Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC28.53■■■□□ 2.16
TNRC18O15417 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
TNRC18O15417 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.52■■■□□ 2.16
TNRC18O15417 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
TNRC18O15417 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
TNRC18O15417 AC104564.3-201ENST00000582367 638 ntBASIC28.5■■■□□ 2.15
TNRC18O15417 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TNRC18O15417 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TNRC18O15417 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC28.5■■■□□ 2.15
TNRC18O15417 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
TNRC18O15417 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TNRC18O15417 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TNRC18O15417 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.49■■■□□ 2.15
TNRC18O15417 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TNRC18O15417 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
TNRC18O15417 SMPD5-203ENST00000639008 1464 ntBASIC28.48■■■□□ 2.15
TNRC18O15417 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.48■■■□□ 2.15
TNRC18O15417 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.48■■■□□ 2.15
TNRC18O15417 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TNRC18O15417 AC074183.2-201ENST00000623112 922 ntBASIC28.47■■■□□ 2.15
TNRC18O15417 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.47■■■□□ 2.15
TNRC18O15417 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TNRC18O15417 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TNRC18O15417 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
TNRC18O15417 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
TNRC18O15417 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
TNRC18O15417 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.46■■■□□ 2.15
TNRC18O15417 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TNRC18O15417 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
TNRC18O15417 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
TNRC18O15417 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
TNRC18O15417 Z92544.1-202ENST00000571933 1220 ntBASIC28.45■■■□□ 2.15
TNRC18O15417 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC28.45■■■□□ 2.14
TNRC18O15417 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.44■■■□□ 2.14
TNRC18O15417 AC026271.2-201ENST00000428091 497 ntBASIC28.44■■■□□ 2.14
TNRC18O15417 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TNRC18O15417 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
TNRC18O15417 RNF146-205ENST00000477776 762 ntTSL 3 BASIC28.42■■■□□ 2.14
TNRC18O15417 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.42■■■□□ 2.14
TNRC18O15417 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC28.41■■■□□ 2.14
TNRC18O15417 AC139795.1-202ENST00000500444 432 ntBASIC28.41■■■□□ 2.14
TNRC18O15417 AC026202.3-201ENST00000600805 1127 ntBASIC28.41■■■□□ 2.14
TNRC18O15417 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
TNRC18O15417 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
TNRC18O15417 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.39■■■□□ 2.14
TNRC18O15417 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.39■■■□□ 2.14
TNRC18O15417 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.39■■■□□ 2.14
TNRC18O15417 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
TNRC18O15417 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
TNRC18O15417 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TNRC18O15417 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.38■■■□□ 2.13
TNRC18O15417 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TNRC18O15417 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.38■■■□□ 2.13
TNRC18O15417 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TNRC18O15417 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TNRC18O15417 CREM-229ENST00000474362 1030 ntTSL 2 BASIC28.35■■■□□ 2.13
TNRC18O15417 AL031848.2-201ENST00000607670 837 ntBASIC28.35■■■□□ 2.13
TNRC18O15417 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TNRC18O15417 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
TNRC18O15417 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TNRC18O15417 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TNRC18O15417 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.34■■■□□ 2.13
TNRC18O15417 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC28.34■■■□□ 2.13
TNRC18O15417 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
TNRC18O15417 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.34■■■□□ 2.13
TNRC18O15417 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC28.34■■■□□ 2.13
TNRC18O15417 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC28.34■■■□□ 2.13
TNRC18O15417 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.33■■■□□ 2.13
TNRC18O15417 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TNRC18O15417 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.33■■■□□ 2.13
TNRC18O15417 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC28.32■■■□□ 2.12
TNRC18O15417 NALT1-201ENST00000429224 738 ntTSL 5 BASIC28.32■■■□□ 2.12
TNRC18O15417 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TNRC18O15417 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.32■■■□□ 2.12
TNRC18O15417 AC131281.2-201ENST00000520478 145 ntBASIC28.31■■■□□ 2.12
TNRC18O15417 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC28.31■■■□□ 2.12
TNRC18O15417 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TNRC18O15417 AC110285.6-201ENST00000617652 491 ntBASIC28.31■■■□□ 2.12
TNRC18O15417 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TNRC18O15417 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
TNRC18O15417 RAP2CP1-202ENST00000605179 643 ntBASIC28.3■■■□□ 2.12
TNRC18O15417 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC28.3■■■□□ 2.12
TNRC18O15417 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
TNRC18O15417 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
TNRC18O15417 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.29■■■□□ 2.12
TNRC18O15417 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
TNRC18O15417 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TNRC18O15417 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TNRC18O15417 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC28.28■■■□□ 2.12
TNRC18O15417 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.28■■■□□ 2.12
TNRC18O15417 AC120057.4-201ENST00000624722 1615 ntBASIC28.28■■■□□ 2.12
TNRC18O15417 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.27■■■□□ 2.12
TNRC18O15417 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TNRC18O15417 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TNRC18O15417 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.27■■■□□ 2.12
TNRC18O15417 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
TNRC18O15417 WHAMMP2-203ENST00000563942 1603 ntBASIC28.26■■■□□ 2.11
TNRC18O15417 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.26■■■□□ 2.11
TNRC18O15417 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.26■■■□□ 2.11
TNRC18O15417 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms