST00000413453 CUX2O14529 1486 aa32.81■■■□□ 2.84
CKMT1A-202ENST00000413453 TOPBP1Q92547 1522 aa32.71■■■□□ 2.83
CKMT1A-202ENST00000413453 DNMBPQ6XZF7 1577 aa32.69■■■□□ 2.82
CKMT1A-202ENST00000413453 CUX1P39880 1505 aa32.63■■■□□ 2.81
CKMT1A-202ENST00000413453 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
CKMT1A-202ENST00000413453 WRNQ14191 1432 aaPredicted RBP eCLIP32.49■■■□□ 2.79
CKMT1A-202ENST00000413453 SYNJ1O43426 1573 aa32.48■■■□□ 2.79
CKMT1A-202ENST00000413453 POLA1P09884 1462 aaPredicted RBP32.46■■■□□ 2.79
CKMT1A-202ENST00000413453 FGD5Q6ZNL6 1462 aa32.43■■■□□ 2.78
CKMT1A-202ENST00000413453 BIVM-ERCC5R4GMW8 1640 aa32.42■■■□□ 2.78
CKMT1A-202ENST00000413453 TOP2BQ02880 1626 aa32.41■■■□□ 2.78
CKMT1A-202ENST00000413453 IFT140Q96RY7 1462 aa32.35■■■□□ 2.77
CKMT1A-202ENST00000413453 TARBP1Q13395 1621 aaKnown RBP32.35■■■□□ 2.77
CKMT1A-202ENST00000413453 RAD54L2Q9Y4B4 1467 aa32.33■■■□□ 2.77
CKMT1A-202ENST00000413453 ZNF608Q9ULD9 1512 aaPredicted RBP32.27■■■□□ 2.76
CKMT1A-202ENST00000413453 SOGA1O94964 1423 aa32.27■■■□□ 2.76
CKMT1A-202ENST00000413453 WDR97A6NE52 1622 aa32.2■■■□□ 2.75
CKMT1A-202ENST00000413453 EIF4G3O43432 1585 aaKnown RBP32.16■■■□□ 2.74
CKMT1A-202ENST00000413453 ABCA10Q8WWZ4 1543 aa32.12■■■□□ 2.73
CKMT1A-202ENST00000413453 AQRO60306 1485 aaKnown RBP eCLIP32.1■■■□□ 2.73
CKMT1A-202ENST00000413453 TDRD9Q8NDG6 1382 aaKnown RBP32.08■■■□□ 2.73
CKMT1A-202ENST00000413453 ABCA5Q8WWZ7 1642 aa32.01■■■□□ 2.71
CKMT1A-202ENST00000413453 GAPVD1Q14C86 1478 aa31.92■■■□□ 2.7
CKMT1A-202ENST00000413453 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
CKMT1A-202ENST00000413453 PBRM1Q86U86 1689 aa31.9■■■□□ 2.7
CKMT1A-202ENST00000413453 GRIN2BQ13224 1484 aa31.86■■■□□ 2.69
CKMT1A-202ENST00000413453 CHIC1Q5VXU3 224 aa31.83■■■□□ 2.69
CKMT1A-202ENST00000413453 SNAPC4Q5SXM2 1469 aa31.82■■■□□ 2.68
CKMT1A-202ENST00000413453 KIF27Q86VH2 1401 aa31.74■■■□□ 2.67
CKMT1A-202ENST00000413453 MAGI1Q96QZ7 1491 aaPredicted RBP31.74■■■□□ 2.67
CKMT1A-202ENST00000413453 ERICH3Q5RHP9 1530 aa31.72■■■□□ 2.67
CKMT1A-202ENST00000413453 RUSC2Q8N2Y8 1516 aa31.7■■■□□ 2.66
CKMT1A-202ENST00000413453 CHD1O14646 1710 aa31.69■■■□□ 2.66
CKMT1A-202ENST00000413453 ADAMTS12P58397 1594 aa31.67■■■□□ 2.66
CKMT1A-202ENST00000413453 SYNJ2O15056 1496 aa31.62■■■□□ 2.65
CKMT1A-202ENST00000413453 IGF1RP08069 1367 aa31.61■■■□□ 2.65
CKMT1A-202ENST00000413453 FBLN2P98095 1184 aa31.56■■■□□ 2.64
CKMT1A-202ENST00000413453 FHAD1B1AJZ9 1412 aa31.55■■■□□ 2.64
CKMT1A-202ENST00000413453 CHMP7Q8WUX9 453 aaPredicted RBP31.51■■■□□ 2.63
CKMT1A-202ENST00000413453 CUL7Q14999 1698 aa31.51■■■□□ 2.63
CKMT1A-202ENST00000413453 GRIN2AQ12879 1464 aa31.48■■■□□ 2.63
CKMT1A-202ENST00000413453 OSCARQ8IYS5 282 aa31.46■■■□□ 2.63
CKMT1A-202ENST00000413453 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
CKMT1A-202ENST00000413453 DNAJC5Q9H3Z4 198 aa31.36■■■□□ 2.61
CKMT1A-202ENST00000413453 CEP170Q5SW79 1584 aa31.36■■■□□ 2.61
CKMT1A-202ENST00000413453 EEA1Q15075 1411 aa31.34■■■□□ 2.61
CKMT1A-202ENST00000413453 CLASP1Q7Z460 1538 aa31.34■■■□□ 2.61
CKMT1A-202ENST00000413453 NUP160Q12769 1436 aa31.33■■■□□ 2.61
CKMT1A-202ENST00000413453 FAM9AQ8IZU1 332 aaPredicted RBP31.31■■■□□ 2.6
CKMT1A-202ENST00000413453 PRXQ9BXM0 1461 aa31.29■■■□□ 2.6
CKMT1A-202ENST00000413453 RAPGEF2Q9Y4G8 1499 aa31.27■■■□□ 2.6
CKMT1A-202ENST00000413453 CSRNP3Q8WYN3 585 aa31.26■■■□□ 2.6
CKMT1A-202ENST00000413453 KIF21BO75037 1637 aa31.09■■■□□ 2.57
CKMT1A-202ENST00000413453 SHROOM2Q13796 1616 aa31.08■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms