Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 AC091060.1-201ENST00000623524 1766 ntBASIC19.47■□□□□ 0.71
GFI1BQ5VTD9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
GFI1BQ5VTD9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GFI1BQ5VTD9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.47■□□□□ 0.71
GFI1BQ5VTD9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.47■□□□□ 0.71
GFI1BQ5VTD9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1BQ5VTD9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1BQ5VTD9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GFI1BQ5VTD9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
GFI1BQ5VTD9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1BQ5VTD9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1BQ5VTD9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1BQ5VTD9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
GFI1BQ5VTD9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GFI1BQ5VTD9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1BQ5VTD9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
GFI1BQ5VTD9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GFI1BQ5VTD9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.44■□□□□ 0.7
GFI1BQ5VTD9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GFI1BQ5VTD9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1BQ5VTD9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1BQ5VTD9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1BQ5VTD9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1BQ5VTD9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.43■□□□□ 0.7
GFI1BQ5VTD9 BX255925.1-201ENST00000566954 1854 ntBASIC19.43■□□□□ 0.7
GFI1BQ5VTD9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GFI1BQ5VTD9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GFI1BQ5VTD9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.42■□□□□ 0.7
GFI1BQ5VTD9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GFI1BQ5VTD9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GFI1BQ5VTD9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.42■□□□□ 0.7
GFI1BQ5VTD9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFI1BQ5VTD9 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GFI1BQ5VTD9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GFI1BQ5VTD9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFI1BQ5VTD9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.4■□□□□ 0.7
GFI1BQ5VTD9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GFI1BQ5VTD9 AC136428.2-201ENST00000563187 214 ntBASIC19.4■□□□□ 0.7
GFI1BQ5VTD9 AC097358.2-201ENST00000607541 1159 ntBASIC19.4■□□□□ 0.7
GFI1BQ5VTD9 AL391121.1-201ENST00000607967 1349 ntBASIC19.4■□□□□ 0.7
GFI1BQ5VTD9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GFI1BQ5VTD9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFI1BQ5VTD9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.39■□□□□ 0.69
GFI1BQ5VTD9 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
GFI1BQ5VTD9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
GFI1BQ5VTD9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GFI1BQ5VTD9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GFI1BQ5VTD9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
GFI1BQ5VTD9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GFI1BQ5VTD9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.38■□□□□ 0.69
GFI1BQ5VTD9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
GFI1BQ5VTD9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
GFI1BQ5VTD9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 CAHM-201ENST00000604200 896 ntBASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
GFI1BQ5VTD9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 AC010864.1-201ENST00000609407 1511 ntBASIC19.35■□□□□ 0.69
GFI1BQ5VTD9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFI1BQ5VTD9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFI1BQ5VTD9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFI1BQ5VTD9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
GFI1BQ5VTD9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFI1BQ5VTD9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFI1BQ5VTD9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFI1BQ5VTD9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
GFI1BQ5VTD9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.33■□□□□ 0.68
GFI1BQ5VTD9 CLDN5-201ENST00000403084 2357 ntBASIC19.33■□□□□ 0.68
GFI1BQ5VTD9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GFI1BQ5VTD9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.32■□□□□ 0.68
GFI1BQ5VTD9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFI1BQ5VTD9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFI1BQ5VTD9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GFI1BQ5VTD9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFI1BQ5VTD9 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFI1BQ5VTD9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GFI1BQ5VTD9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms