Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.72■■□□□ 1.07
GDNFP39905 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GDNFP39905 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
GDNFP39905 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.71■■□□□ 1.07
GDNFP39905 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
GDNFP39905 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
GDNFP39905 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
GDNFP39905 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.71■■□□□ 1.07
GDNFP39905 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.71■■□□□ 1.07
GDNFP39905 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
GDNFP39905 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GDNFP39905 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.7■■□□□ 1.06
GDNFP39905 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
GDNFP39905 AC145676.1-201ENST00000514988 2004 ntBASIC21.7■■□□□ 1.06
GDNFP39905 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
GDNFP39905 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
GDNFP39905 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDNFP39905 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GDNFP39905 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.69■■□□□ 1.06
GDNFP39905 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDNFP39905 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GDNFP39905 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.68■■□□□ 1.06
GDNFP39905 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.68■■□□□ 1.06
GDNFP39905 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.68■■□□□ 1.06
GDNFP39905 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GDNFP39905 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.68■■□□□ 1.06
GDNFP39905 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.68■■□□□ 1.06
GDNFP39905 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GDNFP39905 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.68■■□□□ 1.06
GDNFP39905 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.68■■□□□ 1.06
GDNFP39905 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
GDNFP39905 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
GDNFP39905 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GDNFP39905 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDNFP39905 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDNFP39905 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDNFP39905 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.67■■□□□ 1.06
GDNFP39905 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
GDNFP39905 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
GDNFP39905 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDNFP39905 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDNFP39905 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GDNFP39905 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDNFP39905 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDNFP39905 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDNFP39905 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.65■■□□□ 1.06
GDNFP39905 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDNFP39905 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDNFP39905 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDNFP39905 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDNFP39905 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GDNFP39905 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
GDNFP39905 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.65■■□□□ 1.06
GDNFP39905 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.65■■□□□ 1.06
GDNFP39905 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDNFP39905 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDNFP39905 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
GDNFP39905 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.64■■□□□ 1.06
GDNFP39905 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDNFP39905 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
GDNFP39905 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GDNFP39905 AC093323.1-202ENST00000635031 2045 ntBASIC21.63■■□□□ 1.05
GDNFP39905 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
GDNFP39905 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.62■■□□□ 1.05
GDNFP39905 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
GDNFP39905 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GDNFP39905 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GDNFP39905 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
GDNFP39905 AC005559.1-201ENST00000589661 871 ntBASIC21.61■■□□□ 1.05
GDNFP39905 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GDNFP39905 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDNFP39905 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDNFP39905 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDNFP39905 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDNFP39905 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.6■■□□□ 1.05
GDNFP39905 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
GDNFP39905 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GDNFP39905 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
GDNFP39905 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GDNFP39905 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
GDNFP39905 DUX4L28-201ENST00000623687 678 ntBASIC21.59■■□□□ 1.05
GDNFP39905 AC100797.4-201ENST00000631653 1827 ntBASIC21.59■■□□□ 1.05
GDNFP39905 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
GDNFP39905 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GDNFP39905 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GDNFP39905 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
GDNFP39905 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GDNFP39905 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.58■■□□□ 1.04
GDNFP39905 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
GDNFP39905 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.57■■□□□ 1.04
GDNFP39905 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
GDNFP39905 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.57■■□□□ 1.04
GDNFP39905 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDNFP39905 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDNFP39905 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.56■■□□□ 1.04
GDNFP39905 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
GDNFP39905 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.56■■□□□ 1.04
GDNFP39905 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.56■■□□□ 1.04
GDNFP39905 AC127502.1-201ENST00000399971 1502 ntBASIC21.55■■□□□ 1.04
GDNFP39905 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms