Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC31.54■■■□□ 2.64
ARFGEF1Q9Y6D6 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
ARFGEF1Q9Y6D6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.53■■■□□ 2.64
ARFGEF1Q9Y6D6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
ARFGEF1Q9Y6D6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ARFGEF1Q9Y6D6 DUX4L9-201ENST00000449051 1259 ntBASIC31.5■■■□□ 2.63
ARFGEF1Q9Y6D6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.5■■■□□ 2.63
ARFGEF1Q9Y6D6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ARFGEF1Q9Y6D6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ARFGEF1Q9Y6D6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ARFGEF1Q9Y6D6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
ARFGEF1Q9Y6D6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.49■■■□□ 2.63
ARFGEF1Q9Y6D6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
ARFGEF1Q9Y6D6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ARFGEF1Q9Y6D6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ARFGEF1Q9Y6D6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.47■■■□□ 2.63
ARFGEF1Q9Y6D6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.47■■■□□ 2.63
ARFGEF1Q9Y6D6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.46■■■□□ 2.63
ARFGEF1Q9Y6D6 GUSBP5-201ENST00000418136 578 ntBASIC31.46■■■□□ 2.63
ARFGEF1Q9Y6D6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.46■■■□□ 2.63
ARFGEF1Q9Y6D6 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.45■■■□□ 2.63
ARFGEF1Q9Y6D6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
ARFGEF1Q9Y6D6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
ARFGEF1Q9Y6D6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC31.45■■■□□ 2.62
ARFGEF1Q9Y6D6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.45■■■□□ 2.62
ARFGEF1Q9Y6D6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ARFGEF1Q9Y6D6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ARFGEF1Q9Y6D6 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ARFGEF1Q9Y6D6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ARFGEF1Q9Y6D6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ARFGEF1Q9Y6D6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ARFGEF1Q9Y6D6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC31.42■■■□□ 2.62
ARFGEF1Q9Y6D6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ARFGEF1Q9Y6D6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
ARFGEF1Q9Y6D6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.42■■■□□ 2.62
ARFGEF1Q9Y6D6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARFGEF1Q9Y6D6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ARFGEF1Q9Y6D6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.41■■■□□ 2.62
ARFGEF1Q9Y6D6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.4■■■□□ 2.62
ARFGEF1Q9Y6D6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ARFGEF1Q9Y6D6 AC025884.2-201ENST00000553429 711 ntBASIC31.4■■■□□ 2.62
ARFGEF1Q9Y6D6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
ARFGEF1Q9Y6D6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
ARFGEF1Q9Y6D6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 THA1P-201ENST00000590384 1145 ntBASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.38■■■□□ 2.61
ARFGEF1Q9Y6D6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
ARFGEF1Q9Y6D6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ARFGEF1Q9Y6D6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ARFGEF1Q9Y6D6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ARFGEF1Q9Y6D6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 KRT8P33-201ENST00000508125 1423 ntBASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 SPCS2P3-201ENST00000500401 656 ntBASIC31.35■■■□□ 2.61
ARFGEF1Q9Y6D6 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC31.34■■■□□ 2.61
ARFGEF1Q9Y6D6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
ARFGEF1Q9Y6D6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.33■■■□□ 2.61
ARFGEF1Q9Y6D6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
ARFGEF1Q9Y6D6 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.32■■■□□ 2.6
ARFGEF1Q9Y6D6 AC010980.1-201ENST00000587192 1142 ntBASIC31.32■■■□□ 2.6
ARFGEF1Q9Y6D6 MIR4508-201ENST00000584178 70 ntBASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 RAP2CP1-202ENST00000605179 643 ntBASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 AC026202.3-201ENST00000600805 1127 ntBASIC31.31■■■□□ 2.6
ARFGEF1Q9Y6D6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.3■■■□□ 2.6
ARFGEF1Q9Y6D6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
ARFGEF1Q9Y6D6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARFGEF1Q9Y6D6 AC093536.1-201ENST00000569153 554 ntBASIC31.29■■■□□ 2.6
ARFGEF1Q9Y6D6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARFGEF1Q9Y6D6 RP9P-202ENST00000450133 1212 ntBASIC31.28■■■□□ 2.6
ARFGEF1Q9Y6D6 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARFGEF1Q9Y6D6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARFGEF1Q9Y6D6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARFGEF1Q9Y6D6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARFGEF1Q9Y6D6 PVT1_1.1-201ENST00000615125 194 ntBASIC31.27■■■□□ 2.6
ARFGEF1Q9Y6D6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARFGEF1Q9Y6D6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ARFGEF1Q9Y6D6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.26■■■□□ 2.6
ARFGEF1Q9Y6D6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms