RNA–Protein interactions for RNA: ENST00000396659.7

GATM-201, Transcript of glycine amidinotransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GATM, Length 2,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATM-201ENST00000396659 NISCHQ9Y2I1 1504 aa37.97■■■■□ 3.67
GATM-201ENST00000396659 SHROOM4Q9ULL8 1493 aa32.62■■■□□ 2.81
GATM-201ENST00000396659 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.75
GATM-201ENST00000396659 ZCCHC6Q5VYS8 1495 aaKnown RBP32.23■■■□□ 2.75
GATM-201ENST00000396659 CCDC180Q9P1Z9 1646 aa32.02■■■□□ 2.72
GATM-201ENST00000396659 CHIC1Q5VXU3 224 aa31.7■■■□□ 2.67
GATM-201ENST00000396659 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
GATM-201ENST00000396659 HRCP23327 699 aa31.63■■■□□ 2.65
GATM-201ENST00000396659 DCAF1Q9Y4B6 1507 aa31.21■■■□□ 2.59
GATM-201ENST00000396659 DCAF8L2P0C7V8 631 aa31.21■■■□□ 2.59
GATM-201ENST00000396659 PCGF6Q9BYE7 350 aa31.18■■■□□ 2.58
GATM-201ENST00000396659 PPARGC1BQ86YN6 1023 aaKnown RBP30.77■■■□□ 2.52
GATM-201ENST00000396659 LOC105371045A0A1W2PR82 267 aa30.72■■■□□ 2.51
GATM-201ENST00000396659 TRIM26Q12899 539 aaPredicted RBP30.56■■■□□ 2.48
GATM-201ENST00000396659 ABCC9O60706 1549 aa30.49■■■□□ 2.47
GATM-201ENST00000396659 PELP1Q8IZL8 1130 aaKnown RBP30.27■■■□□ 2.44
GATM-201ENST00000396659 RSF1Q96T23 1441 aaPredicted RBP30.25■■■□□ 2.43
GATM-201ENST00000396659 ZEB1P37275 1124 aaPredicted RBP30.16■■■□□ 2.42
GATM-201ENST00000396659 TRIM41Q8WV44 630 aa30.07■■■□□ 2.4
GATM-201ENST00000396659 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
GATM-201ENST00000396659 RB1CC1Q8TDY2 1594 aa30■■■□□ 2.39
GATM-201ENST00000396659 FAM9AQ8IZU1 332 aaPredicted RBP29.76■■■□□ 2.36
GATM-201ENST00000396659 CECR2Q9BXF3 1484 aa29.55■■■□□ 2.32
GATM-201ENST00000396659 NACADO15069 1562 aa29.51■■■□□ 2.32
GATM-201ENST00000396659 MROH2BQ7Z745 1585 aa29.51■■■□□ 2.32
GATM-201ENST00000396659 EHMT2Q96KQ7 1210 aa29.43■■■□□ 2.3
GATM-201ENST00000396659 SCAF1Q9H7N4 1312 aaKnown RBP29.41■■■□□ 2.3
GATM-201ENST00000396659 WIZO95785 1651 aa29.35■■■□□ 2.29
GATM-201ENST00000396659 MYT1Q01538 1121 aa29.29■■■□□ 2.28
GATM-201ENST00000396659 BAZ1AQ9NRL2 1556 aaPredicted RBP29.27■■■□□ 2.28
GATM-201ENST00000396659 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
GATM-201ENST00000396659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.26
GATM-201ENST00000396659 CCER1Q8TC90 406 aaPredicted RBP29.13■■■□□ 2.25
GATM-201ENST00000396659 WRNQ14191 1432 aaPredicted RBP eCLIP29.06■■■□□ 2.24
GATM-201ENST00000396659 ACIN1Q9UKV3 1341 aaKnown RBP29.01■■■□□ 2.23
GATM-201ENST00000396659 TOP2AP11388 1531 aaKnown RBP28.95■■■□□ 2.23
GATM-201ENST00000396659 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
GATM-201ENST00000396659 NEUROD1Q13562 356 aa28.88■■■□□ 2.21
GATM-201ENST00000396659 CEP162Q5TB80 1403 aa28.88■■■□□ 2.21
GATM-201ENST00000396659 ABCC8Q09428 1581 aa28.87■■■□□ 2.21
GATM-201ENST00000396659 DIEXFQ68CQ4 756 aaKnown RBP28.87■■■□□ 2.21
GATM-201ENST00000396659 TNIKQ9UKE5 1360 aa28.84■■■□□ 2.21
GATM-201ENST00000396659 SMARCA2P51531 1590 aa28.8■■■□□ 2.2
GATM-201ENST00000396659 SMARCA4P51532 1647 aa28.78■■■□□ 2.2
GATM-201ENST00000396659 EEA1Q15075 1411 aa28.78■■■□□ 2.2
GATM-201ENST00000396659 CENPBP07199 599 aaPredicted RBP28.77■■■□□ 2.2
GATM-201ENST00000396659 SOGA1O94964 1423 aa28.74■■■□□ 2.19
GATM-201ENST00000396659 CSRNP3Q8WYN3 585 aa28.66■■■□□ 2.18
GATM-201ENST00000396659 GTF3C3Q9Y5Q9 886 aa28.64■■■□□ 2.18
GATM-201ENST00000396659 TTBK1Q5TCY1 1321 aaPredicted RBP28.64■■■□□ 2.17
GATM-201ENST00000396659 GOLGA3Q08378 1498 aa28.56■■■□□ 2.16
GATM-201ENST00000396659 RUSC2Q8N2Y8 1516 aa28.55■■■□□ 2.16
GATM-201ENST00000396659 ZNF316A6NFI3 1004 aaPredicted RBP28.55■■■□□ 2.16
GATM-201ENST00000396659 UBTFP17480 764 aaKnown RBP28.55■■■□□ 2.16
GATM-201ENST00000396659 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
GATM-201ENST00000396659 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
GATM-201ENST00000396659 KIF21BO75037 1637 aa28.31■■■□□ 2.12
GATM-201ENST00000396659 PEG3Q9GZU2 1588 aa28.26■■■□□ 2.11
GATM-201ENST00000396659 CLIP1P30622 1438 aa28.23■■■□□ 2.11
GATM-201ENST00000396659 VPS8Q8N3P4 1428 aa28.21■■■□□ 2.11
GATM-201ENST00000396659 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
GATM-201ENST00000396659 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
GATM-201ENST00000396659 BAZ1BQ9UIG0 1483 aaKnown RBP28.17■■■□□ 2.1
GATM-201ENST00000396659 MIER1Q8N108 512 aa28.16■■■□□ 2.1
GATM-201ENST00000396659 YTHDC1Q96MU7 727 aaKnown RBP28.12■■■□□ 2.09
GATM-201ENST00000396659 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
GATM-201ENST00000396659 APLP2Q06481 763 aa28.06■■■□□ 2.08
GATM-201ENST00000396659 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
GATM-201ENST00000396659 PABPN1Q86U42 306 aaKnown RBP eCLIP28■■■□□ 2.07
GATM-201ENST00000396659 CLSPNQ9HAW4 1339 aa27.96■■■□□ 2.07
GATM-201ENST00000396659 ATAD2BQ9ULI0 1458 aa27.94■■■□□ 2.06
GATM-201ENST00000396659 TOP2BQ02880 1626 aa27.84■■■□□ 2.05
GATM-201ENST00000396659 DHX57Q6P158 1386 aaKnown RBP27.81■■■□□ 2.04
GATM-201ENST00000396659 ERICH3Q5RHP9 1530 aa27.79■■■□□ 2.04
GATM-201ENST00000396659 PRXQ9BXM0 1461 aa27.74■■■□□ 2.03
GATM-201ENST00000396659 RANGAP1P46060 587 aaPredicted RBP27.74■■■□□ 2.03
GATM-201ENST00000396659 BIVM-ERCC5R4GMW8 1640 aa27.72■■■□□ 2.03
GATM-201ENST00000396659 ARAP1Q96P48 1450 aa27.72■■■□□ 2.03
GATM-201ENST00000396659 RRBP1Q9P2E9 1410 aaKnown RBP27.65■■■□□ 2.02
GATM-201ENST00000396659 KANK4Q5T7N3 995 aaPredicted RBP27.62■■■□□ 2.01
GATM-201ENST00000396659 CUX2O14529 1486 aa27.6■■■□□ 2.01
GATM-201ENST00000396659 SUPT16HQ9Y5B9 1047 aaKnown RBP27.5■■□□□ 1.99
GATM-201ENST00000396659 KIF27Q86VH2 1401 aa27.48■■□□□ 1.99
GATM-201ENST00000396659 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
GATM-201ENST00000396659 CUX1P39880 1505 aa27.44■■□□□ 1.98
GATM-201ENST00000396659 ARHGAP35Q9NRY4 1499 aa27.4■■□□□ 1.98
GATM-201ENST00000396659 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
GATM-201ENST00000396659 NCAPD3P42695 1498 aa27.34■■□□□ 1.97
GATM-201ENST00000396659 RAB3GAP2Q9H2M9 1393 aa27.27■■□□□ 1.96
GATM-201ENST00000396659 MAP3K1Q13233 1512 aa27.27■■□□□ 1.96
GATM-201ENST00000396659 MAPKBP1O60336 1514 aa27.26■■□□□ 1.95
GATM-201ENST00000396659 CFTRP13569 1480 aa27.26■■□□□ 1.95
GATM-201ENST00000396659 ITGAEP38570 1179 aa27.22■■□□□ 1.95
GATM-201ENST00000396659 TIAM1Q13009 1591 aa27.19■■□□□ 1.94
GATM-201ENST00000396659 TSHZ2Q9NRE2 1034 aa27.18■■□□□ 1.94
GATM-201ENST00000396659 SETD5Q9C0A6 1442 aa27.17■■□□□ 1.94
GATM-201ENST00000396659 IGF1RP08069 1367 aa27.13■■□□□ 1.93
GATM-201ENST00000396659 KCNH8Q96L42 1107 aa27.11■■□□□ 1.93
GATM-201ENST00000396659 LRRC9Q6ZRR7 1453 aa27.11■■□□□ 1.93
GATM-201ENST00000396659 BCL11AQ9H165 835 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms