RNA–Protein interactions for RNA: ENST00000481752.5

NCK1-207, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCK1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-207ENST00000481752 NISCHQ9Y2I1 1504 aa40.38■■■■■ 4.05
NCK1-207ENST00000481752 CCDC180Q9P1Z9 1646 aa34.81■■■■□ 3.16
NCK1-207ENST00000481752 ZCCHC6Q5VYS8 1495 aaKnown RBP34.07■■■■□ 3.04
NCK1-207ENST00000481752 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
NCK1-207ENST00000481752 DCAF1Q9Y4B6 1507 aa33.36■■■□□ 2.93
NCK1-207ENST00000481752 DCAF8L2P0C7V8 631 aa33.16■■■□□ 2.9
NCK1-207ENST00000481752 MYO15BQ96JP2 1530 aa32.68■■■□□ 2.82
NCK1-207ENST00000481752 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
NCK1-207ENST00000481752 ABCC9O60706 1549 aa32.37■■■□□ 2.77
NCK1-207ENST00000481752 NACADO15069 1562 aa32.28■■■□□ 2.76
NCK1-207ENST00000481752 SCRIBQ14160 1630 aa32.18■■■□□ 2.74
NCK1-207ENST00000481752 RB1CC1Q8TDY2 1594 aa31.83■■■□□ 2.69
NCK1-207ENST00000481752 RSF1Q96T23 1441 aaPredicted RBP31.63■■■□□ 2.65
NCK1-207ENST00000481752 CHIC1Q5VXU3 224 aa31.57■■■□□ 2.64
NCK1-207ENST00000481752 CECR2Q9BXF3 1484 aa31.37■■■□□ 2.61
NCK1-207ENST00000481752 MROH2BQ7Z745 1585 aa31.25■■■□□ 2.59
NCK1-207ENST00000481752 UNC13AQ9UPW8 1703 aa31.25■■■□□ 2.59
NCK1-207ENST00000481752 BAZ1AQ9NRL2 1556 aaPredicted RBP31.09■■■□□ 2.57
NCK1-207ENST00000481752 WIZO95785 1651 aa31.03■■■□□ 2.56
NCK1-207ENST00000481752 BICRAQ9NZM4 1560 aa30.92■■■□□ 2.54
NCK1-207ENST00000481752 SMARCA4P51532 1647 aa30.88■■■□□ 2.53
NCK1-207ENST00000481752 PABPN1Q86U42 306 aaKnown RBP eCLIP30.7■■■□□ 2.51
NCK1-207ENST00000481752 TOP2AP11388 1531 aaKnown RBP30.69■■■□□ 2.5
NCK1-207ENST00000481752 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
NCK1-207ENST00000481752 EIF4G1Q04637 1599 aaKnown RBP30.51■■■□□ 2.47
NCK1-207ENST00000481752 PEG3Q9GZU2 1588 aa30.47■■■□□ 2.47
NCK1-207ENST00000481752 SMARCA2P51531 1590 aa30.45■■■□□ 2.47
NCK1-207ENST00000481752 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
NCK1-207ENST00000481752 LOC105371045A0A1W2PR82 267 aa30.42■■■□□ 2.46
NCK1-207ENST00000481752 ATAD2BQ9ULI0 1458 aa30.21■■■□□ 2.43
NCK1-207ENST00000481752 BAZ1BQ9UIG0 1483 aaKnown RBP30.07■■■□□ 2.4
NCK1-207ENST00000481752 FAM9AQ8IZU1 332 aaPredicted RBP30.05■■■□□ 2.4
NCK1-207ENST00000481752 ABCC8Q09428 1581 aa30.03■■■□□ 2.4
NCK1-207ENST00000481752 NCAPD3P42695 1498 aa29.82■■■□□ 2.36
NCK1-207ENST00000481752 HMGXB3Q12766 1538 aa29.82■■■□□ 2.36
NCK1-207ENST00000481752 PCGF6Q9BYE7 350 aa29.76■■■□□ 2.35
NCK1-207ENST00000481752 WRNQ14191 1432 aaPredicted RBP eCLIP29.73■■■□□ 2.35
NCK1-207ENST00000481752 EEA1Q15075 1411 aa29.65■■■□□ 2.34
NCK1-207ENST00000481752 SOGA1O94964 1423 aa29.63■■■□□ 2.33
NCK1-207ENST00000481752 EHMT2Q96KQ7 1210 aa29.62■■■□□ 2.33
NCK1-207ENST00000481752 SYNJ1O43426 1573 aa29.59■■■□□ 2.33
NCK1-207ENST00000481752 TRIM26Q12899 539 aaPredicted RBP29.55■■■□□ 2.32
NCK1-207ENST00000481752 RUSC2Q8N2Y8 1516 aa29.49■■■□□ 2.31
NCK1-207ENST00000481752 HRCP23327 699 aa29.48■■■□□ 2.31
NCK1-207ENST00000481752 CSRNP3Q8WYN3 585 aa29.46■■■□□ 2.31
NCK1-207ENST00000481752 TOP2BQ02880 1626 aa29.39■■■□□ 2.3
NCK1-207ENST00000481752 CFTRP13569 1480 aa29.36■■■□□ 2.29
NCK1-207ENST00000481752 TNIKQ9UKE5 1360 aa29.36■■■□□ 2.29
NCK1-207ENST00000481752 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
NCK1-207ENST00000481752 GOLGA3Q08378 1498 aa29.29■■■□□ 2.28
NCK1-207ENST00000481752 CC2D2AQ9P2K1 1620 aa29.29■■■□□ 2.28
NCK1-207ENST00000481752 CEP162Q5TB80 1403 aa29.26■■■□□ 2.27
NCK1-207ENST00000481752 KIF21BO75037 1637 aa29.24■■■□□ 2.27
NCK1-207ENST00000481752 CEP164Q9UPV0 1460 aa29.22■■■□□ 2.27
NCK1-207ENST00000481752 PRDM2Q13029 1718 aa29.19■■■□□ 2.26
NCK1-207ENST00000481752 CUX1P39880 1505 aa29.17■■■□□ 2.26
NCK1-207ENST00000481752 UBTFP17480 764 aaKnown RBP29.14■■■□□ 2.26
NCK1-207ENST00000481752 CADPSQ9ULU8 1353 aa29.12■■■□□ 2.25
NCK1-207ENST00000481752 RAPGEF2Q9Y4G8 1499 aa28.98■■■□□ 2.23
NCK1-207ENST00000481752 PPARGC1BQ86YN6 1023 aaKnown RBP28.93■■■□□ 2.22
NCK1-207ENST00000481752 PRXQ9BXM0 1461 aa28.91■■■□□ 2.22
NCK1-207ENST00000481752 ERICH3Q5RHP9 1530 aa28.91■■■□□ 2.22
NCK1-207ENST00000481752 KIF27Q86VH2 1401 aa28.9■■■□□ 2.22
NCK1-207ENST00000481752 CLIP1P30622 1438 aa28.86■■■□□ 2.21
NCK1-207ENST00000481752 FANCD2Q9BXW9 1451 aa28.79■■■□□ 2.2
NCK1-207ENST00000481752 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
NCK1-207ENST00000481752 ZEB1P37275 1124 aaPredicted RBP28.71■■■□□ 2.19
NCK1-207ENST00000481752 VPS8Q8N3P4 1428 aa28.71■■■□□ 2.19
NCK1-207ENST00000481752 CUX2O14529 1486 aa28.68■■■□□ 2.18
NCK1-207ENST00000481752 NESP48681 1621 aa28.66■■■□□ 2.18
NCK1-207ENST00000481752 LAMC3Q9Y6N6 1575 aa28.66■■■□□ 2.18
NCK1-207ENST00000481752 DNMBPQ6XZF7 1577 aa28.65■■■□□ 2.18
NCK1-207ENST00000481752 IGF1RP08069 1367 aa28.6■■■□□ 2.17
NCK1-207ENST00000481752 TOPBP1Q92547 1522 aa28.57■■■□□ 2.16
NCK1-207ENST00000481752 TTBK1Q5TCY1 1321 aaPredicted RBP28.54■■■□□ 2.16
NCK1-207ENST00000481752 ARAP1Q96P48 1450 aa28.5■■■□□ 2.15
NCK1-207ENST00000481752 POLA1P09884 1462 aaPredicted RBP28.49■■■□□ 2.15
NCK1-207ENST00000481752 RANGAP1P46060 587 aaPredicted RBP28.48■■■□□ 2.15
NCK1-207ENST00000481752 ABCA10Q8WWZ4 1543 aa28.48■■■□□ 2.15
NCK1-207ENST00000481752 CARMIL1Q5VZK9 1371 aa28.46■■■□□ 2.15
NCK1-207ENST00000481752 DNAJC5BQ9UF47 199 aa28.43■■■□□ 2.14
NCK1-207ENST00000481752 RAD54L2Q9Y4B4 1467 aa28.43■■■□□ 2.14
NCK1-207ENST00000481752 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
NCK1-207ENST00000481752 URB2Q14146 1524 aaKnown RBP28.42■■■□□ 2.14
NCK1-207ENST00000481752 APLP2Q06481 763 aa28.41■■■□□ 2.14
NCK1-207ENST00000481752 ARHGAP35Q9NRY4 1499 aa28.37■■■□□ 2.13
NCK1-207ENST00000481752 WDR97A6NE52 1622 aa28.31■■■□□ 2.12
NCK1-207ENST00000481752 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.31■■■□□ 2.12
NCK1-207ENST00000481752 KIF21AQ7Z4S6 1674 aa28.28■■■□□ 2.12
NCK1-207ENST00000481752 CCER1Q8TC90 406 aaPredicted RBP28.26■■■□□ 2.11
NCK1-207ENST00000481752 CUL7Q14999 1698 aa28.26■■■□□ 2.11
NCK1-207ENST00000481752 ABCA5Q8WWZ7 1642 aa28.19■■■□□ 2.1
NCK1-207ENST00000481752 KANK4Q5T7N3 995 aaPredicted RBP28.11■■■□□ 2.09
NCK1-207ENST00000481752 GAPVD1Q14C86 1478 aa28.09■■■□□ 2.09
NCK1-207ENST00000481752 TARBP1Q13395 1621 aaKnown RBP28.08■■■□□ 2.09
NCK1-207ENST00000481752 TDRD9Q8NDG6 1382 aaKnown RBP28.08■■■□□ 2.09
NCK1-207ENST00000481752 MAP3K1Q13233 1512 aa28.07■■■□□ 2.08
NCK1-207ENST00000481752 CTTNBP2Q8WZ74 1663 aa28.05■■■□□ 2.08
NCK1-207ENST00000481752 HNRNPUL2Q1KMD3 747 aaKnown RBP28.04■■■□□ 2.08
NCK1-207ENST00000481752 EFCAB5A4FU69 1503 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms