RNA–Protein interactions for RNA: ENST00000349064.9

ASIC3-202, Transcript of acid sensing ion channel subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ASIC3, Length 1,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC3-202ENST00000349064 NISCHQ9Y2I1 1504 aa40.53■■■■■ 4.08
ASIC3-202ENST00000349064 CCDC180Q9P1Z9 1646 aa35.98■■■■□ 3.35
ASIC3-202ENST00000349064 ABCC9O60706 1549 aa35.34■■■■□ 3.25
ASIC3-202ENST00000349064 DCAF8L2P0C7V8 631 aa33.97■■■■□ 3.03
ASIC3-202ENST00000349064 ZCCHC6Q5VYS8 1495 aaKnown RBP33.96■■■■□ 3.03
ASIC3-202ENST00000349064 RB1CC1Q8TDY2 1594 aa33.93■■■■□ 3.02
ASIC3-202ENST00000349064 NACADO15069 1562 aa33.88■■■■□ 3.01
ASIC3-202ENST00000349064 MYO15BQ96JP2 1530 aa33.66■■■□□ 2.98
ASIC3-202ENST00000349064 DCAF1Q9Y4B6 1507 aa33.51■■■□□ 2.95
ASIC3-202ENST00000349064 SHROOM4Q9ULL8 1493 aa33.46■■■□□ 2.95
ASIC3-202ENST00000349064 UNC13AQ9UPW8 1703 aa33.07■■■□□ 2.88
ASIC3-202ENST00000349064 PABPN1Q86U42 306 aaKnown RBP eCLIP33.05■■■□□ 2.88
ASIC3-202ENST00000349064 SCRIBQ14160 1630 aa32.9■■■□□ 2.86
ASIC3-202ENST00000349064 BICRAQ9NZM4 1560 aa32.89■■■□□ 2.85
ASIC3-202ENST00000349064 SUPT5HO00267 1087 aaKnown RBP32.57■■■□□ 2.8
ASIC3-202ENST00000349064 DNAJC5BQ9UF47 199 aa32.46■■■□□ 2.79
ASIC3-202ENST00000349064 EIF4G1Q04637 1599 aaKnown RBP32.05■■■□□ 2.72
ASIC3-202ENST00000349064 CC2D2AQ9P2K1 1620 aa31.92■■■□□ 2.7
ASIC3-202ENST00000349064 CECR2Q9BXF3 1484 aa31.75■■■□□ 2.67
ASIC3-202ENST00000349064 CHIC1Q5VXU3 224 aa31.65■■■□□ 2.66
ASIC3-202ENST00000349064 RSF1Q96T23 1441 aaPredicted RBP31.52■■■□□ 2.64
ASIC3-202ENST00000349064 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
ASIC3-202ENST00000349064 BAZ1AQ9NRL2 1556 aaPredicted RBP31.42■■■□□ 2.62
ASIC3-202ENST00000349064 ATAD2BQ9ULI0 1458 aa31.31■■■□□ 2.6
ASIC3-202ENST00000349064 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
ASIC3-202ENST00000349064 MROH2BQ7Z745 1585 aa31.27■■■□□ 2.6
ASIC3-202ENST00000349064 SMARCA2P51531 1590 aa31.25■■■□□ 2.59
ASIC3-202ENST00000349064 PEG3Q9GZU2 1588 aa31.11■■■□□ 2.57
ASIC3-202ENST00000349064 HMGXB3Q12766 1538 aa31.11■■■□□ 2.57
ASIC3-202ENST00000349064 BAZ1BQ9UIG0 1483 aaKnown RBP31.06■■■□□ 2.56
ASIC3-202ENST00000349064 WIZO95785 1651 aa31.01■■■□□ 2.55
ASIC3-202ENST00000349064 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
ASIC3-202ENST00000349064 NESP48681 1621 aa30.56■■■□□ 2.48
ASIC3-202ENST00000349064 LOC105371045A0A1W2PR82 267 aa30.5■■■□□ 2.47
ASIC3-202ENST00000349064 TRIM41Q8WV44 630 aa30.5■■■□□ 2.47
ASIC3-202ENST00000349064 ERCC6Q03468 1493 aa30.47■■■□□ 2.47
ASIC3-202ENST00000349064 LAMC3Q9Y6N6 1575 aa30.44■■■□□ 2.46
ASIC3-202ENST00000349064 CCDC88BA6NC98 1476 aa30.4■■■□□ 2.46
ASIC3-202ENST00000349064 CADPSQ9ULU8 1353 aa30.4■■■□□ 2.46
ASIC3-202ENST00000349064 PDS5BQ9NTI5 1447 aa30.29■■■□□ 2.44
ASIC3-202ENST00000349064 CFTRP13569 1480 aa30.2■■■□□ 2.42
ASIC3-202ENST00000349064 KIF21AQ7Z4S6 1674 aa30.13■■■□□ 2.41
ASIC3-202ENST00000349064 CUX2O14529 1486 aa30.12■■■□□ 2.41
ASIC3-202ENST00000349064 THOC2Q8NI27 1593 aaKnown RBP30.06■■■□□ 2.4
ASIC3-202ENST00000349064 FAM9AQ8IZU1 332 aaPredicted RBP30.05■■■□□ 2.4
ASIC3-202ENST00000349064 FANCD2Q9BXW9 1451 aa30.04■■■□□ 2.4
ASIC3-202ENST00000349064 PCGF6Q9BYE7 350 aa30.02■■■□□ 2.4
ASIC3-202ENST00000349064 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
ASIC3-202ENST00000349064 CEP164Q9UPV0 1460 aa30■■■□□ 2.39
ASIC3-202ENST00000349064 MRC2Q9UBG0 1479 aa29.97■■■□□ 2.39
ASIC3-202ENST00000349064 HRCP23327 699 aa29.88■■■□□ 2.37
ASIC3-202ENST00000349064 PRDM2Q13029 1718 aa29.84■■■□□ 2.37
ASIC3-202ENST00000349064 WDR62O43379 1518 aa29.84■■■□□ 2.37
ASIC3-202ENST00000349064 TRIM26Q12899 539 aaPredicted RBP29.76■■■□□ 2.35
ASIC3-202ENST00000349064 URB2Q14146 1524 aaKnown RBP29.73■■■□□ 2.35
ASIC3-202ENST00000349064 EHMT2Q96KQ7 1210 aa29.63■■■□□ 2.33
ASIC3-202ENST00000349064 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
ASIC3-202ENST00000349064 EEA1Q15075 1411 aa29.61■■■□□ 2.33
ASIC3-202ENST00000349064 SOGA1O94964 1423 aa29.58■■■□□ 2.33
ASIC3-202ENST00000349064 SYNJ1O43426 1573 aa29.56■■■□□ 2.32
ASIC3-202ENST00000349064 TOPBP1Q92547 1522 aa29.55■■■□□ 2.32
ASIC3-202ENST00000349064 DNMBPQ6XZF7 1577 aa29.5■■■□□ 2.31
ASIC3-202ENST00000349064 RUSC2Q8N2Y8 1516 aa29.47■■■□□ 2.31
ASIC3-202ENST00000349064 IFT140Q96RY7 1462 aa29.38■■■□□ 2.29
ASIC3-202ENST00000349064 CSRNP3Q8WYN3 585 aa29.38■■■□□ 2.29
ASIC3-202ENST00000349064 TNIKQ9UKE5 1360 aa29.35■■■□□ 2.29
ASIC3-202ENST00000349064 TOP2BQ02880 1626 aa29.32■■■□□ 2.28
ASIC3-202ENST00000349064 CUX1P39880 1505 aa29.31■■■□□ 2.28
ASIC3-202ENST00000349064 BIVM-ERCC5R4GMW8 1640 aa29.31■■■□□ 2.28
ASIC3-202ENST00000349064 POLA1P09884 1462 aaPredicted RBP29.3■■■□□ 2.28
ASIC3-202ENST00000349064 CEP162Q5TB80 1403 aa29.3■■■□□ 2.28
ASIC3-202ENST00000349064 GOLGA3Q08378 1498 aa29.3■■■□□ 2.28
ASIC3-202ENST00000349064 KIF21BO75037 1637 aa29.29■■■□□ 2.28
ASIC3-202ENST00000349064 ZNF608Q9ULD9 1512 aaPredicted RBP29.26■■■□□ 2.27
ASIC3-202ENST00000349064 DNAJC5Q9H3Z4 198 aa29.25■■■□□ 2.27
ASIC3-202ENST00000349064 FGD5Q6ZNL6 1462 aa29.23■■■□□ 2.27
ASIC3-202ENST00000349064 RAD54L2Q9Y4B4 1467 aa29.2■■■□□ 2.26
ASIC3-202ENST00000349064 TARBP1Q13395 1621 aaKnown RBP29.19■■■□□ 2.26
ASIC3-202ENST00000349064 PPARGC1BQ86YN6 1023 aaKnown RBP29.12■■■□□ 2.25
ASIC3-202ENST00000349064 EIF4G3O43432 1585 aaKnown RBP29.1■■■□□ 2.25
ASIC3-202ENST00000349064 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.251e-6■■■■■ 30
ASIC3-202ENST00000349064 UBTFP17480 764 aaKnown RBP29.08■■■□□ 2.25
ASIC3-202ENST00000349064 TDRD9Q8NDG6 1382 aaKnown RBP29.06■■■□□ 2.24
ASIC3-202ENST00000349064 ZEB1P37275 1124 aaPredicted RBP28.97■■■□□ 2.23
ASIC3-202ENST00000349064 WDR97A6NE52 1622 aa28.95■■■□□ 2.22
ASIC3-202ENST00000349064 RAPGEF2Q9Y4G8 1499 aa28.95■■■□□ 2.22
ASIC3-202ENST00000349064 ABCA10Q8WWZ4 1543 aa28.94■■■□□ 2.22
ASIC3-202ENST00000349064 OSCARQ8IYS5 282 aa28.91■■■□□ 2.22
ASIC3-202ENST00000349064 ERICH3Q5RHP9 1530 aa28.89■■■□□ 2.21
ASIC3-202ENST00000349064 CLIP1P30622 1438 aa28.85■■■□□ 2.21
ASIC3-202ENST00000349064 GRIN2BQ13224 1484 aa28.85■■■□□ 2.21
ASIC3-202ENST00000349064 GAPVD1Q14C86 1478 aa28.85■■■□□ 2.21
ASIC3-202ENST00000349064 PRXQ9BXM0 1461 aa28.83■■■□□ 2.21
ASIC3-202ENST00000349064 SNAPC4Q5SXM2 1469 aa28.83■■■□□ 2.21
ASIC3-202ENST00000349064 KIF27Q86VH2 1401 aa28.81■■■□□ 2.2
ASIC3-202ENST00000349064 FBLN2P98095 1184 aa28.8■■■□□ 2.2
ASIC3-202ENST00000349064 ABCA5Q8WWZ7 1642 aa28.79■■■□□ 2.2
ASIC3-202ENST00000349064 MAGI1Q96QZ7 1491 aaPredicted RBP28.76■■■□□ 2.19
ASIC3-202ENST00000349064 VPS8Q8N3P4 1428 aa28.74■■■□□ 2.19
ASIC3-202ENST00000349064 PBRM1Q86U86 1689 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms