Protein–RNA interactions for Protein: Q86YC2

PALB2, Partner and localizer of BRCA2, humanhuman

Predictions only

Length 1,186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2Q86YC2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
PALB2Q86YC2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.45■■□□□ 1.98
PALB2Q86YC2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.44■■□□□ 1.98
PALB2Q86YC2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.44■■□□□ 1.98
PALB2Q86YC2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.44■■□□□ 1.98
PALB2Q86YC2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.43■■□□□ 1.98
PALB2Q86YC2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
PALB2Q86YC2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PALB2Q86YC2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.43■■□□□ 1.98
PALB2Q86YC2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
PALB2Q86YC2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PALB2Q86YC2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
PALB2Q86YC2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
PALB2Q86YC2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.42■■□□□ 1.98
PALB2Q86YC2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.42■■□□□ 1.98
PALB2Q86YC2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.41■■□□□ 1.98
PALB2Q86YC2 RARRES2P2-201ENST00000394842 485 ntBASIC27.41■■□□□ 1.98
PALB2Q86YC2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.41■■□□□ 1.98
PALB2Q86YC2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
PALB2Q86YC2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.41■■□□□ 1.98
PALB2Q86YC2 WHAMMP2-203ENST00000563942 1603 ntBASIC27.41■■□□□ 1.98
PALB2Q86YC2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PALB2Q86YC2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
PALB2Q86YC2 AC100797.4-201ENST00000631653 1827 ntBASIC27.39■■□□□ 1.98
PALB2Q86YC2 AC135983.2-203ENST00000454486 1613 ntBASIC27.39■■□□□ 1.98
PALB2Q86YC2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
PALB2Q86YC2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.39■■□□□ 1.97
PALB2Q86YC2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PALB2Q86YC2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.39■■□□□ 1.97
PALB2Q86YC2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
PALB2Q86YC2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
PALB2Q86YC2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
PALB2Q86YC2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.36■■□□□ 1.97
PALB2Q86YC2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PALB2Q86YC2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PALB2Q86YC2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PALB2Q86YC2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PALB2Q86YC2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PALB2Q86YC2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.35■■□□□ 1.97
PALB2Q86YC2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PALB2Q86YC2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.35■■□□□ 1.97
PALB2Q86YC2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PALB2Q86YC2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PALB2Q86YC2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
PALB2Q86YC2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
PALB2Q86YC2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.33■■□□□ 1.97
PALB2Q86YC2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PALB2Q86YC2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.33■■□□□ 1.97
PALB2Q86YC2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
PALB2Q86YC2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
PALB2Q86YC2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PALB2Q86YC2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PALB2Q86YC2 RNF126P1-201ENST00000567452 1320 ntBASIC27.32■■□□□ 1.96
PALB2Q86YC2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.31■■□□□ 1.96
PALB2Q86YC2 AC022413.1-201ENST00000624602 984 ntBASIC27.31■■□□□ 1.96
PALB2Q86YC2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PALB2Q86YC2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.3■■□□□ 1.96
PALB2Q86YC2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.3■■□□□ 1.96
PALB2Q86YC2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.3■■□□□ 1.96
PALB2Q86YC2 AC008813.1-201ENST00000536597 885 ntBASIC27.3■■□□□ 1.96
PALB2Q86YC2 ABHD17AP5-201ENST00000580133 923 ntBASIC27.3■■□□□ 1.96
PALB2Q86YC2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.3■■□□□ 1.96
PALB2Q86YC2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PALB2Q86YC2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
PALB2Q86YC2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
PALB2Q86YC2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PALB2Q86YC2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
PALB2Q86YC2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.29■■□□□ 1.96
PALB2Q86YC2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PALB2Q86YC2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
PALB2Q86YC2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PALB2Q86YC2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
PALB2Q86YC2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
PALB2Q86YC2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PALB2Q86YC2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PALB2Q86YC2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.27■■□□□ 1.96
PALB2Q86YC2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
PALB2Q86YC2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC27.27■■□□□ 1.96
PALB2Q86YC2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
PALB2Q86YC2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.26■■□□□ 1.96
PALB2Q86YC2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
PALB2Q86YC2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
PALB2Q86YC2 AC110285.7-201ENST00000624417 1536 ntBASIC27.26■■□□□ 1.95
PALB2Q86YC2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.25■■□□□ 1.95
PALB2Q86YC2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PALB2Q86YC2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
PALB2Q86YC2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PALB2Q86YC2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.24■■□□□ 1.95
PALB2Q86YC2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PALB2Q86YC2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PALB2Q86YC2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
PALB2Q86YC2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PALB2Q86YC2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.23■■□□□ 1.95
PALB2Q86YC2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PALB2Q86YC2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
PALB2Q86YC2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
PALB2Q86YC2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
PALB2Q86YC2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.21■■□□□ 1.95
PALB2Q86YC2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.21■■□□□ 1.95
PALB2Q86YC2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.2■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms