RNA–Protein interactions for RNA: ENST00000381808.7

SDCBP2-203, Transcript of syndecan binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SDCBP2, Length 1,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-203ENST00000381808 NISCHQ9Y2I1 1504 aa45.04■■■■■ 4.8
SDCBP2-203ENST00000381808 CCDC180Q9P1Z9 1646 aa40.1■■■■■ 4.01
SDCBP2-203ENST00000381808 ABCC9O60706 1549 aa39.13■■■■□ 3.85
SDCBP2-203ENST00000381808 RB1CC1Q8TDY2 1594 aa37.67■■■■□ 3.62
SDCBP2-203ENST00000381808 NACADO15069 1562 aa37.6■■■■□ 3.61
SDCBP2-203ENST00000381808 DCAF8L2P0C7V8 631 aa37.57■■■■□ 3.6
SDCBP2-203ENST00000381808 ZCCHC6Q5VYS8 1495 aaKnown RBP37.54■■■■□ 3.6
SDCBP2-203ENST00000381808 MYO15BQ96JP2 1530 aa37.35■■■■□ 3.57
SDCBP2-203ENST00000381808 DCAF1Q9Y4B6 1507 aa37.24■■■■□ 3.55
SDCBP2-203ENST00000381808 UNC13AQ9UPW8 1703 aa36.99■■■■□ 3.51
SDCBP2-203ENST00000381808 SCRIBQ14160 1630 aa36.62■■■■□ 3.45
SDCBP2-203ENST00000381808 BICRAQ9NZM4 1560 aa36.56■■■■□ 3.44
SDCBP2-203ENST00000381808 PABPN1Q86U42 306 aaKnown RBP eCLIP36.53■■■■□ 3.44
SDCBP2-203ENST00000381808 SHROOM4Q9ULL8 1493 aa36.08■■■■□ 3.37
SDCBP2-203ENST00000381808 DNAJC5BQ9UF47 199 aa35.79■■■■□ 3.32
SDCBP2-203ENST00000381808 EIF4G1Q04637 1599 aaKnown RBP35.57■■■■□ 3.28
SDCBP2-203ENST00000381808 CC2D2AQ9P2K1 1620 aa35.43■■■■□ 3.26
SDCBP2-203ENST00000381808 CECR2Q9BXF3 1484 aa35.12■■■■□ 3.21
SDCBP2-203ENST00000381808 SMARCA4P51532 1647 aa34.99■■■■□ 3.19
SDCBP2-203ENST00000381808 BAZ1AQ9NRL2 1556 aaPredicted RBP34.91■■■■□ 3.18
SDCBP2-203ENST00000381808 MROH2BQ7Z745 1585 aa34.74■■■■□ 3.15
SDCBP2-203ENST00000381808 ATAD2BQ9ULI0 1458 aa34.71■■■■□ 3.15
SDCBP2-203ENST00000381808 SMARCA2P51531 1590 aa34.69■■■■□ 3.14
SDCBP2-203ENST00000381808 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
SDCBP2-203ENST00000381808 PEG3Q9GZU2 1588 aa34.6■■■■□ 3.13
SDCBP2-203ENST00000381808 HMGXB3Q12766 1538 aa34.55■■■■□ 3.12
SDCBP2-203ENST00000381808 BAZ1BQ9UIG0 1483 aaKnown RBP34.46■■■■□ 3.11
SDCBP2-203ENST00000381808 WIZO95785 1651 aa34.44■■■■□ 3.1
SDCBP2-203ENST00000381808 RSF1Q96T23 1441 aaPredicted RBP34.31■■■■□ 3.08
SDCBP2-203ENST00000381808 TOP2AP11388 1531 aaKnown RBP34.01■■■■□ 3.04
SDCBP2-203ENST00000381808 NESP48681 1621 aa33.9■■■■□ 3.02
SDCBP2-203ENST00000381808 LAMC3Q9Y6N6 1575 aa33.81■■■■□ 3
SDCBP2-203ENST00000381808 ERCC6Q03468 1493 aa33.7■■■□□ 2.99
SDCBP2-203ENST00000381808 CADPSQ9ULU8 1353 aa33.64■■■□□ 2.98
SDCBP2-203ENST00000381808 KIF21AQ7Z4S6 1674 aa33.6■■■□□ 2.97
SDCBP2-203ENST00000381808 CCDC88BA6NC98 1476 aa33.58■■■□□ 2.97
SDCBP2-203ENST00000381808 PDS5BQ9NTI5 1447 aa33.5■■■□□ 2.95
SDCBP2-203ENST00000381808 SUPT5HO00267 1087 aaKnown RBP33.48■■■□□ 2.95
SDCBP2-203ENST00000381808 CFTRP13569 1480 aa33.47■■■□□ 2.95
SDCBP2-203ENST00000381808 PRDM2Q13029 1718 aa33.44■■■□□ 2.94
SDCBP2-203ENST00000381808 THOC2Q8NI27 1593 aaKnown RBP33.41■■■□□ 2.94
SDCBP2-203ENST00000381808 FANCD2Q9BXW9 1451 aa33.31■■■□□ 2.92
SDCBP2-203ENST00000381808 CUX2O14529 1486 aa33.3■■■□□ 2.92
SDCBP2-203ENST00000381808 CEP164Q9UPV0 1460 aa33.27■■■□□ 2.92
SDCBP2-203ENST00000381808 MRC2Q9UBG0 1479 aa33.21■■■□□ 2.91
SDCBP2-203ENST00000381808 WDR62O43379 1518 aa33.12■■■□□ 2.89
SDCBP2-203ENST00000381808 URB2Q14146 1524 aaKnown RBP33■■■□□ 2.87
SDCBP2-203ENST00000381808 TOPBP1Q92547 1522 aa32.8■■■□□ 2.84
SDCBP2-203ENST00000381808 DNMBPQ6XZF7 1577 aa32.79■■■□□ 2.84
SDCBP2-203ENST00000381808 ABCC8Q09428 1581 aa32.74■■■□□ 2.83
SDCBP2-203ENST00000381808 CUX1P39880 1505 aa32.6■■■□□ 2.81
SDCBP2-203ENST00000381808 IFT140Q96RY7 1462 aa32.54■■■□□ 2.8
SDCBP2-203ENST00000381808 POLA1P09884 1462 aaPredicted RBP32.51■■■□□ 2.79
SDCBP2-203ENST00000381808 TARBP1Q13395 1621 aaKnown RBP32.48■■■□□ 2.79
SDCBP2-203ENST00000381808 FGD5Q6ZNL6 1462 aa32.47■■■□□ 2.79
SDCBP2-203ENST00000381808 ZNF608Q9ULD9 1512 aaPredicted RBP32.44■■■□□ 2.78
SDCBP2-203ENST00000381808 RAD54L2Q9Y4B4 1467 aa32.39■■■□□ 2.78
SDCBP2-203ENST00000381808 BIVM-ERCC5R4GMW8 1640 aa32.38■■■□□ 2.77
SDCBP2-203ENST00000381808 EIF4G3O43432 1585 aaKnown RBP32.37■■■□□ 2.77
SDCBP2-203ENST00000381808 SYNJ1O43426 1573 aa32.36■■■□□ 2.77
SDCBP2-203ENST00000381808 WRNQ14191 1432 aaPredicted RBP eCLIP32.35■■■□□ 2.77
SDCBP2-203ENST00000381808 SOGA1O94964 1423 aa32.34■■■□□ 2.77
SDCBP2-203ENST00000381808 TOP2BQ02880 1626 aa32.34■■■□□ 2.77
SDCBP2-203ENST00000381808 WDR97A6NE52 1622 aa32.29■■■□□ 2.76
SDCBP2-203ENST00000381808 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.75
SDCBP2-203ENST00000381808 DNAJC5Q9H3Z4 198 aa32.19■■■□□ 2.74
SDCBP2-203ENST00000381808 TDRD9Q8NDG6 1382 aaKnown RBP32.17■■■□□ 2.74
SDCBP2-203ENST00000381808 ABCA10Q8WWZ4 1543 aa32.12■■■□□ 2.73
SDCBP2-203ENST00000381808 PBRM1Q86U86 1689 aa32.08■■■□□ 2.73
SDCBP2-203ENST00000381808 ABCA5Q8WWZ7 1642 aa32.07■■■□□ 2.72
SDCBP2-203ENST00000381808 CHD1O14646 1710 aa32.02■■■□□ 2.72
SDCBP2-203ENST00000381808 GAPVD1Q14C86 1478 aa31.99■■■□□ 2.71
SDCBP2-203ENST00000381808 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
SDCBP2-203ENST00000381808 SNAPC4Q5SXM2 1469 aa31.97■■■□□ 2.71
SDCBP2-203ENST00000381808 MAGI1Q96QZ7 1491 aaPredicted RBP31.89■■■□□ 2.7
SDCBP2-203ENST00000381808 OSCARQ8IYS5 282 aa31.87■■■□□ 2.69
SDCBP2-203ENST00000381808 FBLN2P98095 1184 aa31.81■■■□□ 2.68
SDCBP2-203ENST00000381808 SYNJ2O15056 1496 aa31.77■■■□□ 2.68
SDCBP2-203ENST00000381808 ADAMTS12P58397 1594 aa31.76■■■□□ 2.67
SDCBP2-203ENST00000381808 ERICH3Q5RHP9 1530 aa31.75■■■□□ 2.67
SDCBP2-203ENST00000381808 CHMP7Q8WUX9 453 aaPredicted RBP31.7■■■□□ 2.67
SDCBP2-203ENST00000381808 KIF27Q86VH2 1401 aa31.66■■■□□ 2.66
SDCBP2-203ENST00000381808 FHAD1B1AJZ9 1412 aa31.6■■■□□ 2.65
SDCBP2-203ENST00000381808 TRIM41Q8WV44 630 aa31.59■■■□□ 2.65
SDCBP2-203ENST00000381808 GRIN2AQ12879 1464 aa31.59■■■□□ 2.65
SDCBP2-203ENST00000381808 CLASP1Q7Z460 1538 aa31.57■■■□□ 2.64
SDCBP2-203ENST00000381808 CUL7Q14999 1698 aa31.54■■■□□ 2.64
SDCBP2-203ENST00000381808 RIMBP3CA6NJZ7 1639 aa31.52■■■□□ 2.64
SDCBP2-203ENST00000381808 RIMBP3BA6NNM3 1639 aa31.52■■■□□ 2.64
SDCBP2-203ENST00000381808 RIMBP3Q9UFD9 1639 aa31.52■■■□□ 2.64
SDCBP2-203ENST00000381808 IGF1RP08069 1367 aa31.49■■■□□ 2.63
SDCBP2-203ENST00000381808 CEP170Q5SW79 1584 aa31.48■■■□□ 2.63
SDCBP2-203ENST00000381808 RUSC2Q8N2Y8 1516 aa31.46■■■□□ 2.63
SDCBP2-203ENST00000381808 ARHGEF11O15085 1522 aa31.45■■■□□ 2.63
SDCBP2-203ENST00000381808 NUP160Q12769 1436 aa31.41■■■□□ 2.62
SDCBP2-203ENST00000381808 CARMIL1Q5VZK9 1371 aa31.32■■■□□ 2.6
SDCBP2-203ENST00000381808 SHROOM2Q13796 1616 aa31.25■■■□□ 2.59
SDCBP2-203ENST00000381808 CHIC1Q5VXU3 224 aa31.25■■■□□ 2.59
SDCBP2-203ENST00000381808 ARAP1Q96P48 1450 aa31.21■■■□□ 2.59
SDCBP2-203ENST00000381808 RAPGEF2Q9Y4G8 1499 aa31.18■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms