RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 NISCHQ9Y2I1 1504 aa44.78■■■■■ 4.76
COPE-201ENST00000262812 CCDC180Q9P1Z9 1646 aa39.71■■■■□ 3.95
COPE-201ENST00000262812 ABCC9O60706 1549 aa39.32■■■■□ 3.89
COPE-201ENST00000262812 DCAF8L2P0C7V8 631 aa37.84■■■■□ 3.65
COPE-201ENST00000262812 RB1CC1Q8TDY2 1594 aa37.59■■■■□ 3.61
COPE-201ENST00000262812 NACADO15069 1562 aa37.48■■■■□ 3.59
COPE-201ENST00000262812 ZCCHC6Q5VYS8 1495 aaKnown RBP37.21■■■■□ 3.55
COPE-201ENST00000262812 MYO15BQ96JP2 1530 aa37.14■■■■□ 3.54
COPE-201ENST00000262812 DCAF1Q9Y4B6 1507 aa36.93■■■■□ 3.5
COPE-201ENST00000262812 PABPN1Q86U42 306 aaKnown RBP eCLIP36.85■■■■□ 3.491e-10■■■■□ 21.1
COPE-201ENST00000262812 UNC13AQ9UPW8 1703 aa36.62■■■■□ 3.45
COPE-201ENST00000262812 BICRAQ9NZM4 1560 aa36.46■■■■□ 3.43
COPE-201ENST00000262812 SCRIBQ14160 1630 aa36.41■■■■□ 3.42
COPE-201ENST00000262812 DNAJC5BQ9UF47 199 aa36.36■■■■□ 3.41
COPE-201ENST00000262812 SHROOM4Q9ULL8 1493 aa35.95■■■■□ 3.35
COPE-201ENST00000262812 EIF4G1Q04637 1599 aaKnown RBP35.52■■■■□ 3.28
COPE-201ENST00000262812 CC2D2AQ9P2K1 1620 aa35.45■■■■□ 3.27
COPE-201ENST00000262812 CECR2Q9BXF3 1484 aa35.31■■■■□ 3.24
COPE-201ENST00000262812 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
COPE-201ENST00000262812 BAZ1AQ9NRL2 1556 aaPredicted RBP34.68■■■■□ 3.14
COPE-201ENST00000262812 ATAD2BQ9ULI0 1458 aa34.67■■■■□ 3.14
COPE-201ENST00000262812 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
COPE-201ENST00000262812 MROH2BQ7Z745 1585 aa34.55■■■■□ 3.12
COPE-201ENST00000262812 SMARCA2P51531 1590 aa34.54■■■■□ 3.12
COPE-201ENST00000262812 BAZ1BQ9UIG0 1483 aaKnown RBP34.38■■■■□ 3.09
COPE-201ENST00000262812 HMGXB3Q12766 1538 aa34.37■■■■□ 3.09
COPE-201ENST00000262812 PEG3Q9GZU2 1588 aa34.33■■■■□ 3.09
COPE-201ENST00000262812 WIZO95785 1651 aa34.13■■■■□ 3.05
COPE-201ENST00000262812 RSF1Q96T23 1441 aaPredicted RBP34.12■■■■□ 3.05
COPE-201ENST00000262812 NESP48681 1621 aa33.96■■■■□ 3.03
COPE-201ENST00000262812 ERCC6Q03468 1493 aa33.88■■■■□ 3.01
COPE-201ENST00000262812 TOP2AP11388 1531 aaKnown RBP33.72■■■□□ 2.99
COPE-201ENST00000262812 CADPSQ9ULU8 1353 aa33.7■■■□□ 2.98
COPE-201ENST00000262812 LAMC3Q9Y6N6 1575 aa33.69■■■□□ 2.98
COPE-201ENST00000262812 PDS5BQ9NTI5 1447 aa33.6■■■□□ 2.97
COPE-201ENST00000262812 CUX2O14529 1486 aa33.48■■■□□ 2.95
COPE-201ENST00000262812 CCDC88BA6NC98 1476 aa33.44■■■□□ 2.94
COPE-201ENST00000262812 CFTRP13569 1480 aa33.4■■■□□ 2.94
COPE-201ENST00000262812 KIF21AQ7Z4S6 1674 aa33.39■■■□□ 2.94
COPE-201ENST00000262812 SUPT5HO00267 1087 aaKnown RBP33.34■■■□□ 2.93
COPE-201ENST00000262812 THOC2Q8NI27 1593 aaKnown RBP33.31■■■□□ 2.92
COPE-201ENST00000262812 FANCD2Q9BXW9 1451 aa33.29■■■□□ 2.92
COPE-201ENST00000262812 CEP164Q9UPV0 1460 aa33.24■■■□□ 2.91
COPE-201ENST00000262812 MRC2Q9UBG0 1479 aa33.22■■■□□ 2.91
COPE-201ENST00000262812 WDR62O43379 1518 aa33.05■■■□□ 2.88
COPE-201ENST00000262812 URB2Q14146 1524 aaKnown RBP32.96■■■□□ 2.87
COPE-201ENST00000262812 PRDM2Q13029 1718 aa32.9■■■□□ 2.86
COPE-201ENST00000262812 DNAJC5Q9H3Z4 198 aa32.83■■■□□ 2.85
COPE-201ENST00000262812 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
COPE-201ENST00000262812 ABCC8Q09428 1581 aa32.66■■■□□ 2.82
COPE-201ENST00000262812 DNMBPQ6XZF7 1577 aa32.6■■■□□ 2.81
COPE-201ENST00000262812 IFT140Q96RY7 1462 aa32.55■■■□□ 2.8
COPE-201ENST00000262812 ZNF608Q9ULD9 1512 aaPredicted RBP32.48■■■□□ 2.79
COPE-201ENST00000262812 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
COPE-201ENST00000262812 CUX1P39880 1505 aa32.41■■■□□ 2.78
COPE-201ENST00000262812 SOGA1O94964 1423 aa32.38■■■□□ 2.77
COPE-201ENST00000262812 RAD54L2Q9Y4B4 1467 aa32.37■■■□□ 2.77
COPE-201ENST00000262812 FGD5Q6ZNL6 1462 aa32.34■■■□□ 2.77
COPE-201ENST00000262812 AQRO60306 1485 aaKnown RBP eCLIP32.32■■■□□ 2.763e-7■■■■□ 21.7
COPE-201ENST00000262812 TARBP1Q13395 1621 aaKnown RBP32.3■■■□□ 2.76
COPE-201ENST00000262812 TDRD9Q8NDG6 1382 aaKnown RBP32.27■■■□□ 2.76
COPE-201ENST00000262812 OSCARQ8IYS5 282 aa32.25■■■□□ 2.75
COPE-201ENST00000262812 EIF4G3O43432 1585 aaKnown RBP32.22■■■□□ 2.75
COPE-201ENST00000262812 WRNQ14191 1432 aaPredicted RBP eCLIP32.17■■■□□ 2.74
COPE-201ENST00000262812 FBLN2P98095 1184 aa32.1■■■□□ 2.73
COPE-201ENST00000262812 SYNJ1O43426 1573 aa32.04■■■□□ 2.72
COPE-201ENST00000262812 TOP2BQ02880 1626 aa32.01■■■□□ 2.72
COPE-201ENST00000262812 ABCA10Q8WWZ4 1543 aa31.97■■■□□ 2.71
COPE-201ENST00000262812 BIVM-ERCC5R4GMW8 1640 aa31.96■■■□□ 2.71
COPE-201ENST00000262812 GRIN2BQ13224 1484 aa31.95■■■□□ 2.7
COPE-201ENST00000262812 SNAPC4Q5SXM2 1469 aa31.95■■■□□ 2.7
COPE-201ENST00000262812 GAPVD1Q14C86 1478 aa31.94■■■□□ 2.7
COPE-201ENST00000262812 WDR97A6NE52 1622 aa31.93■■■□□ 2.7
COPE-201ENST00000262812 CHMP7Q8WUX9 453 aaPredicted RBP31.92■■■□□ 2.7
COPE-201ENST00000262812 MAGI1Q96QZ7 1491 aaPredicted RBP31.83■■■□□ 2.69
COPE-201ENST00000262812 CHD1O14646 1710 aa31.82■■■□□ 2.68
COPE-201ENST00000262812 TRIM41Q8WV44 630 aa31.8■■■□□ 2.68
COPE-201ENST00000262812 ABCA5Q8WWZ7 1642 aa31.79■■■□□ 2.68
COPE-201ENST00000262812 SYNJ2O15056 1496 aa31.74■■■□□ 2.67
COPE-201ENST00000262812 PBRM1Q86U86 1689 aa31.73■■■□□ 2.67
COPE-201ENST00000262812 RIMBP3CA6NJZ7 1639 aa31.59■■■□□ 2.65
COPE-201ENST00000262812 RIMBP3BA6NNM3 1639 aa31.59■■■□□ 2.65
COPE-201ENST00000262812 RIMBP3Q9UFD9 1639 aa31.59■■■□□ 2.65
COPE-201ENST00000262812 ARHGEF11O15085 1522 aa31.59■■■□□ 2.65
COPE-201ENST00000262812 FHAD1B1AJZ9 1412 aa31.57■■■□□ 2.64
COPE-201ENST00000262812 ERICH3Q5RHP9 1530 aa31.56■■■□□ 2.64
COPE-201ENST00000262812 ADAMTS12P58397 1594 aa31.52■■■□□ 2.64
COPE-201ENST00000262812 GRIN2AQ12879 1464 aa31.52■■■□□ 2.64
COPE-201ENST00000262812 KIF27Q86VH2 1401 aa31.51■■■□□ 2.64
COPE-201ENST00000262812 CYB5RLQ6IPT4 315 aa31.51■■■□□ 2.63
COPE-201ENST00000262812 CLASP1Q7Z460 1538 aa31.5■■■□□ 2.63
COPE-201ENST00000262812 IGF1RP08069 1367 aa31.46■■■□□ 2.63
COPE-201ENST00000262812 NUP160Q12769 1436 aa31.37■■■□□ 2.61
COPE-201ENST00000262812 CEP170Q5SW79 1584 aa31.34■■■□□ 2.61
COPE-201ENST00000262812 ARAP1Q96P48 1450 aa31.33■■■□□ 2.61
COPE-201ENST00000262812 CARMIL1Q5VZK9 1371 aa31.27■■■□□ 2.6
COPE-201ENST00000262812 RUSC2Q8N2Y8 1516 aa31.24■■■□□ 2.59
COPE-201ENST00000262812 JPH4Q96JJ6 628 aa31.21■■■□□ 2.59
COPE-201ENST00000262812 CUL7Q14999 1698 aa31.19■■■□□ 2.58
COPE-201ENST00000262812 ERCC6L2Q5T890 1561 aa31.15■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms