Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 LINC01311-201ENST00000565162 1445 ntBASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNAP47Q5SQN1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 SPDYE15P-201ENST00000424157 909 ntBASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 AC005332.1-201ENST00000577698 1310 ntBASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNAP47Q5SQN1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 STARP1-201ENST00000397973 869 ntBASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNAP47Q5SQN1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.09■□□□□ 0.49
SNAP47Q5SQN1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms