Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
UBR4Q5T4S7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
UBR4Q5T4S7 AL031848.2-201ENST00000607670 837 ntBASIC14.35□□□□□ -0.11
UBR4Q5T4S7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.35□□□□□ -0.11
UBR4Q5T4S7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
UBR4Q5T4S7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBR4Q5T4S7 AC139795.1-202ENST00000500444 432 ntBASIC14.34□□□□□ -0.11
UBR4Q5T4S7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
UBR4Q5T4S7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC14.34□□□□□ -0.11
UBR4Q5T4S7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
UBR4Q5T4S7 MIR6765-201ENST00000614092 87 ntBASIC14.33□□□□□ -0.11
UBR4Q5T4S7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.33□□□□□ -0.12
UBR4Q5T4S7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBR4Q5T4S7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBR4Q5T4S7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
UBR4Q5T4S7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.33□□□□□ -0.12
UBR4Q5T4S7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC14.33□□□□□ -0.12
UBR4Q5T4S7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
UBR4Q5T4S7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC14.32□□□□□ -0.12
UBR4Q5T4S7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
UBR4Q5T4S7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.32□□□□□ -0.12
UBR4Q5T4S7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC14.32□□□□□ -0.12
UBR4Q5T4S7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
UBR4Q5T4S7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
UBR4Q5T4S7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBR4Q5T4S7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC14.31□□□□□ -0.12
UBR4Q5T4S7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
UBR4Q5T4S7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.31□□□□□ -0.12
UBR4Q5T4S7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC14.31□□□□□ -0.12
UBR4Q5T4S7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
UBR4Q5T4S7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
UBR4Q5T4S7 AL157400.5-201ENST00000507624 621 ntBASIC14.3□□□□□ -0.12
UBR4Q5T4S7 AC110285.6-201ENST00000617652 491 ntBASIC14.3□□□□□ -0.12
UBR4Q5T4S7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.3□□□□□ -0.12
UBR4Q5T4S7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.3□□□□□ -0.12
UBR4Q5T4S7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 AC074183.2-201ENST00000623112 922 ntBASIC14.29□□□□□ -0.12
UBR4Q5T4S7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 AC120057.4-201ENST00000624722 1615 ntBASIC14.29□□□□□ -0.12
UBR4Q5T4S7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 AC096631.2-201ENST00000436136 790 ntBASIC14.29□□□□□ -0.12
UBR4Q5T4S7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 LINC00273-201ENST00000539813 1452 ntBASIC14.29□□□□□ -0.12
UBR4Q5T4S7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
UBR4Q5T4S7 ECEL1P2-201ENST00000461596 1295 ntBASIC14.29□□□□□ -0.12
UBR4Q5T4S7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
UBR4Q5T4S7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
UBR4Q5T4S7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC14.27□□□□□ -0.12
UBR4Q5T4S7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
UBR4Q5T4S7 AC131281.2-201ENST00000520478 145 ntBASIC14.27□□□□□ -0.13
UBR4Q5T4S7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBR4Q5T4S7 AC133561.4-201ENST00000566112 224 ntBASIC14.27□□□□□ -0.13
UBR4Q5T4S7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
UBR4Q5T4S7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UBR4Q5T4S7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
UBR4Q5T4S7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBR4Q5T4S7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBR4Q5T4S7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBR4Q5T4S7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBR4Q5T4S7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBR4Q5T4S7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC14.26□□□□□ -0.13
UBR4Q5T4S7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC14.26□□□□□ -0.13
UBR4Q5T4S7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UBR4Q5T4S7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBR4Q5T4S7 PVT1_1.1-201ENST00000615125 194 ntBASIC14.26□□□□□ -0.13
UBR4Q5T4S7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.25□□□□□ -0.13
UBR4Q5T4S7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC14.25□□□□□ -0.13
UBR4Q5T4S7 AL162430.1-201ENST00000480705 870 ntBASIC14.25□□□□□ -0.13
UBR4Q5T4S7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBR4Q5T4S7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBR4Q5T4S7 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.25□□□□□ -0.13
UBR4Q5T4S7 KRT125P-201ENST00000546827 989 ntBASIC14.25□□□□□ -0.13
UBR4Q5T4S7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC14.25□□□□□ -0.13
UBR4Q5T4S7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC14.25□□□□□ -0.13
UBR4Q5T4S7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
UBR4Q5T4S7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.24□□□□□ -0.13
UBR4Q5T4S7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.24□□□□□ -0.13
UBR4Q5T4S7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UBR4Q5T4S7 AL136116.3-201ENST00000402907 1138 ntBASIC14.24□□□□□ -0.13
UBR4Q5T4S7 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.24□□□□□ -0.13
UBR4Q5T4S7 AC148477.6-201ENST00000623746 465 ntBASIC14.24□□□□□ -0.13
UBR4Q5T4S7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 MIR4508-201ENST00000584178 70 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms