Protein–RNA interactions for Protein: Q2NKX9

C2orf68, UPF0561 protein C2orf68, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf68Q2NKX9 AC093323.1-202ENST00000635031 2045 ntBASIC21.29■■□□□ 1
C2orf68Q2NKX9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
C2orf68Q2NKX9 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.29■■□□□ 1
C2orf68Q2NKX9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
C2orf68Q2NKX9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C2orf68Q2NKX9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.29■■□□□ 1
C2orf68Q2NKX9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
C2orf68Q2NKX9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.28■■□□□ 1
C2orf68Q2NKX9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
C2orf68Q2NKX9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C2orf68Q2NKX9 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.28■■□□□ 1
C2orf68Q2NKX9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.28■■□□□ 1
C2orf68Q2NKX9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C2orf68Q2NKX9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.27■■□□□ 1
C2orf68Q2NKX9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C2orf68Q2NKX9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
C2orf68Q2NKX9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
C2orf68Q2NKX9 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
C2orf68Q2NKX9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C2orf68Q2NKX9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.27■■□□□ 1
C2orf68Q2NKX9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.27■■□□□ 1
C2orf68Q2NKX9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.27■■□□□ 1
C2orf68Q2NKX9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.27■■□□□ 1
C2orf68Q2NKX9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.27■■□□□ 1
C2orf68Q2NKX9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C2orf68Q2NKX9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C2orf68Q2NKX9 AC010864.1-201ENST00000609407 1511 ntBASIC21.26■□□□□ 0.99
C2orf68Q2NKX9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C2orf68Q2NKX9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.26■□□□□ 0.99
C2orf68Q2NKX9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C2orf68Q2NKX9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C2orf68Q2NKX9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.25■□□□□ 0.99
C2orf68Q2NKX9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.25■□□□□ 0.99
C2orf68Q2NKX9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
C2orf68Q2NKX9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
C2orf68Q2NKX9 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.25■□□□□ 0.99
C2orf68Q2NKX9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C2orf68Q2NKX9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.25■□□□□ 0.99
C2orf68Q2NKX9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
C2orf68Q2NKX9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
C2orf68Q2NKX9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.23■□□□□ 0.99
C2orf68Q2NKX9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
C2orf68Q2NKX9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C2orf68Q2NKX9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
C2orf68Q2NKX9 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C2orf68Q2NKX9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.23■□□□□ 0.99
C2orf68Q2NKX9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
C2orf68Q2NKX9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
C2orf68Q2NKX9 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
C2orf68Q2NKX9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
C2orf68Q2NKX9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
C2orf68Q2NKX9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
C2orf68Q2NKX9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C2orf68Q2NKX9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
C2orf68Q2NKX9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
C2orf68Q2NKX9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C2orf68Q2NKX9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
C2orf68Q2NKX9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
C2orf68Q2NKX9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
C2orf68Q2NKX9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C2orf68Q2NKX9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
C2orf68Q2NKX9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
C2orf68Q2NKX9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
C2orf68Q2NKX9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
C2orf68Q2NKX9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
C2orf68Q2NKX9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
C2orf68Q2NKX9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
C2orf68Q2NKX9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.18■□□□□ 0.98
C2orf68Q2NKX9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
C2orf68Q2NKX9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.18■□□□□ 0.98
C2orf68Q2NKX9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.18■□□□□ 0.98
C2orf68Q2NKX9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
C2orf68Q2NKX9 ZNRF2P2-203ENST00000454624 420 ntBASIC21.17■□□□□ 0.98
C2orf68Q2NKX9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
C2orf68Q2NKX9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
C2orf68Q2NKX9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
C2orf68Q2NKX9 AC145676.1-201ENST00000514988 2004 ntBASIC21.16■□□□□ 0.98
C2orf68Q2NKX9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
C2orf68Q2NKX9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
C2orf68Q2NKX9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.14■□□□□ 0.98
C2orf68Q2NKX9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
C2orf68Q2NKX9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
C2orf68Q2NKX9 AP004833.2-201ENST00000532228 1454 ntBASIC21.13■□□□□ 0.97
C2orf68Q2NKX9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C2orf68Q2NKX9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.13■□□□□ 0.97
C2orf68Q2NKX9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
C2orf68Q2NKX9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C2orf68Q2NKX9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.13■□□□□ 0.97
C2orf68Q2NKX9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
C2orf68Q2NKX9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
C2orf68Q2NKX9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C2orf68Q2NKX9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
C2orf68Q2NKX9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
C2orf68Q2NKX9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
C2orf68Q2NKX9 WASH5P-204ENST00000632292 975 ntBASIC21.12■□□□□ 0.97
C2orf68Q2NKX9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
C2orf68Q2NKX9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.11■□□□□ 0.97
C2orf68Q2NKX9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.11■□□□□ 0.97
C2orf68Q2NKX9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
C2orf68Q2NKX9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms