Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SFTPBP07988 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SFTPBP07988 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.24■□□□□ 0.19
SFTPBP07988 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.24■□□□□ 0.19
SFTPBP07988 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.24■□□□□ 0.19
SFTPBP07988 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.24■□□□□ 0.19
SFTPBP07988 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SFTPBP07988 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.24■□□□□ 0.19
SFTPBP07988 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SFTPBP07988 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
SFTPBP07988 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
SFTPBP07988 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SFTPBP07988 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SFTPBP07988 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SFTPBP07988 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.23■□□□□ 0.19
SFTPBP07988 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.23■□□□□ 0.19
SFTPBP07988 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SFTPBP07988 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SFTPBP07988 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.23■□□□□ 0.19
SFTPBP07988 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
SFTPBP07988 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 C1QL1P1-201ENST00000568105 661 ntBASIC16.23■□□□□ 0.19
SFTPBP07988 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SFTPBP07988 HLA-A-209ENST00000638375 975 ntBASIC16.23■□□□□ 0.19
SFTPBP07988 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SFTPBP07988 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SFTPBP07988 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SFTPBP07988 AL031598.1-201ENST00000561511 1773 ntBASIC16.23■□□□□ 0.19
SFTPBP07988 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
SFTPBP07988 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
SFTPBP07988 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.22■□□□□ 0.19
SFTPBP07988 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
SFTPBP07988 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.22■□□□□ 0.19
SFTPBP07988 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SFTPBP07988 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.22■□□□□ 0.19
SFTPBP07988 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SFTPBP07988 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.22■□□□□ 0.19
SFTPBP07988 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SFTPBP07988 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.22■□□□□ 0.19
SFTPBP07988 RPS2P55-201ENST00000397318 883 ntBASIC16.22■□□□□ 0.19
SFTPBP07988 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
SFTPBP07988 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
SFTPBP07988 SNORA78-201ENST00000459373 127 ntBASIC16.22■□□□□ 0.19
SFTPBP07988 AC107956.1-201ENST00000494359 873 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms