Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM56-RWDD3S4R434 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 SLC29A4P2-201ENST00000504749 1089 ntBASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 HLA-A-209ENST00000638375 975 ntBASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 KRT8P45-201ENST00000414328 1447 ntBASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 KRT8P32-201ENST00000512863 1461 ntBASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM56-RWDD3S4R434 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 FZD10-202ENST00000539839 3282 ntBASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 PRORSD1P-202ENST00000563365 2154 ntBASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TMEM56-RWDD3S4R434 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms