Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIRPB1O00241 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SIRPB1O00241 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SIRPB1O00241 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
SIRPB1O00241 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.16■□□□□ 0.98
SIRPB1O00241 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.16■□□□□ 0.98
SIRPB1O00241 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SIRPB1O00241 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SIRPB1O00241 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SIRPB1O00241 AC110285.7-201ENST00000624417 1536 ntBASIC21.15■□□□□ 0.98
SIRPB1O00241 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SIRPB1O00241 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIRPB1O00241 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIRPB1O00241 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.15■□□□□ 0.98
SIRPB1O00241 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SIRPB1O00241 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SIRPB1O00241 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIRPB1O00241 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.14■□□□□ 0.97
SIRPB1O00241 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.14■□□□□ 0.97
SIRPB1O00241 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SIRPB1O00241 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.14■□□□□ 0.97
SIRPB1O00241 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.13■□□□□ 0.97
SIRPB1O00241 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SIRPB1O00241 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.13■□□□□ 0.97
SIRPB1O00241 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIRPB1O00241 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SIRPB1O00241 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SIRPB1O00241 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIRPB1O00241 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SIRPB1O00241 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SIRPB1O00241 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIRPB1O00241 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SIRPB1O00241 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIRPB1O00241 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIRPB1O00241 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIRPB1O00241 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SIRPB1O00241 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
SIRPB1O00241 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SIRPB1O00241 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.1■□□□□ 0.97
SIRPB1O00241 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SIRPB1O00241 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SIRPB1O00241 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SIRPB1O00241 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIRPB1O00241 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIRPB1O00241 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
SIRPB1O00241 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SIRPB1O00241 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIRPB1O00241 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
SIRPB1O00241 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SIRPB1O00241 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SIRPB1O00241 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIRPB1O00241 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIRPB1O00241 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SIRPB1O00241 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIRPB1O00241 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIRPB1O00241 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.07■□□□□ 0.96
SIRPB1O00241 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.07■□□□□ 0.96
SIRPB1O00241 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIRPB1O00241 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIRPB1O00241 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIRPB1O00241 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIRPB1O00241 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SIRPB1O00241 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.06■□□□□ 0.96
SIRPB1O00241 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.06■□□□□ 0.96
SIRPB1O00241 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIRPB1O00241 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.06■□□□□ 0.96
SIRPB1O00241 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SIRPB1O00241 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SIRPB1O00241 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SIRPB1O00241 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.05■□□□□ 0.96
SIRPB1O00241 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIRPB1O00241 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC21.04■□□□□ 0.96
SIRPB1O00241 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.04■□□□□ 0.96
SIRPB1O00241 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SIRPB1O00241 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIRPB1O00241 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIRPB1O00241 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIRPB1O00241 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIRPB1O00241 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SIRPB1O00241 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.02■□□□□ 0.96
SIRPB1O00241 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIRPB1O00241 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.02■□□□□ 0.96
SIRPB1O00241 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SIRPB1O00241 LINC01971-201ENST00000617888 1048 ntBASIC21.02■□□□□ 0.96
SIRPB1O00241 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SIRPB1O00241 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.02■□□□□ 0.96
SIRPB1O00241 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.02■□□□□ 0.96
SIRPB1O00241 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.02■□□□□ 0.95
SIRPB1O00241 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SIRPB1O00241 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.01■□□□□ 0.95
SIRPB1O00241 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.01■□□□□ 0.95
SIRPB1O00241 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.01■□□□□ 0.95
SIRPB1O00241 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIRPB1O00241 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21■□□□□ 0.95
SIRPB1O00241 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SIRPB1O00241 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21■□□□□ 0.95
SIRPB1O00241 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SIRPB1O00241 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21■□□□□ 0.95
SIRPB1O00241 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SIRPB1O00241 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms