RNA–Protein interactions for RNA: ENST00000564438.1

AC005606.2-201, humanhuman

TSL 2 BASIC

Gene AC005606.2, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005606.2-201ENST00000564438 NISCHQ9Y2I1 1504 aa45.82■■■■■ 4.93
AC005606.2-201ENST00000564438 CCDC180Q9P1Z9 1646 aa40.73■■■■■ 4.11
AC005606.2-201ENST00000564438 ABCC9O60706 1549 aa39.89■■■■□ 3.98
AC005606.2-201ENST00000564438 RB1CC1Q8TDY2 1594 aa38.36■■■■□ 3.73
AC005606.2-201ENST00000564438 NACADO15069 1562 aa38.31■■■■□ 3.72
AC005606.2-201ENST00000564438 DCAF8L2P0C7V8 631 aa38.25■■■■□ 3.71
AC005606.2-201ENST00000564438 ZCCHC6Q5VYS8 1495 aaKnown RBP38.16■■■■□ 3.7
AC005606.2-201ENST00000564438 MYO15BQ96JP2 1530 aa38.12■■■■□ 3.69
AC005606.2-201ENST00000564438 DCAF1Q9Y4B6 1507 aa37.93■■■■□ 3.66
AC005606.2-201ENST00000564438 UNC13AQ9UPW8 1703 aa37.47■■■■□ 3.59
AC005606.2-201ENST00000564438 PABPN1Q86U42 306 aaKnown RBP eCLIP37.28■■■■□ 3.56
AC005606.2-201ENST00000564438 BICRAQ9NZM4 1560 aa37.23■■■■□ 3.55
AC005606.2-201ENST00000564438 SCRIBQ14160 1630 aa37.15■■■■□ 3.54
AC005606.2-201ENST00000564438 SHROOM4Q9ULL8 1493 aa36.83■■■■□ 3.49
AC005606.2-201ENST00000564438 DNAJC5BQ9UF47 199 aa36.69■■■■□ 3.46
AC005606.2-201ENST00000564438 EIF4G1Q04637 1599 aaKnown RBP36.23■■■■□ 3.39
AC005606.2-201ENST00000564438 CC2D2AQ9P2K1 1620 aa36.08■■■■□ 3.37
AC005606.2-201ENST00000564438 CECR2Q9BXF3 1484 aa35.86■■■■□ 3.33
AC005606.2-201ENST00000564438 SMARCA4P51532 1647 aa35.55■■■■□ 3.28
AC005606.2-201ENST00000564438 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.27
AC005606.2-201ENST00000564438 ATAD2BQ9ULI0 1458 aa35.39■■■■□ 3.26
AC005606.2-201ENST00000564438 NCAPD3P42695 1498 aa35.38■■■■□ 3.25
AC005606.2-201ENST00000564438 SMARCA2P51531 1590 aa35.32■■■■□ 3.24
AC005606.2-201ENST00000564438 MROH2BQ7Z745 1585 aa35.31■■■■□ 3.24
AC005606.2-201ENST00000564438 PEG3Q9GZU2 1588 aa35.23■■■■□ 3.23
AC005606.2-201ENST00000564438 HMGXB3Q12766 1538 aa35.19■■■■□ 3.22
AC005606.2-201ENST00000564438 BAZ1BQ9UIG0 1483 aaKnown RBP35.07■■■■□ 3.2
AC005606.2-201ENST00000564438 RSF1Q96T23 1441 aaPredicted RBP34.91■■■■□ 3.18
AC005606.2-201ENST00000564438 WIZO95785 1651 aa34.91■■■■□ 3.18
AC005606.2-201ENST00000564438 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
AC005606.2-201ENST00000564438 NESP48681 1621 aa34.52■■■■□ 3.12
AC005606.2-201ENST00000564438 LAMC3Q9Y6N6 1575 aa34.43■■■■□ 3.1
AC005606.2-201ENST00000564438 ERCC6Q03468 1493 aa34.37■■■■□ 3.09
AC005606.2-201ENST00000564438 CADPSQ9ULU8 1353 aa34.35■■■■□ 3.09
AC005606.2-201ENST00000564438 PDS5BQ9NTI5 1447 aa34.21■■■■□ 3.07
AC005606.2-201ENST00000564438 CCDC88BA6NC98 1476 aa34.16■■■■□ 3.06
AC005606.2-201ENST00000564438 CFTRP13569 1480 aa34.14■■■■□ 3.06
AC005606.2-201ENST00000564438 KIF21AQ7Z4S6 1674 aa34.08■■■■□ 3.05
AC005606.2-201ENST00000564438 CUX2O14529 1486 aa34.05■■■■□ 3.04
AC005606.2-201ENST00000564438 THOC2Q8NI27 1593 aaKnown RBP34■■■■□ 3.03
AC005606.2-201ENST00000564438 SUPT5HO00267 1087 aaKnown RBP33.95■■■■□ 3.03
AC005606.2-201ENST00000564438 FANCD2Q9BXW9 1451 aa33.94■■■■□ 3.02
AC005606.2-201ENST00000564438 CEP164Q9UPV0 1460 aa33.88■■■■□ 3.01
AC005606.2-201ENST00000564438 MRC2Q9UBG0 1479 aa33.85■■■■□ 3.01
AC005606.2-201ENST00000564438 PRDM2Q13029 1718 aa33.8■■■■□ 3
AC005606.2-201ENST00000564438 WDR62O43379 1518 aa33.75■■■□□ 2.99
AC005606.2-201ENST00000564438 URB2Q14146 1524 aaKnown RBP33.61■■■□□ 2.97
AC005606.2-201ENST00000564438 ABCC8Q09428 1581 aa33.38■■■□□ 2.93
AC005606.2-201ENST00000564438 TOPBP1Q92547 1522 aa33.38■■■□□ 2.93
AC005606.2-201ENST00000564438 DNMBPQ6XZF7 1577 aa33.34■■■□□ 2.93
AC005606.2-201ENST00000564438 IFT140Q96RY7 1462 aa33.18■■■□□ 2.9
AC005606.2-201ENST00000564438 CUX1P39880 1505 aa33.13■■■□□ 2.89
AC005606.2-201ENST00000564438 POLA1P09884 1462 aaPredicted RBP33.1■■■□□ 2.89
AC005606.2-201ENST00000564438 DNAJC5Q9H3Z4 198 aa33.06■■■□□ 2.88
AC005606.2-201ENST00000564438 ZNF608Q9ULD9 1512 aaPredicted RBP33.04■■■□□ 2.88
AC005606.2-201ENST00000564438 TARBP1Q13395 1621 aaKnown RBP33.03■■■□□ 2.88
AC005606.2-201ENST00000564438 FGD5Q6ZNL6 1462 aa33.01■■■□□ 2.88
AC005606.2-201ENST00000564438 SOGA1O94964 1423 aa32.97■■■□□ 2.87
AC005606.2-201ENST00000564438 RAD54L2Q9Y4B4 1467 aa32.96■■■□□ 2.87
AC005606.2-201ENST00000564438 EIF4G3O43432 1585 aaKnown RBP32.9■■■□□ 2.86
AC005606.2-201ENST00000564438 WRNQ14191 1432 aaPredicted RBP eCLIP32.89■■■□□ 2.86
AC005606.2-201ENST00000564438 AQRO60306 1485 aaKnown RBP eCLIP32.86■■■□□ 2.85
AC005606.2-201ENST00000564438 TOP2BQ02880 1626 aa32.83■■■□□ 2.85
AC005606.2-201ENST00000564438 SYNJ1O43426 1573 aa32.82■■■□□ 2.84
AC005606.2-201ENST00000564438 BIVM-ERCC5R4GMW8 1640 aa32.81■■■□□ 2.84
AC005606.2-201ENST00000564438 TDRD9Q8NDG6 1382 aaKnown RBP32.79■■■□□ 2.84
AC005606.2-201ENST00000564438 WDR97A6NE52 1622 aa32.77■■■□□ 2.84
AC005606.2-201ENST00000564438 ABCA10Q8WWZ4 1543 aa32.71■■■□□ 2.83
AC005606.2-201ENST00000564438 OSCARQ8IYS5 282 aa32.63■■■□□ 2.81
AC005606.2-201ENST00000564438 GRIN2BQ13224 1484 aa32.59■■■□□ 2.81
AC005606.2-201ENST00000564438 GAPVD1Q14C86 1478 aa32.59■■■□□ 2.81
AC005606.2-201ENST00000564438 ABCA5Q8WWZ7 1642 aa32.57■■■□□ 2.8
AC005606.2-201ENST00000564438 SNAPC4Q5SXM2 1469 aa32.54■■■□□ 2.8
AC005606.2-201ENST00000564438 MAGI1Q96QZ7 1491 aaPredicted RBP32.5■■■□□ 2.79
AC005606.2-201ENST00000564438 PBRM1Q86U86 1689 aa32.48■■■□□ 2.79
AC005606.2-201ENST00000564438 CHD1O14646 1710 aa32.46■■■□□ 2.79
AC005606.2-201ENST00000564438 FBLN2P98095 1184 aa32.43■■■□□ 2.78
AC005606.2-201ENST00000564438 SYNJ2O15056 1496 aa32.38■■■□□ 2.77
AC005606.2-201ENST00000564438 CHMP7Q8WUX9 453 aaPredicted RBP32.36■■■□□ 2.77
AC005606.2-201ENST00000564438 ERICH3Q5RHP9 1530 aa32.31■■■□□ 2.76
AC005606.2-201ENST00000564438 ADAMTS12P58397 1594 aa32.26■■■□□ 2.75
AC005606.2-201ENST00000564438 FHAD1B1AJZ9 1412 aa32.21■■■□□ 2.75
AC005606.2-201ENST00000564438 KIF27Q86VH2 1401 aa32.21■■■□□ 2.75
AC005606.2-201ENST00000564438 GRIN2AQ12879 1464 aa32.17■■■□□ 2.74
AC005606.2-201ENST00000564438 CLASP1Q7Z460 1538 aa32.16■■■□□ 2.74
AC005606.2-201ENST00000564438 IGF1RP08069 1367 aa32.11■■■□□ 2.73
AC005606.2-201ENST00000564438 RIMBP3CA6NJZ7 1639 aa32.1■■■□□ 2.73
AC005606.2-201ENST00000564438 RIMBP3BA6NNM3 1639 aa32.1■■■□□ 2.73
AC005606.2-201ENST00000564438 RIMBP3Q9UFD9 1639 aa32.1■■■□□ 2.73
AC005606.2-201ENST00000564438 ARHGEF11O15085 1522 aa32.1■■■□□ 2.73
AC005606.2-201ENST00000564438 TRIM41Q8WV44 630 aa32.08■■■□□ 2.73
AC005606.2-201ENST00000564438 NUP160Q12769 1436 aa32.04■■■□□ 2.72
AC005606.2-201ENST00000564438 CEP170Q5SW79 1584 aa32.01■■■□□ 2.71
AC005606.2-201ENST00000564438 CUL7Q14999 1698 aa31.99■■■□□ 2.71
AC005606.2-201ENST00000564438 RUSC2Q8N2Y8 1516 aa31.92■■■□□ 2.7
AC005606.2-201ENST00000564438 CARMIL1Q5VZK9 1371 aa31.9■■■□□ 2.7
AC005606.2-201ENST00000564438 ARAP1Q96P48 1450 aa31.84■■■□□ 2.69
AC005606.2-201ENST00000564438 CYB5RLQ6IPT4 315 aa31.8■■■□□ 2.68
AC005606.2-201ENST00000564438 SHROOM2Q13796 1616 aa31.79■■■□□ 2.68
AC005606.2-201ENST00000564438 KIAA0586Q9BVV6 1533 aa31.72■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms