Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDEFO95238 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.06■□□□□ 0.96
SPDEFO95238 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDEFO95238 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDEFO95238 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.05■□□□□ 0.96
SPDEFO95238 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.05■□□□□ 0.96
SPDEFO95238 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SPDEFO95238 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDEFO95238 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SPDEFO95238 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SPDEFO95238 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SPDEFO95238 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDEFO95238 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPDEFO95238 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDEFO95238 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPDEFO95238 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.04■□□□□ 0.96
SPDEFO95238 AC091060.1-201ENST00000623524 1766 ntBASIC21.04■□□□□ 0.96
SPDEFO95238 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SPDEFO95238 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPDEFO95238 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SPDEFO95238 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 MIR762-201ENST00000390236 83 ntBASIC21.03■□□□□ 0.96
SPDEFO95238 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.03■□□□□ 0.96
SPDEFO95238 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
SPDEFO95238 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPDEFO95238 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.03■□□□□ 0.96
SPDEFO95238 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.02■□□□□ 0.96
SPDEFO95238 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPDEFO95238 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.02■□□□□ 0.96
SPDEFO95238 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDEFO95238 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPDEFO95238 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SPDEFO95238 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPDEFO95238 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
SPDEFO95238 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPDEFO95238 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.01■□□□□ 0.95
SPDEFO95238 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SPDEFO95238 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21■□□□□ 0.95
SPDEFO95238 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21■□□□□ 0.95
SPDEFO95238 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SPDEFO95238 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SPDEFO95238 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.98■□□□□ 0.95
SPDEFO95238 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SPDEFO95238 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDEFO95238 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDEFO95238 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SPDEFO95238 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.97■□□□□ 0.95
SPDEFO95238 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.97■□□□□ 0.95
SPDEFO95238 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDEFO95238 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SPDEFO95238 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SPDEFO95238 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SPDEFO95238 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDEFO95238 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDEFO95238 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SPDEFO95238 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDEFO95238 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDEFO95238 AC005559.1-201ENST00000589661 871 ntBASIC20.95■□□□□ 0.94
SPDEFO95238 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SPDEFO95238 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDEFO95238 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SPDEFO95238 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDEFO95238 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.95■□□□□ 0.94
SPDEFO95238 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPDEFO95238 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDEFO95238 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SPDEFO95238 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SPDEFO95238 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDEFO95238 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDEFO95238 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SPDEFO95238 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SPDEFO95238 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDEFO95238 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDEFO95238 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SPDEFO95238 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDEFO95238 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDEFO95238 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SPDEFO95238 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDEFO95238 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SPDEFO95238 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
SPDEFO95238 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDEFO95238 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPDEFO95238 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SPDEFO95238 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDEFO95238 LINC01003-201ENST00000564834 1764 ntBASIC20.9■□□□□ 0.94
SPDEFO95238 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.89■□□□□ 0.94
SPDEFO95238 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms