RNA–Protein interactions for RNA: ENST00000538004.5

NEK7-207, Transcript of NIMA related kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK7, Length 1,036 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK7-207ENST00000538004 NISCHQ9Y2I1 1504 aa45.16■■■■■ 4.82
NEK7-207ENST00000538004 CCDC180Q9P1Z9 1646 aa40.27■■■■■ 4.04
NEK7-207ENST00000538004 ABCC9O60706 1549 aa39.48■■■■□ 3.91
NEK7-207ENST00000538004 RB1CC1Q8TDY2 1594 aa37.93■■■■□ 3.66
NEK7-207ENST00000538004 NACADO15069 1562 aa37.84■■■■□ 3.65
NEK7-207ENST00000538004 DCAF8L2P0C7V8 631 aa37.76■■■■□ 3.64
NEK7-207ENST00000538004 ZCCHC6Q5VYS8 1495 aaKnown RBP37.6■■■■□ 3.61
NEK7-207ENST00000538004 MYO15BQ96JP2 1530 aa37.53■■■■□ 3.6
NEK7-207ENST00000538004 DCAF1Q9Y4B6 1507 aa37.34■■■■□ 3.57
NEK7-207ENST00000538004 UNC13AQ9UPW8 1703 aa37.19■■■■□ 3.54
NEK7-207ENST00000538004 PABPN1Q86U42 306 aaKnown RBP eCLIP36.82■■■■□ 3.48
NEK7-207ENST00000538004 BICRAQ9NZM4 1560 aa36.78■■■■□ 3.48
NEK7-207ENST00000538004 SCRIBQ14160 1630 aa36.74■■■■□ 3.47
NEK7-207ENST00000538004 SHROOM4Q9ULL8 1493 aa36.35■■■■□ 3.41
NEK7-207ENST00000538004 DNAJC5BQ9UF47 199 aa36.28■■■■□ 3.4
NEK7-207ENST00000538004 EIF4G1Q04637 1599 aaKnown RBP35.83■■■■□ 3.33
NEK7-207ENST00000538004 CC2D2AQ9P2K1 1620 aa35.73■■■■□ 3.31
NEK7-207ENST00000538004 CECR2Q9BXF3 1484 aa35.47■■■■□ 3.27
NEK7-207ENST00000538004 SMARCA4P51532 1647 aa35.11■■■■□ 3.21
NEK7-207ENST00000538004 BAZ1AQ9NRL2 1556 aaPredicted RBP35.02■■■■□ 3.2
NEK7-207ENST00000538004 ATAD2BQ9ULI0 1458 aa34.9■■■■□ 3.18
NEK7-207ENST00000538004 SMARCA2P51531 1590 aa34.87■■■■□ 3.17
NEK7-207ENST00000538004 NCAPD3P42695 1498 aa34.87■■■■□ 3.17
NEK7-207ENST00000538004 MROH2BQ7Z745 1585 aa34.81■■■■□ 3.16
NEK7-207ENST00000538004 HMGXB3Q12766 1538 aa34.75■■■■□ 3.15
NEK7-207ENST00000538004 PEG3Q9GZU2 1588 aa34.74■■■■□ 3.15
NEK7-207ENST00000538004 BAZ1BQ9UIG0 1483 aaKnown RBP34.64■■■■□ 3.14
NEK7-207ENST00000538004 WIZO95785 1651 aa34.48■■■■□ 3.11
NEK7-207ENST00000538004 RSF1Q96T23 1441 aaPredicted RBP34.33■■■■□ 3.09
NEK7-207ENST00000538004 NESP48681 1621 aa34.13■■■■□ 3.05
NEK7-207ENST00000538004 TOP2AP11388 1531 aaKnown RBP34.07■■■■□ 3.04
NEK7-207ENST00000538004 ERCC6Q03468 1493 aa34.04■■■■□ 3.04
NEK7-207ENST00000538004 LAMC3Q9Y6N6 1575 aa34.03■■■■□ 3.04
NEK7-207ENST00000538004 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
NEK7-207ENST00000538004 KIF21AQ7Z4S6 1674 aa33.81■■■■□ 3
NEK7-207ENST00000538004 PDS5BQ9NTI5 1447 aa33.77■■■■□ 3
NEK7-207ENST00000538004 CUX2O14529 1486 aa33.7■■■□□ 2.99
NEK7-207ENST00000538004 THOC2Q8NI27 1593 aaKnown RBP33.68■■■□□ 2.98
NEK7-207ENST00000538004 CCDC88BA6NC98 1476 aa33.64■■■□□ 2.98
NEK7-207ENST00000538004 CFTRP13569 1480 aa33.63■■■□□ 2.97
NEK7-207ENST00000538004 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
NEK7-207ENST00000538004 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
NEK7-207ENST00000538004 CEP164Q9UPV0 1460 aa33.49■■■□□ 2.95
NEK7-207ENST00000538004 MRC2Q9UBG0 1479 aa33.45■■■□□ 2.95
NEK7-207ENST00000538004 SUPT5HO00267 1087 aaKnown RBP33.38■■■□□ 2.93
NEK7-207ENST00000538004 WDR62O43379 1518 aa33.36■■■□□ 2.93
NEK7-207ENST00000538004 URB2Q14146 1524 aaKnown RBP33.18■■■□□ 2.9
NEK7-207ENST00000538004 TOPBP1Q92547 1522 aa32.97■■■□□ 2.87
NEK7-207ENST00000538004 DNMBPQ6XZF7 1577 aa32.93■■■□□ 2.86
NEK7-207ENST00000538004 ABCC8Q09428 1581 aa32.92■■■□□ 2.86
NEK7-207ENST00000538004 DNAJC5Q9H3Z4 198 aa32.85■■■□□ 2.85
NEK7-207ENST00000538004 IFT140Q96RY7 1462 aa32.76■■■□□ 2.84
NEK7-207ENST00000538004 CUX1P39880 1505 aa32.67■■■□□ 2.82
NEK7-207ENST00000538004 POLA1P09884 1462 aaPredicted RBP32.67■■■□□ 2.82
NEK7-207ENST00000538004 ZNF608Q9ULD9 1512 aaPredicted RBP32.64■■■□□ 2.82
NEK7-207ENST00000538004 TARBP1Q13395 1621 aaKnown RBP32.63■■■□□ 2.81
NEK7-207ENST00000538004 FGD5Q6ZNL6 1462 aa32.58■■■□□ 2.81
NEK7-207ENST00000538004 EIF4G3O43432 1585 aaKnown RBP32.57■■■□□ 2.8
NEK7-207ENST00000538004 RAD54L2Q9Y4B4 1467 aa32.53■■■□□ 2.8
NEK7-207ENST00000538004 SOGA1O94964 1423 aa32.51■■■□□ 2.79
NEK7-207ENST00000538004 AQRO60306 1485 aaKnown RBP eCLIP32.42■■■□□ 2.78
NEK7-207ENST00000538004 WRNQ14191 1432 aaPredicted RBP eCLIP32.4■■■□□ 2.78
NEK7-207ENST00000538004 BIVM-ERCC5R4GMW8 1640 aa32.4■■■□□ 2.78
NEK7-207ENST00000538004 WDR97A6NE52 1622 aa32.39■■■□□ 2.78
NEK7-207ENST00000538004 TOP2BQ02880 1626 aa32.37■■■□□ 2.77
NEK7-207ENST00000538004 SYNJ1O43426 1573 aa32.37■■■□□ 2.77
NEK7-207ENST00000538004 TDRD9Q8NDG6 1382 aaKnown RBP32.33■■■□□ 2.77
NEK7-207ENST00000538004 OSCARQ8IYS5 282 aa32.24■■■□□ 2.75
NEK7-207ENST00000538004 ABCA10Q8WWZ4 1543 aa32.24■■■□□ 2.75
NEK7-207ENST00000538004 CHD1O14646 1710 aa32.23■■■□□ 2.75
NEK7-207ENST00000538004 PBRM1Q86U86 1689 aa32.2■■■□□ 2.74
NEK7-207ENST00000538004 ABCA5Q8WWZ7 1642 aa32.17■■■□□ 2.74
NEK7-207ENST00000538004 SNAPC4Q5SXM2 1469 aa32.16■■■□□ 2.74
NEK7-207ENST00000538004 GRIN2BQ13224 1484 aa32.15■■■□□ 2.74
NEK7-207ENST00000538004 GAPVD1Q14C86 1478 aa32.15■■■□□ 2.74
NEK7-207ENST00000538004 MAGI1Q96QZ7 1491 aaPredicted RBP32.09■■■□□ 2.73
NEK7-207ENST00000538004 FBLN2P98095 1184 aa32.06■■■□□ 2.72
NEK7-207ENST00000538004 SYNJ2O15056 1496 aa31.97■■■□□ 2.71
NEK7-207ENST00000538004 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
NEK7-207ENST00000538004 ADAMTS12P58397 1594 aa31.88■■■□□ 2.69
NEK7-207ENST00000538004 ERICH3Q5RHP9 1530 aa31.86■■■□□ 2.69
NEK7-207ENST00000538004 RIMBP3CA6NJZ7 1639 aa31.84■■■□□ 2.69
NEK7-207ENST00000538004 RIMBP3BA6NNM3 1639 aa31.84■■■□□ 2.69
NEK7-207ENST00000538004 RIMBP3Q9UFD9 1639 aa31.84■■■□□ 2.69
NEK7-207ENST00000538004 ARHGEF11O15085 1522 aa31.79■■■□□ 2.68
NEK7-207ENST00000538004 CLASP1Q7Z460 1538 aa31.79■■■□□ 2.68
NEK7-207ENST00000538004 FHAD1B1AJZ9 1412 aa31.75■■■□□ 2.67
NEK7-207ENST00000538004 GRIN2AQ12879 1464 aa31.75■■■□□ 2.67
NEK7-207ENST00000538004 KIF27Q86VH2 1401 aa31.72■■■□□ 2.67
NEK7-207ENST00000538004 TRIM41Q8WV44 630 aa31.7■■■□□ 2.67
NEK7-207ENST00000538004 CEP170Q5SW79 1584 aa31.63■■■□□ 2.65
NEK7-207ENST00000538004 CUL7Q14999 1698 aa31.6■■■□□ 2.65
NEK7-207ENST00000538004 NUP160Q12769 1436 aa31.59■■■□□ 2.65
NEK7-207ENST00000538004 IGF1RP08069 1367 aa31.57■■■□□ 2.64
NEK7-207ENST00000538004 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
NEK7-207ENST00000538004 CYB5RLQ6IPT4 315 aa31.45■■■□□ 2.63
NEK7-207ENST00000538004 SHROOM2Q13796 1616 aa31.42■■■□□ 2.62
NEK7-207ENST00000538004 RUSC2Q8N2Y8 1516 aa31.41■■■□□ 2.62
NEK7-207ENST00000538004 CARMIL1Q5VZK9 1371 aa31.41■■■□□ 2.62
NEK7-207ENST00000538004 ERCC6L2Q5T890 1561 aa31.35■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms