Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
TCAF1Q9Y4C2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
TCAF1Q9Y4C2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
TCAF1Q9Y4C2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
TCAF1Q9Y4C2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
TCAF1Q9Y4C2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TCAF1Q9Y4C2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TCAF1Q9Y4C2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
TCAF1Q9Y4C2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
TCAF1Q9Y4C2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.28■■□□□ 1.64
TCAF1Q9Y4C2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
TCAF1Q9Y4C2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TCAF1Q9Y4C2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
TCAF1Q9Y4C2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
TCAF1Q9Y4C2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.27■■□□□ 1.64
TCAF1Q9Y4C2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TCAF1Q9Y4C2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TCAF1Q9Y4C2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TCAF1Q9Y4C2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
TCAF1Q9Y4C2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
TCAF1Q9Y4C2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
TCAF1Q9Y4C2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.26■■□□□ 1.63
TCAF1Q9Y4C2 LINC01971-201ENST00000617888 1048 ntBASIC25.26■■□□□ 1.63
TCAF1Q9Y4C2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
TCAF1Q9Y4C2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
TCAF1Q9Y4C2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.25■■□□□ 1.63
TCAF1Q9Y4C2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
TCAF1Q9Y4C2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TCAF1Q9Y4C2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.25■■□□□ 1.63
TCAF1Q9Y4C2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
TCAF1Q9Y4C2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TCAF1Q9Y4C2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.24■■□□□ 1.63
TCAF1Q9Y4C2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.24■■□□□ 1.63
TCAF1Q9Y4C2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
TCAF1Q9Y4C2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
TCAF1Q9Y4C2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.24■■□□□ 1.63
TCAF1Q9Y4C2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
TCAF1Q9Y4C2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.24■■□□□ 1.63
TCAF1Q9Y4C2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TCAF1Q9Y4C2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
TCAF1Q9Y4C2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.22■■□□□ 1.63
TCAF1Q9Y4C2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TCAF1Q9Y4C2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.22■■□□□ 1.63
TCAF1Q9Y4C2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
TCAF1Q9Y4C2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
TCAF1Q9Y4C2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.21■■□□□ 1.63
TCAF1Q9Y4C2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
TCAF1Q9Y4C2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.21■■□□□ 1.63
TCAF1Q9Y4C2 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.21■■□□□ 1.63
TCAF1Q9Y4C2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TCAF1Q9Y4C2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.2■■□□□ 1.62
TCAF1Q9Y4C2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.2■■□□□ 1.62
TCAF1Q9Y4C2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
TCAF1Q9Y4C2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
TCAF1Q9Y4C2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
TCAF1Q9Y4C2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.19■■□□□ 1.62
TCAF1Q9Y4C2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
TCAF1Q9Y4C2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.19■■□□□ 1.62
TCAF1Q9Y4C2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
TCAF1Q9Y4C2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.18■■□□□ 1.62
TCAF1Q9Y4C2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TCAF1Q9Y4C2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TCAF1Q9Y4C2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
TCAF1Q9Y4C2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
TCAF1Q9Y4C2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L13-201ENST00000554103 1267 ntBASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L15-201ENST00000611059 1267 ntBASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L23-201ENST00000615195 1269 ntBASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L24-201ENST00000617576 1269 ntBASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L22-201ENST00000618238 1269 ntBASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L20-201ENST00000619712 1269 ntBASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L21-201ENST00000622058 1269 ntBASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L10-201ENST00000622460 1267 ntBASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L25-201ENST00000624915 1269 ntBASIC25.16■■□□□ 1.62
TCAF1Q9Y4C2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TCAF1Q9Y4C2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.15■■□□□ 1.62
TCAF1Q9Y4C2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.15■■□□□ 1.62
TCAF1Q9Y4C2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.15■■□□□ 1.62
TCAF1Q9Y4C2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.14■■□□□ 1.62
TCAF1Q9Y4C2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TCAF1Q9Y4C2 ZNRF2P2-203ENST00000454624 420 ntBASIC25.14■■□□□ 1.62
TCAF1Q9Y4C2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.14■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L11-201ENST00000611504 1267 ntBASIC25.14■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L12-201ENST00000614593 1267 ntBASIC25.14■■□□□ 1.62
TCAF1Q9Y4C2 DUX4L14-201ENST00000621227 1267 ntBASIC25.14■■□□□ 1.62
TCAF1Q9Y4C2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
TCAF1Q9Y4C2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
TCAF1Q9Y4C2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TCAF1Q9Y4C2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TCAF1Q9Y4C2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
TCAF1Q9Y4C2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TCAF1Q9Y4C2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TCAF1Q9Y4C2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TCAF1Q9Y4C2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.12■■□□□ 1.61
TCAF1Q9Y4C2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TCAF1Q9Y4C2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.11■■□□□ 1.61
TCAF1Q9Y4C2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TCAF1Q9Y4C2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.11■■□□□ 1.61
TCAF1Q9Y4C2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
TCAF1Q9Y4C2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms