Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXA3P55318 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXA3P55318 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXA3P55318 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXA3P55318 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXA3P55318 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXA3P55318 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXA3P55318 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXA3P55318 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXA3P55318 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
FOXA3P55318 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
FOXA3P55318 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXA3P55318 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXA3P55318 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
FOXA3P55318 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXA3P55318 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXA3P55318 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXA3P55318 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXA3P55318 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC18.72■□□□□ 0.59
FOXA3P55318 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.72■□□□□ 0.59
FOXA3P55318 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXA3P55318 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
FOXA3P55318 AC100797.4-201ENST00000631653 1827 ntBASIC18.72■□□□□ 0.59
FOXA3P55318 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXA3P55318 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
FOXA3P55318 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
FOXA3P55318 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.71■□□□□ 0.59
FOXA3P55318 AC093323.1-202ENST00000635031 2045 ntBASIC18.71■□□□□ 0.59
FOXA3P55318 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
FOXA3P55318 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
FOXA3P55318 AC127502.1-201ENST00000399971 1502 ntBASIC18.7■□□□□ 0.58
FOXA3P55318 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXA3P55318 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
FOXA3P55318 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.7■□□□□ 0.58
FOXA3P55318 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXA3P55318 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
FOXA3P55318 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXA3P55318 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXA3P55318 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXA3P55318 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXA3P55318 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXA3P55318 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXA3P55318 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXA3P55318 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXA3P55318 AL133380.1-201ENST00000506013 324 ntBASIC18.68■□□□□ 0.58
FOXA3P55318 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXA3P55318 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXA3P55318 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXA3P55318 DUSP8P4-201ENST00000399538 1761 ntBASIC18.67■□□□□ 0.58
FOXA3P55318 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXA3P55318 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXA3P55318 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXA3P55318 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
FOXA3P55318 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
FOXA3P55318 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXA3P55318 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXA3P55318 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.65■□□□□ 0.58
FOXA3P55318 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FOXA3P55318 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
FOXA3P55318 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXA3P55318 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.64■□□□□ 0.58
FOXA3P55318 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
FOXA3P55318 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
FOXA3P55318 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
FOXA3P55318 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
FOXA3P55318 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
FOXA3P55318 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXA3P55318 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FOXA3P55318 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FOXA3P55318 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXA3P55318 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXA3P55318 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FOXA3P55318 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FOXA3P55318 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXA3P55318 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
FOXA3P55318 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXA3P55318 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXA3P55318 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FOXA3P55318 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
FOXA3P55318 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
FOXA3P55318 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXA3P55318 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXA3P55318 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXA3P55318 AC018358.1-201ENST00000631079 1402 ntBASIC18.6■□□□□ 0.57
FOXA3P55318 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXA3P55318 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXA3P55318 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXA3P55318 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXA3P55318 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXA3P55318 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
FOXA3P55318 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FOXA3P55318 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
FOXA3P55318 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXA3P55318 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXA3P55318 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXA3P55318 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
FOXA3P55318 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXA3P55318 AC092803.2-201ENST00000564287 1899 ntBASIC18.58■□□□□ 0.56
FOXA3P55318 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXA3P55318 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms