Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 CDA1YLR307W 906 nt8.44□□□□□ -1.06
MSH3P25336 RPS6AYPL090C 711 nt8.44□□□□□ -1.06
MSH3P25336 PET20YPL159C 762 nt8.44□□□□□ -1.06
MSH3P25336 RPS6BYBR181C 711 nt8.44□□□□□ -1.06
MSH3P25336 PIC2YER053C 903 nt8.43□□□□□ -1.06
MSH3P25336 AVL9YLR114C 2295 nt8.43□□□□□ -1.06
MSH3P25336 ATP2YJR121W 1536 nt8.43□□□□□ -1.06
MSH3P25336 PDC5YLR134W 1692 nt8.43□□□□□ -1.06
MSH3P25336 YEL023CYEL023C 2049 nt8.42□□□□□ -1.06
MSH3P25336 YIA6YIL006W 1122 nt8.42□□□□□ -1.06
MSH3P25336 PMU1YKL128C 888 nt8.42□□□□□ -1.06
MSH3P25336 RIB1YBL033C 1038 nt8.42□□□□□ -1.06
MSH3P25336 NAT5YOR253W 531 nt8.42□□□□□ -1.06
MSH3P25336 PEX28YHR150W 1740 nt8.42□□□□□ -1.06
MSH3P25336 ARG7YMR062C 1326 nt8.41□□□□□ -1.06
MSH3P25336 CKB1YGL019W 837 nt8.41□□□□□ -1.06
MSH3P25336 TES1YJR019C 1050 nt8.41□□□□□ -1.06
MSH3P25336 RSC9YML127W 1746 nt8.4□□□□□ -1.06
MSH3P25336 ICE2YIL090W 1476 nt8.4□□□□□ -1.06
MSH3P25336 GUT1YHL032C 2130 nt8.4□□□□□ -1.06
MSH3P25336 YMR007WYMR007W 381 nt8.4□□□□□ -1.06
MSH3P25336 MLS1YNL117W 1665 nt8.39□□□□□ -1.07
MSH3P25336 SIR2YDL042C 1689 nt8.38□□□□□ -1.07
MSH3P25336 RUP1YOR138C 2016 nt8.38□□□□□ -1.07
MSH3P25336 DST1YGL043W 930 nt8.38□□□□□ -1.07
MSH3P25336 SOD2YHR008C 702 nt8.38□□□□□ -1.07
MSH3P25336 YBL081WYBL081W 1107 nt8.38□□□□□ -1.07
MSH3P25336 YPR084WYPR084W 1371 nt8.37□□□□□ -1.07
MSH3P25336 YMR206WYMR206W 942 nt8.37□□□□□ -1.07
MSH3P25336 BAP3YDR046C 1815 nt8.36□□□□□ -1.07
MSH3P25336 CBK1YNL161W 2271 nt8.36□□□□□ -1.07
MSH3P25336 ADH6YMR318C 1083 nt8.36□□□□□ -1.07
MSH3P25336 AOS1YPR180W 1044 nt8.36□□□□□ -1.07
MSH3P25336 RRT6YGL146C 936 nt8.35□□□□□ -1.07
MSH3P25336 CPR2YHR057C 618 nt8.35□□□□□ -1.07
MSH3P25336 MNN9YPL050C 1188 nt8.35□□□□□ -1.07
MSH3P25336 URE2YNL229C 1065 nt8.34□□□□□ -1.07
MSH3P25336 YCR061WYCR061W 1896 nt8.34□□□□□ -1.07
MSH3P25336 PPS1YBR276C 2424 nt8.33□□□□□ -1.08
MSH3P25336 BNA3YJL060W 1335 nt8.33□□□□□ -1.08
MSH3P25336 UTR5YEL035C 501 nt8.33□□□□□ -1.08
MSH3P25336 SNA3YJL151C 402 nt8.33□□□□□ -1.08
MSH3P25336 HAM1YJR069C 594 nt8.33□□□□□ -1.08
MSH3P25336 RCR1YBR005W 642 nt8.33□□□□□ -1.08
MSH3P25336 MOD5YOR274W 1287 nt8.33□□□□□ -1.08
MSH3P25336 YCR049CYCR049C 447 nt8.32□□□□□ -1.08
MSH3P25336 YER137CYER137C 447 nt8.32□□□□□ -1.08
MSH3P25336 Q0144Q0144 330 nt8.32□□□□□ -1.08
MSH3P25336 MFT1YML062C 1179 nt8.32□□□□□ -1.08
MSH3P25336 ICL2YPR006C 1728 nt8.32□□□□□ -1.08
MSH3P25336 NPL6YMR091C 1308 nt8.31□□□□□ -1.08
MSH3P25336 EDC3YEL015W 1656 nt8.31□□□□□ -1.08
MSH3P25336 OCA1YNL099C 717 nt8.31□□□□□ -1.08
MSH3P25336 AIM41YOR215C 558 nt8.31□□□□□ -1.08
MSH3P25336 YEL074WYEL074W 339 nt8.3□□□□□ -1.08
MSH3P25336 ACO1YLR304C 2337 nt8.3□□□□□ -1.08
MSH3P25336 YKR018CYKR018C 2178 nt8.29□□□□□ -1.08
MSH3P25336 STF1YDL130W-A 261 nt8.29□□□□□ -1.08
MSH3P25336 GET2YER083C 858 nt8.29□□□□□ -1.08
MSH3P25336 MRS3YJL133W 945 nt8.29□□□□□ -1.08
MSH3P25336 RCF2YNR018W 675 nt8.29□□□□□ -1.08
MSH3P25336 YPL277CYPL277C 1464 nt8.29□□□□□ -1.08
MSH3P25336 YOR389WYOR389W 1875 nt8.29□□□□□ -1.08
MSH3P25336 YHR033WYHR033W 1272 nt8.28□□□□□ -1.08
MSH3P25336 VPS65YLR322W 315 nt8.28□□□□□ -1.08
MSH3P25336 YBL113CYBL113C 2379 nt8.27□□□□□ -1.09
MSH3P25336 YHP1YDR451C 1062 nt8.27□□□□□ -1.09
MSH3P25336 YDR509WYDR509W 348 nt8.27□□□□□ -1.09
MSH3P25336 YIL168WYIL168W 384 nt8.27□□□□□ -1.09
MSH3P25336 SSC1YJR045C 1965 nt8.26□□□□□ -1.09
MSH3P25336 LEO1YOR123C 1395 nt8.26□□□□□ -1.09
MSH3P25336 YLR030WYLR030W 792 nt8.26□□□□□ -1.09
MSH3P25336 ADA2YDR448W 1305 nt8.26□□□□□ -1.09
MSH3P25336 PET10YKR046C 852 nt8.25□□□□□ -1.09
MSH3P25336 APT1YML022W 564 nt8.25□□□□□ -1.09
MSH3P25336 CMK2YOL016C 1344 nt8.25□□□□□ -1.09
MSH3P25336 STE3YKL178C 1413 nt8.24□□□□□ -1.09
MSH3P25336 YDR215CYDR215C 414 nt8.24□□□□□ -1.09
MSH3P25336 SNF7YLR025W 723 nt8.24□□□□□ -1.09
MSH3P25336 HEL1YKR017C 1656 nt8.24□□□□□ -1.09
MSH3P25336 TRR1YDR353W 960 nt8.23□□□□□ -1.09
MSH3P25336 ERV25YML012W 636 nt8.23□□□□□ -1.09
MSH3P25336 CWC25YNL245C 540 nt8.23□□□□□ -1.09
MSH3P25336 COA2YPL189C-A 207 nt8.23□□□□□ -1.09
MSH3P25336 HDA1YNL021W 2121 nt8.23□□□□□ -1.09
MSH3P25336 MMS21YEL019C 804 nt8.22□□□□□ -1.09
MSH3P25336 YPR150WYPR150W 522 nt8.22□□□□□ -1.09
MSH3P25336 CKI1YLR133W 1749 nt8.21□□□□□ -1.09
MSH3P25336 RRP1YDR087C 837 nt8.21□□□□□ -1.1
MSH3P25336 GNA1YFL017C 480 nt8.21□□□□□ -1.1
MSH3P25336 TDH1YJL052W 999 nt8.21□□□□□ -1.1
MSH3P25336 TCB1YOR086C 3561 nt8.21□□□□□ -1.1
MSH3P25336 YNL295WYNL295W 1575 nt8.2□□□□□ -1.1
MSH3P25336 YCR099CYCR099C 468 nt8.2□□□□□ -1.1
MSH3P25336 RPL12BYDR418W 498 nt8.2□□□□□ -1.1
MSH3P25336 YER152W-AYER152W-A 567 nt8.2□□□□□ -1.1
MSH3P25336 YHR145CYHR145C 357 nt8.2□□□□□ -1.1
MSH3P25336 TOS2YGR221C 1869 nt8.19□□□□□ -1.1
MSH3P25336 DAL80YKR034W 810 nt8.19□□□□□ -1.1
MSH3P25336 CAR2YLR438W 1275 nt8.19□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 27.7 ms