Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
MAP1LC3AQ9H492 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MAP1LC3AQ9H492 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.25■□□□□ 0.51
MAP1LC3AQ9H492 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.24■□□□□ 0.51
MAP1LC3AQ9H492 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC18.24■□□□□ 0.51
MAP1LC3AQ9H492 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.24■□□□□ 0.51
MAP1LC3AQ9H492 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.24■□□□□ 0.51
MAP1LC3AQ9H492 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.23■□□□□ 0.51
MAP1LC3AQ9H492 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MAP1LC3AQ9H492 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MAP1LC3AQ9H492 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.23■□□□□ 0.51
MAP1LC3AQ9H492 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MAP1LC3AQ9H492 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MAP1LC3AQ9H492 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MAP1LC3AQ9H492 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 AC093323.1-202ENST00000635031 2045 ntBASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MAP1LC3AQ9H492 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MAP1LC3AQ9H492 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MAP1LC3AQ9H492 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MAP1LC3AQ9H492 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MAP1LC3AQ9H492 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MAP1LC3AQ9H492 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MAP1LC3AQ9H492 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC18.2■□□□□ 0.5
MAP1LC3AQ9H492 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MAP1LC3AQ9H492 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
MAP1LC3AQ9H492 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MAP1LC3AQ9H492 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MAP1LC3AQ9H492 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MAP1LC3AQ9H492 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
MAP1LC3AQ9H492 AL031258.1-201ENST00000623562 325 ntBASIC18.19■□□□□ 0.5
MAP1LC3AQ9H492 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MAP1LC3AQ9H492 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MAP1LC3AQ9H492 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MAP1LC3AQ9H492 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MAP1LC3AQ9H492 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MAP1LC3AQ9H492 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MAP1LC3AQ9H492 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
MAP1LC3AQ9H492 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MAP1LC3AQ9H492 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MAP1LC3AQ9H492 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.17■□□□□ 0.5
MAP1LC3AQ9H492 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.17■□□□□ 0.5
MAP1LC3AQ9H492 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MAP1LC3AQ9H492 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MAP1LC3AQ9H492 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 AP002414.2-202ENST00000590929 1450 ntBASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 ZNRF2P1-201ENST00000441407 443 ntBASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MAP1LC3AQ9H492 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MAP1LC3AQ9H492 AC100797.4-201ENST00000631653 1827 ntBASIC18.15■□□□□ 0.5
MAP1LC3AQ9H492 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
MAP1LC3AQ9H492 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MAP1LC3AQ9H492 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
MAP1LC3AQ9H492 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
MAP1LC3AQ9H492 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MAP1LC3AQ9H492 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MAP1LC3AQ9H492 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.14■□□□□ 0.49
MAP1LC3AQ9H492 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.14■□□□□ 0.49
MAP1LC3AQ9H492 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MAP1LC3AQ9H492 AC127502.1-201ENST00000399971 1502 ntBASIC18.13■□□□□ 0.49
MAP1LC3AQ9H492 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
MAP1LC3AQ9H492 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MAP1LC3AQ9H492 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MAP1LC3AQ9H492 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MAP1LC3AQ9H492 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MAP1LC3AQ9H492 DUSP8P4-201ENST00000399538 1761 ntBASIC18.12■□□□□ 0.49
MAP1LC3AQ9H492 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
MAP1LC3AQ9H492 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MAP1LC3AQ9H492 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MAP1LC3AQ9H492 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MAP1LC3AQ9H492 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MAP1LC3AQ9H492 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.11■□□□□ 0.49
MAP1LC3AQ9H492 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MAP1LC3AQ9H492 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.11■□□□□ 0.49
MAP1LC3AQ9H492 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MAP1LC3AQ9H492 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.1■□□□□ 0.49
MAP1LC3AQ9H492 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MAP1LC3AQ9H492 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MAP1LC3AQ9H492 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MAP1LC3AQ9H492 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MAP1LC3AQ9H492 AC092803.2-201ENST00000564287 1899 ntBASIC18.08■□□□□ 0.49
MAP1LC3AQ9H492 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.08■□□□□ 0.48
MAP1LC3AQ9H492 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MAP1LC3AQ9H492 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MAP1LC3AQ9H492 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MAP1LC3AQ9H492 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms