Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.47■■■□□ 2.31
ALDH1A1P00352 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC29.46■■■□□ 2.31
ALDH1A1P00352 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ALDH1A1P00352 BHLHE23-202ENST00000612929 1109 ntBASIC29.46■■■□□ 2.31
ALDH1A1P00352 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ALDH1A1P00352 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
ALDH1A1P00352 SMPD5-203ENST00000639008 1464 ntBASIC29.44■■■□□ 2.3
ALDH1A1P00352 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC29.44■■■□□ 2.3
ALDH1A1P00352 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
ALDH1A1P00352 AC131212.1-201ENST00000613771 668 ntBASIC29.44■■■□□ 2.3
ALDH1A1P00352 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
ALDH1A1P00352 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ALDH1A1P00352 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
ALDH1A1P00352 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ALDH1A1P00352 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ALDH1A1P00352 RP9P-202ENST00000450133 1212 ntBASIC29.43■■■□□ 2.3
ALDH1A1P00352 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC29.43■■■□□ 2.3
ALDH1A1P00352 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
ALDH1A1P00352 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.42■■■□□ 2.3
ALDH1A1P00352 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ALDH1A1P00352 AC009299.2-201ENST00000482477 511 ntBASIC29.42■■■□□ 2.3
ALDH1A1P00352 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
ALDH1A1P00352 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.42■■■□□ 2.3
ALDH1A1P00352 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.42■■■□□ 2.3
ALDH1A1P00352 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ALDH1A1P00352 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
ALDH1A1P00352 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
ALDH1A1P00352 AC026202.3-201ENST00000600805 1127 ntBASIC29.41■■■□□ 2.3
ALDH1A1P00352 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC29.41■■■□□ 2.3
ALDH1A1P00352 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.41■■■□□ 2.3
ALDH1A1P00352 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ALDH1A1P00352 HES6-204ENST00000409182 863 ntTSL 2 BASIC29.4■■■□□ 2.3
ALDH1A1P00352 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.4■■■□□ 2.3
ALDH1A1P00352 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
ALDH1A1P00352 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.4■■■□□ 2.3
ALDH1A1P00352 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.39■■■□□ 2.3
ALDH1A1P00352 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
ALDH1A1P00352 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC29.38■■■□□ 2.29
ALDH1A1P00352 AC010980.1-201ENST00000587192 1142 ntBASIC29.38■■■□□ 2.29
ALDH1A1P00352 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC29.37■■■□□ 2.29
ALDH1A1P00352 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
ALDH1A1P00352 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
ALDH1A1P00352 DUX4L9-201ENST00000449051 1259 ntBASIC29.37■■■□□ 2.29
ALDH1A1P00352 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.37■■■□□ 2.29
ALDH1A1P00352 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.37■■■□□ 2.29
ALDH1A1P00352 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC29.36■■■□□ 2.29
ALDH1A1P00352 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ALDH1A1P00352 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC29.36■■■□□ 2.29
ALDH1A1P00352 YBX1P4-201ENST00000392794 808 ntBASIC29.35■■■□□ 2.29
ALDH1A1P00352 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC29.35■■■□□ 2.29
ALDH1A1P00352 KRT8P33-201ENST00000508125 1423 ntBASIC29.35■■■□□ 2.29
ALDH1A1P00352 THA1P-201ENST00000590384 1145 ntBASIC29.34■■■□□ 2.29
ALDH1A1P00352 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
ALDH1A1P00352 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
ALDH1A1P00352 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ALDH1A1P00352 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
ALDH1A1P00352 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ALDH1A1P00352 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ALDH1A1P00352 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ALDH1A1P00352 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
ALDH1A1P00352 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.32■■■□□ 2.28
ALDH1A1P00352 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.32■■■□□ 2.28
ALDH1A1P00352 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.31■■■□□ 2.28
ALDH1A1P00352 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.3■■■□□ 2.28
ALDH1A1P00352 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ALDH1A1P00352 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ALDH1A1P00352 GUSBP5-201ENST00000418136 578 ntBASIC29.3■■■□□ 2.28
ALDH1A1P00352 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
ALDH1A1P00352 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
ALDH1A1P00352 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.29■■■□□ 2.28
ALDH1A1P00352 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
ALDH1A1P00352 AC139795.1-202ENST00000500444 432 ntBASIC29.29■■■□□ 2.28
ALDH1A1P00352 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
ALDH1A1P00352 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
ALDH1A1P00352 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
ALDH1A1P00352 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ALDH1A1P00352 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ALDH1A1P00352 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
ALDH1A1P00352 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.28■■■□□ 2.28
ALDH1A1P00352 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
ALDH1A1P00352 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.27■■■□□ 2.28
ALDH1A1P00352 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
ALDH1A1P00352 OR2A1-AS1-204ENST00000470435 602 ntBASIC29.26■■■□□ 2.27
ALDH1A1P00352 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
ALDH1A1P00352 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
ALDH1A1P00352 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
ALDH1A1P00352 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC29.25■■■□□ 2.27
ALDH1A1P00352 HYI-210ENST00000486909 905 ntTSL 5 BASIC29.25■■■□□ 2.27
ALDH1A1P00352 AC025884.2-201ENST00000553429 711 ntBASIC29.25■■■□□ 2.27
ALDH1A1P00352 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
ALDH1A1P00352 AC103834.1-201ENST00000520383 144 ntBASIC29.24■■■□□ 2.27
ALDH1A1P00352 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
ALDH1A1P00352 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
ALDH1A1P00352 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
ALDH1A1P00352 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.23■■■□□ 2.27
ALDH1A1P00352 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ALDH1A1P00352 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
ALDH1A1P00352 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC29.22■■■□□ 2.27
ALDH1A1P00352 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.22■■■□□ 2.27
ALDH1A1P00352 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms